BLASTX nr result

ID: Dioscorea21_contig00016330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016330
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513690.1| conserved hypothetical protein [Ricinus comm...    56   5e-06

>ref|XP_002513690.1| conserved hypothetical protein [Ricinus communis]
           gi|223547598|gb|EEF49093.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 976

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 41/140 (29%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
 Frame = +3

Query: 3   GLFFASGVAFAALSLSGRKTNRVKPQMESIAVEQEVLLTSDDENKRMDQDENYQSRQLME 182
           G+   +G+ FAALSLS R T + K QME + V+QEV L SDDE  +++++ +       E
Sbjct: 108 GIILVAGLTFAALSLSKRTTLKTKQQMEPLTVQQEVSLVSDDEEDKIEKNTS------AE 161

Query: 183 SDNKINDQNSDIETGSNQD-DVQTVPDVDSIPMPADSNPVSSDLIVHDDEHEISIDVSTI 359
           S   + ++   +E  +N D D+ + P ++      + N +S      D +  +S D    
Sbjct: 162 SSANLKEEYISLEHKTNTDVDLPSSPQIEE---THNENKLSG-----DTDQLLSADNGNY 213

Query: 360 NDSQSTTTSNS-VHENYEHE 416
             S + T  N+ V E+ +++
Sbjct: 214 IISSNDTVDNAPVQEDLQYD 233


Top