BLASTX nr result

ID: Dioscorea21_contig00016382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016382
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605072.1| ATP-dependent DNA helicase 2 subunit [Medica...   279   2e-73
ref|XP_002320725.1| predicted protein [Populus trichocarpa] gi|2...   278   3e-73
gb|AAL87543.1|AF293343_1 KAP-2 [Medicago truncatula]                  276   2e-72
emb|CAN68627.1| hypothetical protein VITISV_004463 [Vitis vinifera]   270   9e-71
ref|XP_003524779.1| PREDICTED: ATP-dependent DNA helicase 2 subu...   270   1e-70

>ref|XP_003605072.1| ATP-dependent DNA helicase 2 subunit [Medicago truncatula]
           gi|355506127|gb|AES87269.1| ATP-dependent DNA helicase 2
           subunit [Medicago truncatula]
          Length = 683

 Score =  279 bits (713), Expect = 2e-73
 Identities = 129/161 (80%), Positives = 149/161 (92%)
 Frame = +2

Query: 2   KKYSDKAPSSDKYATHEVKVDFEYKSKEDPDKVVPPEQRIKGYRYGPQVIPISSAEWDSV 181
           KK+SDKAP +DK+ATHEVKVD+EYKS  DPDKVVPP+QRIKGYRYGPQ+IPISSAEWD+V
Sbjct: 248 KKFSDKAPQTDKFATHEVKVDYEYKSSADPDKVVPPDQRIKGYRYGPQIIPISSAEWDAV 307

Query: 182 KLKPDKGVKLLGFTDSSNIKRHYYMKDVYTFIPEPGNRKAIVAVSAIAQAMKELNKVAIL 361
           K KP+KGVKLLGFTDSSNI RH YMKDVY FI EPGN KA++AVSA+++AMKE+NKVAIL
Sbjct: 308 KFKPEKGVKLLGFTDSSNILRHQYMKDVYVFIAEPGNTKAVLAVSALSRAMKEMNKVAIL 367

Query: 362 RCVWKQGQGSVVIGILSPNVSCMDNIPDSFYFNILPFAEDV 484
           RCVW+QGQ +VVIG+L+PNVS  +N+PDSFYFNILPFAEDV
Sbjct: 368 RCVWRQGQANVVIGVLTPNVSDRENLPDSFYFNILPFAEDV 408


>ref|XP_002320725.1| predicted protein [Populus trichocarpa] gi|222861498|gb|EEE99040.1|
           predicted protein [Populus trichocarpa]
          Length = 700

 Score =  278 bits (711), Expect = 3e-73
 Identities = 128/161 (79%), Positives = 149/161 (92%)
 Frame = +2

Query: 2   KKYSDKAPSSDKYATHEVKVDFEYKSKEDPDKVVPPEQRIKGYRYGPQVIPISSAEWDSV 181
           KKYSDKAP +D++ATHEVKVD+EYKS EDP+KVVPPEQRIKGYRYGPQV+PISSAEWD+V
Sbjct: 266 KKYSDKAPPTDRFATHEVKVDYEYKSVEDPNKVVPPEQRIKGYRYGPQVVPISSAEWDAV 325

Query: 182 KLKPDKGVKLLGFTDSSNIKRHYYMKDVYTFIPEPGNRKAIVAVSAIAQAMKELNKVAIL 361
           K KP+K VKLLGFTD+SNI RHYYMKDV  FIPEPGN +A +AVSA+A+AMKE+NKVAIL
Sbjct: 326 KFKPEKSVKLLGFTDASNIMRHYYMKDVNVFIPEPGNARAALAVSALARAMKEMNKVAIL 385

Query: 362 RCVWKQGQGSVVIGILSPNVSCMDNIPDSFYFNILPFAEDV 484
           RCVW+QGQGSVV+G+L+PN+S  D+ PDSFYFN+LPFAEDV
Sbjct: 386 RCVWRQGQGSVVVGVLTPNISEKDSTPDSFYFNVLPFAEDV 426


>gb|AAL87543.1|AF293343_1 KAP-2 [Medicago truncatula]
          Length = 683

 Score =  276 bits (705), Expect = 2e-72
 Identities = 128/161 (79%), Positives = 148/161 (91%)
 Frame = +2

Query: 2   KKYSDKAPSSDKYATHEVKVDFEYKSKEDPDKVVPPEQRIKGYRYGPQVIPISSAEWDSV 181
           KK+SDKAP +DK+ATHEVKVD+EYKS  DPD VVPP+QRIKGYRYGPQ+IPISSAEWD+V
Sbjct: 248 KKFSDKAPQTDKFATHEVKVDYEYKSSADPDIVVPPDQRIKGYRYGPQIIPISSAEWDAV 307

Query: 182 KLKPDKGVKLLGFTDSSNIKRHYYMKDVYTFIPEPGNRKAIVAVSAIAQAMKELNKVAIL 361
           K KP+KGVKLLGFTDSSNI RH YMKDVY FI EPGN KA++AVSA+++AMKE+NKVAIL
Sbjct: 308 KFKPEKGVKLLGFTDSSNILRHQYMKDVYVFIAEPGNTKAVLAVSALSRAMKEMNKVAIL 367

Query: 362 RCVWKQGQGSVVIGILSPNVSCMDNIPDSFYFNILPFAEDV 484
           RCVW+QGQ +VVIG+L+PNVS  +N+PDSFYFNILPFAEDV
Sbjct: 368 RCVWRQGQANVVIGVLTPNVSDRENLPDSFYFNILPFAEDV 408


>emb|CAN68627.1| hypothetical protein VITISV_004463 [Vitis vinifera]
          Length = 812

 Score =  270 bits (690), Expect = 9e-71
 Identities = 127/161 (78%), Positives = 147/161 (91%)
 Frame = +2

Query: 2   KKYSDKAPSSDKYATHEVKVDFEYKSKEDPDKVVPPEQRIKGYRYGPQVIPISSAEWDSV 181
           K+YSD+AP +DK+ATHEVKVDFEYKS E+  KVVPPEQRIKGYRYGPQVIPISSAEW++V
Sbjct: 363 KQYSDQAPPTDKFATHEVKVDFEYKSVEESSKVVPPEQRIKGYRYGPQVIPISSAEWEAV 422

Query: 182 KLKPDKGVKLLGFTDSSNIKRHYYMKDVYTFIPEPGNRKAIVAVSAIAQAMKELNKVAIL 361
           K KP+KGVKLLGFTD+SN+ RHYYM DV  FI EPGN KA++ VSA+A+AMKE+NKVAIL
Sbjct: 423 KFKPEKGVKLLGFTDASNVMRHYYMHDVNIFIAEPGNTKAMLTVSALARAMKEMNKVAIL 482

Query: 362 RCVWKQGQGSVVIGILSPNVSCMDNIPDSFYFNILPFAEDV 484
           RCVW+QGQGSVVIGIL+PNVS  D+IPDSFYFN+LP+AEDV
Sbjct: 483 RCVWRQGQGSVVIGILTPNVSDKDDIPDSFYFNVLPYAEDV 523


>ref|XP_003524779.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU80-like [Glycine
           max]
          Length = 687

 Score =  270 bits (689), Expect = 1e-70
 Identities = 119/161 (73%), Positives = 149/161 (92%)
 Frame = +2

Query: 2   KKYSDKAPSSDKYATHEVKVDFEYKSKEDPDKVVPPEQRIKGYRYGPQVIPISSAEWDSV 181
           KKYSDKAP +DK+A HEVK+D+E+KS +DPDKVVPP+QRIKGY YGPQ++PISSAEW++V
Sbjct: 248 KKYSDKAPPNDKFAKHEVKIDYEHKSSKDPDKVVPPDQRIKGYPYGPQIVPISSAEWEAV 307

Query: 182 KLKPDKGVKLLGFTDSSNIKRHYYMKDVYTFIPEPGNRKAIVAVSAIAQAMKELNKVAIL 361
           K KP+KGVKL+GFTDSSN+ RH+YMKDVY F+PEPGN +A++AVSA+A+AMKE+NKVAI+
Sbjct: 308 KFKPEKGVKLMGFTDSSNVFRHHYMKDVYVFLPEPGNTRAMIAVSAVARAMKEMNKVAIV 367

Query: 362 RCVWKQGQGSVVIGILSPNVSCMDNIPDSFYFNILPFAEDV 484
           RCVW+QGQ +VVIG+L+PN+S  +NIPDSFY N+LPFAEDV
Sbjct: 368 RCVWRQGQANVVIGVLTPNLSDKENIPDSFYLNVLPFAEDV 408


Top