BLASTX nr result

ID: Dioscorea21_contig00016334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016334
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD05286.1| putative SKP1 [Oryza sativa Japonica Group] gi|1...    82   3e-14
ref|NP_001061672.1| Os08g0375700 [Oryza sativa Japonica Group] g...    82   3e-14
gb|EAZ06798.1| hypothetical protein OsI_29042 [Oryza sativa Indi...    82   3e-14
gb|EAZ06800.1| hypothetical protein OsI_29044 [Oryza sativa Indi...    82   3e-14
gb|AAT37114.1| skp1-like protein [Oryza sativa Japonica Group]         82   3e-14

>dbj|BAD05286.1| putative SKP1 [Oryza sativa Japonica Group]
           gi|125603222|gb|EAZ42547.1| hypothetical protein
           OsJ_27113 [Oryza sativa Japonica Group]
          Length = 169

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 37/55 (67%), Positives = 46/55 (83%)
 Frame = +3

Query: 3   NYLDCKPLLDLTCQAVADVIRDMNVEQVRGFFGITNDFTPDEEAAVREENRWAFD 167
           N+L+ + LLDLTCQ  AD+I+DM+VE+VR  F ITNDFTP+EEA VR+EN WAFD
Sbjct: 114 NFLNAQDLLDLTCQHAADLIKDMSVEEVREVFNITNDFTPEEEAEVRKENAWAFD 168


>ref|NP_001061672.1| Os08g0375700 [Oryza sativa Japonica Group]
           gi|27260972|dbj|BAC45089.1| putative SKP1-like protein
           [Oryza sativa Japonica Group] gi|33243056|gb|AAQ01198.1|
           SKP1 [Oryza sativa Japonica Group]
           gi|40253356|dbj|BAD05288.1| putative SKP1-like protein
           [Oryza sativa Japonica Group]
           gi|113623641|dbj|BAF23586.1| Os08g0375700 [Oryza sativa
           Japonica Group] gi|125603221|gb|EAZ42546.1| hypothetical
           protein OsJ_27112 [Oryza sativa Japonica Group]
          Length = 169

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 37/55 (67%), Positives = 46/55 (83%)
 Frame = +3

Query: 3   NYLDCKPLLDLTCQAVADVIRDMNVEQVRGFFGITNDFTPDEEAAVREENRWAFD 167
           N+L+ + LLDLTCQ  AD+I+DM+VE+VR  F ITNDFTP+EEA VR+EN WAFD
Sbjct: 114 NFLNAQDLLDLTCQHAADLIKDMSVEEVREVFNITNDFTPEEEAEVRKENAWAFD 168


>gb|EAZ06798.1| hypothetical protein OsI_29042 [Oryza sativa Indica Group]
          Length = 169

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 37/55 (67%), Positives = 46/55 (83%)
 Frame = +3

Query: 3   NYLDCKPLLDLTCQAVADVIRDMNVEQVRGFFGITNDFTPDEEAAVREENRWAFD 167
           N+L+ + LLDLTCQ  AD+I+DM+VE+VR  F ITNDFTP+EEA VR+EN WAFD
Sbjct: 114 NFLNAQDLLDLTCQHAADLIKDMSVEEVREVFNITNDFTPEEEAEVRKENAWAFD 168


>gb|EAZ06800.1| hypothetical protein OsI_29044 [Oryza sativa Indica Group]
          Length = 169

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 37/55 (67%), Positives = 46/55 (83%)
 Frame = +3

Query: 3   NYLDCKPLLDLTCQAVADVIRDMNVEQVRGFFGITNDFTPDEEAAVREENRWAFD 167
           N+L+ + LLDLTCQ  AD+I+DM+VE+VR  F ITNDFTP+EEA VR+EN WAFD
Sbjct: 114 NFLNAQDLLDLTCQHAADLIKDMSVEEVREVFNITNDFTPEEEAEVRKENAWAFD 168


>gb|AAT37114.1| skp1-like protein [Oryza sativa Japonica Group]
          Length = 169

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 37/55 (67%), Positives = 46/55 (83%)
 Frame = +3

Query: 3   NYLDCKPLLDLTCQAVADVIRDMNVEQVRGFFGITNDFTPDEEAAVREENRWAFD 167
           N+L+ + LLDLTCQ  AD+I+DM+VE+VR  F ITNDFTP+EEA VR+EN WAFD
Sbjct: 114 NFLNAQDLLDLTCQHAADLIKDMSVEEVREVFNITNDFTPEEEAEVRKENAWAFD 168


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