BLASTX nr result

ID: Dioscorea21_contig00016352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016352
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003564760.1| PREDICTED: PHD finger protein At1g33420-like...    64   1e-08
ref|XP_002325292.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
gb|EAY76692.1| hypothetical protein OsI_04645 [Oryza sativa Indi...    63   2e-08
ref|NP_001044975.1| Os01g0877500 [Oryza sativa Japonica Group] g...    63   2e-08
ref|XP_002518819.1| DNA binding protein, putative [Ricinus commu...    63   3e-08

>ref|XP_003564760.1| PREDICTED: PHD finger protein At1g33420-like [Brachypodium
           distachyon]
          Length = 717

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/83 (37%), Positives = 48/83 (57%)
 Frame = -3

Query: 257 SKVNIDQVETTLIKILKAAGRSRWVPAHALRGVACRRAKSPEMINNCLQTMEGKILSDGS 78
           +K +ID+ E  ++KIL+     RWV   ALRG A +   S E+++  L+ + GK++ DG 
Sbjct: 358 TKEDIDRSEAAMLKILRTVQPGRWVSWRALRGAASKAVNSQELLDYSLRGLPGKLIDDGH 417

Query: 77  TITARYNADARTMEYSLEAAQSQ 9
            I  R NA+   +EY LE   +Q
Sbjct: 418 FIAVRCNAETSAIEYRLETYSNQ 440


>ref|XP_002325292.1| predicted protein [Populus trichocarpa] gi|222862167|gb|EEE99673.1|
           predicted protein [Populus trichocarpa]
          Length = 679

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/78 (38%), Positives = 48/78 (61%)
 Frame = -3

Query: 257 SKVNIDQVETTLIKILKAAGRSRWVPAHALRGVACRRAKSPEMINNCLQTMEGKILSDGS 78
           SK +I++VE  + ++L+A   S WV   ALRG  C+ A  PE++++CL+ + GK  +DG 
Sbjct: 366 SKSDIERVEEAMFRVLRAVSGSNWVSWRALRGAVCKVA-PPELLDHCLKEIGGKFAADGM 424

Query: 77  TITARYNADARTMEYSLE 24
            + +R N  +   EY LE
Sbjct: 425 IVRSRCNPSSGAFEYRLE 442


>gb|EAY76692.1| hypothetical protein OsI_04645 [Oryza sativa Indica Group]
          Length = 716

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/83 (36%), Positives = 49/83 (59%)
 Frame = -3

Query: 257 SKVNIDQVETTLIKILKAAGRSRWVPAHALRGVACRRAKSPEMINNCLQTMEGKILSDGS 78
           +K +ID+ ET ++K+L+     +WV   ALRG A +   S E+++  L+ + GK++ DG 
Sbjct: 359 TKEDIDRAETAMLKVLRVVQPGQWVSWRALRGAASKAVDSQELLDYSLRGLGGKLMDDGH 418

Query: 77  TITARYNADARTMEYSLEAAQSQ 9
            I  R NA+   +EY LE   +Q
Sbjct: 419 FIAVRCNAETSAIEYRLEDNSNQ 441


>ref|NP_001044975.1| Os01g0877500 [Oryza sativa Japonica Group]
           gi|22202666|dbj|BAC07324.1| putative male sterility 1
           protein [Oryza sativa Japonica Group]
           gi|113534506|dbj|BAF06889.1| Os01g0877500 [Oryza sativa
           Japonica Group] gi|125572842|gb|EAZ14357.1| hypothetical
           protein OsJ_04277 [Oryza sativa Japonica Group]
           gi|215704870|dbj|BAG94898.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 716

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/83 (36%), Positives = 49/83 (59%)
 Frame = -3

Query: 257 SKVNIDQVETTLIKILKAAGRSRWVPAHALRGVACRRAKSPEMINNCLQTMEGKILSDGS 78
           +K +ID+ ET ++K+L+     +WV   ALRG A +   S E+++  L+ + GK++ DG 
Sbjct: 359 TKEDIDRAETAMLKVLRVVQPGQWVSWRALRGAASKAVDSQELLDYSLRGLGGKLMDDGH 418

Query: 77  TITARYNADARTMEYSLEAAQSQ 9
            I  R NA+   +EY LE   +Q
Sbjct: 419 FIAVRCNAETSAIEYRLEDNSNQ 441


>ref|XP_002518819.1| DNA binding protein, putative [Ricinus communis]
           gi|223542200|gb|EEF43744.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 677

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/77 (37%), Positives = 47/77 (61%)
 Frame = -3

Query: 254 KVNIDQVETTLIKILKAAGRSRWVPAHALRGVACRRAKSPEMINNCLQTMEGKILSDGST 75
           K ++++VE  ++++LKA   S WV   ALRG  C+ A  P ++++CL+ + GK  +DG  
Sbjct: 353 KNDVERVEEAMLRVLKAVSESTWVSWRALRGAVCKVA-PPNLLDHCLKELGGKAAADGMI 411

Query: 74  ITARYNADARTMEYSLE 24
           +  R N D+   EY LE
Sbjct: 412 VGTRCNPDSGAFEYRLE 428


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