BLASTX nr result

ID: Dioscorea21_contig00016412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016412
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28414.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin...    65   4e-09
emb|CBI17184.3| unnamed protein product [Vitis vinifera]               65   6e-09
ref|XP_002274487.1| PREDICTED: zinc finger CCCH domain-containin...    65   6e-09
emb|CAN62156.1| hypothetical protein VITISV_021251 [Vitis vinifera]    65   6e-09

>emb|CBI28414.3| unnamed protein product [Vitis vinifera]
          Length = 525

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/77 (48%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = -1

Query: 233 TRMEISSCTKIILGRLQKLEPENAQRIMGYLLL-SHTQEEMIDYAIGPDSQIHELINEAK 57
           T M+ S  TK++  R+QKLEPEN  +I+GYLLL  H + +MI  A   D+ I  LIN+AK
Sbjct: 12  TDMDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQCLINKAK 71

Query: 56  TCLASSVNVAASSPTQP 6
             L  S   A SSP  P
Sbjct: 72  AELGLSSKPAVSSPISP 88


>ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Vitis vinifera]
          Length = 572

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
 Frame = -1

Query: 227 MEISSCTKIILGRLQKLEPENAQRIMGYLLL-SHTQEEMIDYAIGPDSQIHELINEAKTC 51
           M+ S  TK++  R+QKLEPEN  +I+GYLLL  H + +MI  A   D+ I  LIN+AK  
Sbjct: 1   MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQCLINKAKAE 60

Query: 50  LASSVNVAASSPTQP 6
           L  S   A SSP  P
Sbjct: 61  LGLSSKPAVSSPISP 75


>emb|CBI17184.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
 Frame = -1

Query: 227 MEISSCTKIILGRLQKLEPENAQRIMGYLLL--SHTQEEMIDYAIGPDSQIHELINEAKT 54
           M+    T+I+  R+Q L+PENA +IMGY+LL   H ++EMI  A GP++ +H LI +AKT
Sbjct: 1   MDSYEATRIVFSRIQALDPENASKIMGYILLIQDHGEKEMIRLAFGPETLLHNLILKAKT 60

Query: 53  CLASSVNVAASSPTQP 6
            L    N   S+PT P
Sbjct: 61  QLGILSN-TPSTPTSP 75


>ref|XP_002274487.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           [Vitis vinifera]
          Length = 695

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
 Frame = -1

Query: 227 MEISSCTKIILGRLQKLEPENAQRIMGYLLL--SHTQEEMIDYAIGPDSQIHELINEAKT 54
           M+    T+I+  R+Q L+PENA +IMGY+LL   H ++EMI  A GP++ +H LI +AKT
Sbjct: 1   MDSYEATRIVFSRIQALDPENASKIMGYILLIQDHGEKEMIRLAFGPETLLHNLILKAKT 60

Query: 53  CLASSVNVAASSPTQP 6
            L    N   S+PT P
Sbjct: 61  QLGILSN-TPSTPTSP 75


>emb|CAN62156.1| hypothetical protein VITISV_021251 [Vitis vinifera]
          Length = 697

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
 Frame = -1

Query: 227 MEISSCTKIILGRLQKLEPENAQRIMGYLLL--SHTQEEMIDYAIGPDSQIHELINEAKT 54
           M+    T+I+  R+Q L+PENA +IMGY+LL   H ++EMI  A GP++ +H LI +AKT
Sbjct: 1   MDSYEATRIVFSRIQALDPENASKIMGYILLIQDHGEKEMIRLAFGPETLLHNLILKAKT 60

Query: 53  CLASSVNVAASSPTQP 6
            L    N   S+PT P
Sbjct: 61  QLGILSN-TPSTPTSP 75


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