BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016368
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315214.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    62   4e-08
ref|XP_002309072.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_004161919.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    60   1e-07
ref|XP_004147682.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    60   1e-07

>ref|XP_002315214.1| predicted protein [Populus trichocarpa] gi|222864254|gb|EEF01385.1|
           predicted protein [Populus trichocarpa]
          Length = 388

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/74 (44%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
 Frame = +1

Query: 7   SYWCYRCRRVVRAPSTDSVLCSDCGGGFVEEVETPLSADEAPRRRRRHENLAPDS----- 171
           SYWCYRC R V+    DSV C +C  GF+EE+E P    +    R RH  L+P +     
Sbjct: 8   SYWCYRCNRFVQVWRQDSVTCPECESGFIEEIENPPHMIQTEASRERHRRLSPAAGTMFM 67

Query: 172 ISNVDVRLRRNRRG 213
           I N     RRNRRG
Sbjct: 68  IGNRSNPHRRNRRG 81


>ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 361

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/76 (44%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
 Frame = +1

Query: 7   SYWCYRCRRVVRAPSTDSVLCSDCGGGFVEEVETPLSADEAPRRRRRHENLA-------P 165
           SYWCY C R VR  S D+++C DC GGF+EE+E      E PRR  R    A       P
Sbjct: 2   SYWCYSCNRFVRVWSHDAIVCPDCDGGFLEEIE------EQPRRPHRFPAAAMYMIENRP 55

Query: 166 DSISNVDVRLRRNRRG 213
           +S  N    +RR RRG
Sbjct: 56  NSAQNSHSAVRRIRRG 71


>ref|XP_002309072.1| predicted protein [Populus trichocarpa] gi|222855048|gb|EEE92595.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 21/33 (63%), Positives = 28/33 (84%)
 Frame = +1

Query: 4   TSYWCYRCRRVVRAPSTDSVLCSDCGGGFVEEV 102
           +S+WCYRC R +R P+ DS+LC DCGGGF+EE+
Sbjct: 7   SSFWCYRCNRSIRLPTQDSILCPDCGGGFIEEI 39


>ref|XP_004161919.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 380

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 8/77 (10%)
 Frame = +1

Query: 4   TSYWCYRCRRVVRAPSTDSVLCSDCGGGFVEEVETP---LSADEAPRRRRRHENL----- 159
           +SYWC+RC   VR  + DSV+C DC  GFVE++E P   ++ + APRRR     +     
Sbjct: 5   SSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAAAMYMIGN 64

Query: 160 APDSISNVDVRLRRNRR 210
             +S  N+   LRR+RR
Sbjct: 65  RSNSGQNLGSGLRRSRR 81


>ref|XP_004147682.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 383

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 8/77 (10%)
 Frame = +1

Query: 4   TSYWCYRCRRVVRAPSTDSVLCSDCGGGFVEEVETP---LSADEAPRRRRRHENL----- 159
           +SYWC+RC   VR  + DSV+C DC  GFVE++E P   ++ + APRRR     +     
Sbjct: 8   SSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAAAMYMIGN 67

Query: 160 APDSISNVDVRLRRNRR 210
             +S  N+   LRR+RR
Sbjct: 68  RSNSGQNLGSGLRRSRR 84