BLASTX nr result

ID: Dioscorea21_contig00016392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016392
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329574.1| predicted protein [Populus trichocarpa] gi|2...   216   3e-54
ref|NP_181079.1| ubiquitin-like protein [Arabidopsis thaliana] g...   207   2e-51
ref|XP_002881393.1| ubiquitin family protein [Arabidopsis lyrata...   206   3e-51
ref|NP_001235343.1| uncharacterized protein LOC100499994 [Glycin...   206   3e-51
ref|XP_002280752.1| PREDICTED: uncharacterized protein LOC100254...   205   5e-51

>ref|XP_002329574.1| predicted protein [Populus trichocarpa] gi|222870283|gb|EEF07414.1|
           predicted protein [Populus trichocarpa]
          Length = 230

 Score =  216 bits (549), Expect = 3e-54
 Identities = 99/122 (81%), Positives = 114/122 (93%)
 Frame = -1

Query: 608 DDEDDDLKFRIPTSASRWRRRLFYFLRDKLRVPDILLMAIFSISLKAWACIILWFSLAPV 429
           DD+DDDLKF++P SASRW+RRL++FL DKL++PDILLM +FS+SLKAWA  ILWF LAPV
Sbjct: 109 DDDDDDLKFQLPQSASRWKRRLYFFLHDKLKLPDILLMGLFSLSLKAWAVFILWFILAPV 168

Query: 428 AHRWDLGPVYILVTGFLIIILNLGKRQHGDLSAYSIFNEDFRELPGTLNADRLDRDIRAG 249
           AHRWDLGP+YI+ TGF+II+LNLG+RQ GDLSAYSIFNEDFRELPGTLNADRLDRDIRAG
Sbjct: 169 AHRWDLGPIYIIGTGFVIILLNLGRRQAGDLSAYSIFNEDFRELPGTLNADRLDRDIRAG 228

Query: 248 QF 243
           QF
Sbjct: 229 QF 230


>ref|NP_181079.1| ubiquitin-like protein [Arabidopsis thaliana]
           gi|3608152|gb|AAC36185.1| hypothetical protein
           [Arabidopsis thaliana] gi|28206852|gb|AAO37158.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|50058867|gb|AAT69178.1| hypothetical protein
           At2g35360 [Arabidopsis thaliana]
           gi|330254005|gb|AEC09099.1| ubiquitin-like protein
           [Arabidopsis thaliana]
          Length = 225

 Score =  207 bits (526), Expect = 2e-51
 Identities = 93/122 (76%), Positives = 111/122 (90%)
 Frame = -1

Query: 611 DDDEDDDLKFRIPTSASRWRRRLFYFLRDKLRVPDILLMAIFSISLKAWACIILWFSLAP 432
           DDD+DDDLKF++P SASRW+R+L+YFLR+KL++PDI+LM +FS+SLK W  I LWF LAP
Sbjct: 103 DDDDDDDLKFKLPPSASRWKRKLYYFLRNKLKLPDIILMGLFSLSLKMWVIITLWFILAP 162

Query: 431 VAHRWDLGPVYILVTGFLIIILNLGKRQHGDLSAYSIFNEDFRELPGTLNADRLDRDIRA 252
           +AHRWDLGP++IL TGF II+LNLGKRQ GD+SAYSIFNEDFRELPGT NADR+DRDIRA
Sbjct: 163 IAHRWDLGPIFILGTGFSIILLNLGKRQPGDVSAYSIFNEDFRELPGTYNADRIDRDIRA 222

Query: 251 GQ 246
           GQ
Sbjct: 223 GQ 224


>ref|XP_002881393.1| ubiquitin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327232|gb|EFH57652.1| ubiquitin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 226

 Score =  206 bits (523), Expect = 3e-51
 Identities = 92/122 (75%), Positives = 111/122 (90%)
 Frame = -1

Query: 611 DDDEDDDLKFRIPTSASRWRRRLFYFLRDKLRVPDILLMAIFSISLKAWACIILWFSLAP 432
           DDD+DDDLKF++P SASRW+R+ +YFLR+KL++PDI+LM +FS+SLK W  IILWF LAP
Sbjct: 104 DDDDDDDLKFKLPPSASRWKRKFYYFLRNKLKLPDIILMGLFSLSLKMWVIIILWFILAP 163

Query: 431 VAHRWDLGPVYILVTGFLIIILNLGKRQHGDLSAYSIFNEDFRELPGTLNADRLDRDIRA 252
           +AHRWDLGP++IL TGF II+LNLGKRQ GD+SAYSIFNEDFRELPGT NA+R+DRDIRA
Sbjct: 164 IAHRWDLGPIFILGTGFSIILLNLGKRQPGDVSAYSIFNEDFRELPGTYNAERIDRDIRA 223

Query: 251 GQ 246
           GQ
Sbjct: 224 GQ 225


>ref|NP_001235343.1| uncharacterized protein LOC100499994 [Glycine max]
           gi|255628389|gb|ACU14539.1| unknown [Glycine max]
          Length = 224

 Score =  206 bits (523), Expect = 3e-51
 Identities = 95/123 (77%), Positives = 110/123 (89%)
 Frame = -1

Query: 611 DDDEDDDLKFRIPTSASRWRRRLFYFLRDKLRVPDILLMAIFSISLKAWACIILWFSLAP 432
           +DDED+DLKFR+P S+S W++RL+ FL D L++PDILLM IF++SLKAW  IILWF LAP
Sbjct: 102 NDDEDEDLKFRLPQSSSWWKKRLYTFLHDNLKLPDILLMVIFTLSLKAWLLIILWFILAP 161

Query: 431 VAHRWDLGPVYILVTGFLIIILNLGKRQHGDLSAYSIFNEDFRELPGTLNADRLDRDIRA 252
           VAHRWDLGP+YIL TGF +I+ NLGKRQ GD+SAYSIFNEDFRELPGTLNADRLDRDIRA
Sbjct: 162 VAHRWDLGPLYILTTGFCLILFNLGKRQAGDISAYSIFNEDFRELPGTLNADRLDRDIRA 221

Query: 251 GQF 243
           GQF
Sbjct: 222 GQF 224


>ref|XP_002280752.1| PREDICTED: uncharacterized protein LOC100254109 [Vitis vinifera]
          Length = 231

 Score =  205 bits (522), Expect = 5e-51
 Identities = 93/123 (75%), Positives = 111/123 (90%)
 Frame = -1

Query: 611 DDDEDDDLKFRIPTSASRWRRRLFYFLRDKLRVPDILLMAIFSISLKAWACIILWFSLAP 432
           D+D+DD+LKF++P S SRW+R+LF FL DKL++PDI+LMAIFS+SLK W  I+ WF LAP
Sbjct: 109 DEDDDDNLKFQLPQSTSRWKRKLFCFLHDKLKLPDIILMAIFSLSLKMWVLIVTWFILAP 168

Query: 431 VAHRWDLGPVYILVTGFLIIILNLGKRQHGDLSAYSIFNEDFRELPGTLNADRLDRDIRA 252
           VAHRWDLGP+YIL TGF II +NLG+R+HGD+SAYSIFNEDFRELPGTLNADRLD+DIRA
Sbjct: 169 VAHRWDLGPLYILGTGFCIIFVNLGQRKHGDISAYSIFNEDFRELPGTLNADRLDQDIRA 228

Query: 251 GQF 243
           GQF
Sbjct: 229 GQF 231


Top