BLASTX nr result

ID: Dioscorea21_contig00016386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016386
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240088.1| uncharacterized protein LOC100786260 [Glycin...    87   2e-15
ref|XP_003577951.1| PREDICTED: chlorophyll a-b binding protein 1...    86   4e-15
ref|XP_002307004.1| light-harvesting complex II protein Lhcb7 [P...    86   4e-15
ref|XP_004145567.1| PREDICTED: chlorophyll a-b binding protein o...    85   6e-15
ref|NP_001062801.1| Os09g0296800 [Oryza sativa Japonica Group] g...    85   6e-15

>ref|NP_001240088.1| uncharacterized protein LOC100786260 [Glycine max]
           gi|255636882|gb|ACU18774.1| unknown [Glycine max]
          Length = 331

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 38/42 (90%), Positives = 41/42 (97%)
 Frame = -2

Query: 533 KEIKNGRLAMVAWLGFYLQAALTGKGPIQNLLDHISDPLHNN 408
           KEIKNGRLAMVAWLGFY+QAALTGKGP+QNL+DHISDP HNN
Sbjct: 278 KEIKNGRLAMVAWLGFYVQAALTGKGPVQNLIDHISDPFHNN 319


>ref|XP_003577951.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
           [Brachypodium distachyon]
          Length = 318

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 37/42 (88%), Positives = 42/42 (100%)
 Frame = -2

Query: 533 KEIKNGRLAMVAWLGFYLQAALTGKGPIQNLLDHISDPLHNN 408
           KEIKNGRLAMVAWLGFYLQAA+TGKGP+QNL++H+SDPLHNN
Sbjct: 271 KEIKNGRLAMVAWLGFYLQAAVTGKGPVQNLVEHLSDPLHNN 312


>ref|XP_002307004.1| light-harvesting complex II protein Lhcb7 [Populus trichocarpa]
           gi|222856453|gb|EEE94000.1| light-harvesting complex II
           protein Lhcb7 [Populus trichocarpa]
          Length = 338

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 37/42 (88%), Positives = 42/42 (100%)
 Frame = -2

Query: 533 KEIKNGRLAMVAWLGFYLQAALTGKGPIQNLLDHISDPLHNN 408
           KEIKNGRLAMVAWLGFY+QAALTGKGP++NL++HISDPLHNN
Sbjct: 289 KEIKNGRLAMVAWLGFYIQAALTGKGPVENLVEHISDPLHNN 330


>ref|XP_004145567.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic-like [Cucumis sativus]
          Length = 338

 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 38/42 (90%), Positives = 40/42 (95%)
 Frame = -2

Query: 533 KEIKNGRLAMVAWLGFYLQAALTGKGPIQNLLDHISDPLHNN 408
           KEIKNGRLAMVAWLGFY QAALTGKGP+QNLLDHI+DP HNN
Sbjct: 286 KEIKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHIADPFHNN 327


>ref|NP_001062801.1| Os09g0296800 [Oryza sativa Japonica Group]
           gi|50725078|dbj|BAD33211.1| putative chlorophyll
           a/b-binding protein [Oryza sativa Japonica Group]
           gi|113631034|dbj|BAF24715.1| Os09g0296800 [Oryza sativa
           Japonica Group]
          Length = 321

 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 37/42 (88%), Positives = 42/42 (100%)
 Frame = -2

Query: 533 KEIKNGRLAMVAWLGFYLQAALTGKGPIQNLLDHISDPLHNN 408
           KEIKNGRLAMVAWLGFY+QAA+TGKGPIQNL++H+SDPLHNN
Sbjct: 274 KEIKNGRLAMVAWLGFYIQAAVTGKGPIQNLVEHLSDPLHNN 315


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