BLASTX nr result

ID: Dioscorea21_contig00016346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016346
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC73971.1| hypothetical protein OsI_08874 [Oryza sativa Indi...   262   5e-68
ref|NP_001048069.1| Os02g0739700 [Oryza sativa Japonica Group] g...   259   3e-67
ref|XP_002452578.1| hypothetical protein SORBIDRAFT_04g028440 [S...   245   8e-63
gb|AFW64530.1| hypothetical protein ZEAMMB73_784560 [Zea mays]        244   2e-62
ref|XP_003573121.1| PREDICTED: LOW QUALITY PROTEIN: E2F transcri...   233   3e-59

>gb|EEC73971.1| hypothetical protein OsI_08874 [Oryza sativa Indica Group]
          Length = 441

 Score =  262 bits (670), Expect = 5e-68
 Identities = 143/244 (58%), Positives = 174/244 (71%), Gaps = 6/244 (2%)
 Frame = -2

Query: 714 RSDNRKEKSLGQLTQNFVKLFLTSNADTVSLDEAARLLLGDCNDATQMKTKVRRLYDIAN 535
           RSD+RKEKSLG LTQNFVKLFLT   DT+SLDEAA+LLLG+ +    M+TKVRRLYDIAN
Sbjct: 195 RSDHRKEKSLGLLTQNFVKLFLTMEVDTISLDEAAKLLLGEGHAENSMRTKVRRLYDIAN 254

Query: 534 VLSSMNLIEKTQQVVTKKPAFRWLGNQGKP--DMGVTIAIPPCTSQI-KKRTFGSEITNL 364
           VLSS+N I+K QQ  ++KPAFRWLG+ GKP  + GVTIA+PP    I  KR FG+E+TN+
Sbjct: 255 VLSSLNFIDKIQQADSRKPAFRWLGSAGKPKAENGVTIAVPPPGKTISNKRAFGTELTNI 314

Query: 363 DFKRSRSVSYVDRKPDKLQMRKEDLKACNLAAQKQL-QTSK-GYVFGPFQPGRVTREGGS 190
           D  RSR  S + +K    Q   E LK C L+ QKQL Q SK G+V+GPF P    ++   
Sbjct: 315 DINRSRLDSTIPKKAKLTQSGGEILKNCKLSVQKQLGQGSKGGFVYGPFHPAGARKQELD 374

Query: 189 EADMGRS-KVQDWESLASSFRPQYHNQALSDLFAHYLEAWKSWFAEVTQGSSSSLQQPYK 13
             + G +  VQ+WESLA+SFRPQY NQAL DLFAHY+EAWKSW++E  QGSS   Q    
Sbjct: 375 NGNKGHTDNVQNWESLAASFRPQYQNQALGDLFAHYVEAWKSWYSEFAQGSSMMQQHFGM 434

Query: 12  SIIN 1
            +IN
Sbjct: 435 PVIN 438


>ref|NP_001048069.1| Os02g0739700 [Oryza sativa Japonica Group]
           gi|46390563|dbj|BAD16049.1| transcription factor-like
           [Oryza sativa Japonica Group]
           gi|113537600|dbj|BAF09983.1| Os02g0739700 [Oryza sativa
           Japonica Group] gi|222623645|gb|EEE57777.1| hypothetical
           protein OsJ_08321 [Oryza sativa Japonica Group]
          Length = 441

 Score =  259 bits (663), Expect = 3e-67
 Identities = 142/244 (58%), Positives = 173/244 (70%), Gaps = 6/244 (2%)
 Frame = -2

Query: 714 RSDNRKEKSLGQLTQNFVKLFLTSNADTVSLDEAARLLLGDCNDATQMKTKVRRLYDIAN 535
           RSD+RKEKSLG LTQNFVKLFLT   DT+SLDEAA+LLLG+ +    M+TKVRRLYDIAN
Sbjct: 195 RSDHRKEKSLGLLTQNFVKLFLTMEVDTISLDEAAKLLLGEGHAENSMRTKVRRLYDIAN 254

Query: 534 VLSSMNLIEKTQQVVTKKPAFRWLGNQGKP--DMGVTIAIPPCTSQI-KKRTFGSEITNL 364
           VLSS+N I+K QQ  ++KPAFRWLG+ GKP  + GVTIA+PP    I  KR FG+E+TN+
Sbjct: 255 VLSSLNFIDKIQQADSRKPAFRWLGSAGKPKAENGVTIAVPPPGKTISNKRAFGTELTNI 314

Query: 363 DFKRSRSVSYVDRKPDKLQMRKEDLKACNLAAQKQL-QTSK-GYVFGPFQPGRVTREGGS 190
           D  RSR  S + +K        E LK C L+ QKQL Q SK G+V+GPF P    ++   
Sbjct: 315 DINRSRLDSTIPKKAKLTLSGGEILKNCKLSVQKQLGQGSKGGFVYGPFHPAGARKQELD 374

Query: 189 EADMGRS-KVQDWESLASSFRPQYHNQALSDLFAHYLEAWKSWFAEVTQGSSSSLQQPYK 13
             + G +  VQ+WESLA+SFRPQY NQAL DLFAHY+EAWKSW++E  QGSS   Q    
Sbjct: 375 NGNKGHTDNVQNWESLAASFRPQYQNQALGDLFAHYVEAWKSWYSEFAQGSSMMQQHFGM 434

Query: 12  SIIN 1
            +IN
Sbjct: 435 PVIN 438


>ref|XP_002452578.1| hypothetical protein SORBIDRAFT_04g028440 [Sorghum bicolor]
           gi|241932409|gb|EES05554.1| hypothetical protein
           SORBIDRAFT_04g028440 [Sorghum bicolor]
          Length = 387

 Score =  245 bits (625), Expect = 8e-63
 Identities = 134/244 (54%), Positives = 170/244 (69%), Gaps = 8/244 (3%)
 Frame = -2

Query: 708 DNRKEKSLGQLTQNFVKLFLTSNADTVSLDEAARLLLGDCNDATQMKTKVRRLYDIANVL 529
           D+RKEKSLG LTQNFVKLFLT   DT+SLDEAA+LLLG+ ++ T M+TKVRRLYDIANVL
Sbjct: 143 DHRKEKSLGLLTQNFVKLFLTMEVDTISLDEAAKLLLGEGHEETNMRTKVRRLYDIANVL 202

Query: 528 SSMNLIEKTQQVVTKKPAFRWLGNQGKP--DMGVTIAI-PPCTSQIKKRTFGSEITNLDF 358
           SS+NLIEK  Q  T+KPAFRWLG    P  + GVT+A+ PP  +   KR FG+E+TN+D 
Sbjct: 203 SSLNLIEKIHQGDTRKPAFRWLGRATTPNTENGVTVAVPPPGKTTSNKRAFGTELTNIDI 262

Query: 357 KRSRSVSYVDRKPDKLQMRKEDLKACNLAAQKQLQTSK--GYVFGPFQPGRVTR---EGG 193
            RS   S V +K    Q   + L  C LA + QL   K  G+V+G F P    +   +GG
Sbjct: 263 HRSNLDSKVQKKAKLAQSGSDVLTNCKLALRSQLGQGKQSGFVYGHFHPAGARKHELDGG 322

Query: 192 SEADMGRSKVQDWESLASSFRPQYHNQALSDLFAHYLEAWKSWFAEVTQGSSSSLQQPYK 13
           ++    R + QDWESL++SFRPQY NQALSDLFAHY+EAWK+W++E  QG S+ +QQ + 
Sbjct: 323 NKPGQ-RERAQDWESLSASFRPQYQNQALSDLFAHYVEAWKTWYSEFAQG-SNIMQQHFG 380

Query: 12  SIIN 1
             +N
Sbjct: 381 HSVN 384


>gb|AFW64530.1| hypothetical protein ZEAMMB73_784560 [Zea mays]
          Length = 444

 Score =  244 bits (622), Expect = 2e-62
 Identities = 132/244 (54%), Positives = 168/244 (68%), Gaps = 6/244 (2%)
 Frame = -2

Query: 714 RSDNRKEKSLGQLTQNFVKLFLTSNADTVSLDEAARLLLGDCNDATQMKTKVRRLYDIAN 535
           RSD+RKEKSLG LTQNFVKLFLT   DT+SLDEAA+LLLG+ ++ T M+TKVRRLYDIAN
Sbjct: 199 RSDHRKEKSLGLLTQNFVKLFLTMEVDTISLDEAAKLLLGEGHEETNMRTKVRRLYDIAN 258

Query: 534 VLSSMNLIEKTQQVVTKKPAFRWLGNQG-KPDMGVTIAIPPCTS-QIKKRTFGSEITNLD 361
           VLSS+NLIEK  Q  ++KPAFRWLG      + GVT+A+PP      KKR FG+E+TN+D
Sbjct: 259 VLSSLNLIEKIHQGDSRKPAFRWLGRATLNTENGVTVAVPPPGKIASKKRAFGTELTNID 318

Query: 360 FKRSRSVSYVDRKPDKLQMRKEDLKACNLAAQKQLQTSK--GYVFGPFQPGRVTREG--G 193
             RS   S   +K   +Q   + L  C LA + +L   K  G+V+GPF P    + G  G
Sbjct: 319 MHRSNLDSKNKKKAKLVQSSGDVLTNCKLAVRSRLGQGKQSGFVYGPFHPSGARKHGLDG 378

Query: 192 SEADMGRSKVQDWESLASSFRPQYHNQALSDLFAHYLEAWKSWFAEVTQGSSSSLQQPYK 13
                 R + +DWESL++SFRPQY NQALSDLF HY++AWK+W++E  QG SS +QQ + 
Sbjct: 379 GNKPGQRERAEDWESLSASFRPQYQNQALSDLFVHYVDAWKTWYSEFAQG-SSIMQQHFG 437

Query: 12  SIIN 1
             +N
Sbjct: 438 HPVN 441


>ref|XP_003573121.1| PREDICTED: LOW QUALITY PROTEIN: E2F transcription factor-like
           E2FE-like [Brachypodium distachyon]
          Length = 449

 Score =  233 bits (594), Expect = 3e-59
 Identities = 131/244 (53%), Positives = 160/244 (65%), Gaps = 7/244 (2%)
 Frame = -2

Query: 714 RSDNRKEKSLGQLTQNFVKLFLTSNADTVSLDEAARLLLGDCNDATQMKTKVRRLYDIAN 535
           RSD+RKEKSLG LTQNFVKLFLT   DT++LDEA++LLLG+ ++ + MK KVRRLYDIAN
Sbjct: 206 RSDHRKEKSLGLLTQNFVKLFLTMEVDTITLDEASKLLLGEGHEESNMKAKVRRLYDIAN 265

Query: 534 VLSSMNLIEKTQQVVTKKPAFRWLGNQG--KPDMGVTIAIPPCTSQI-KKRTFGSEITNL 364
           VLSS+N IEKT Q  T+KPAFRWLG  G  KP+ GVT+A+ P    +  KR FG+E+TN+
Sbjct: 266 VLSSLNFIEKT-QADTRKPAFRWLGTAGKAKPENGVTVAVDPQRKTMSNKRAFGTELTNI 324

Query: 363 DFKRSRSVSYVDRKPDKLQMRKEDLKACNLAAQKQLQTSK--GYVFGPFQP--GRVTREG 196
              RS+  S V +K    Q   + LK   +  Q Q+   K   + +GPF P   R     
Sbjct: 325 GINRSKVDSTVQKKAKLAQSGGDILKNDKIDVQSQVGPVKTSDFAYGPFHPTSARKQEPN 384

Query: 195 GSEADMGRSKVQDWESLASSFRPQYHNQALSDLFAHYLEAWKSWFAEVTQGSSSSLQQPY 16
           G      R   QDWESLA SFRPQY NQAL DLF+HY+EAWKSW +E   GS    QQ  
Sbjct: 385 GWHGAGQRESTQDWESLADSFRPQYQNQALGDLFSHYVEAWKSWHSEFAXGSRIMQQQLG 444

Query: 15  KSII 4
           KS+I
Sbjct: 445 KSVI 448


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