BLASTX nr result

ID: Dioscorea21_contig00016311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016311
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301798.1| predicted protein [Populus trichocarpa] gi|2...    83   4e-14
emb|CAN63304.1| hypothetical protein VITISV_002333 [Vitis vinifera]    80   3e-13
ref|XP_002265336.2| PREDICTED: RPM1-interacting protein 4-like [...    79   6e-13
gb|ACJ70052.1| RIN4-like protein [Malus x domestica]                   78   2e-12
gb|ACJ70053.1| RIN4-like protein [Malus x domestica]                   75   8e-12

>ref|XP_002301798.1| predicted protein [Populus trichocarpa] gi|222843524|gb|EEE81071.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 55/151 (36%), Positives = 75/151 (49%), Gaps = 26/151 (17%)
 Frame = +2

Query: 164 QQGHVPKYGDWEGGEQELYTAYFENARKGRNAGRLINPND-----XXXXXXXXXXXXXXX 328
           Q+ HVPK+G+WE  E   YTAYF+ ARKGR  G++INPND                    
Sbjct: 3   QRSHVPKFGNWESEENVPYTAYFDKARKGRTGGKMINPNDPQENPDLVSDYAAPDQAPPF 62

Query: 329 XXXXQPEKA--RNALKEKHVGYPSREEEAREVVGFSDSPARK-------LFDEMPQRGKG 481
                PE+A  + A+++ H    SREE   ++  F++SPAR         ++  PQR  G
Sbjct: 63  RAKAPPEEAAGQGAVRQAHEHRTSREES--DLKQFANSPARNENLNRRASYEPAPQRYGG 120

Query: 482 R------------RMSAGSDRSVEQSPLHPH 538
           R            R S GS+ S+EQSP+H H
Sbjct: 121 RGPSFGEAHKRPARYSIGSENSMEQSPIHNH 151


>emb|CAN63304.1| hypothetical protein VITISV_002333 [Vitis vinifera]
          Length = 599

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 56/159 (35%), Positives = 74/159 (46%), Gaps = 23/159 (14%)
 Frame = +2

Query: 155 QQRQQGHVPKYGDWEGGEQELYTAYFENARKGRNAGRLINPNDXXXXXXXXXXXXXXXXX 334
           Q  Q+ HVPK+G+WE  E   YTAYF+ ARKGR   ++INPND                 
Sbjct: 7   QWMQRSHVPKFGNWESEENVPYTAYFDKARKGRTGTKIINPND---PQENPDMFSDNASE 63

Query: 335 XXQPEKARNALKEKHVGYPSREE-----EAREVVGFSDSPARK-------LFDEMPQRGK 478
              P + R A +E+ +G     E     E  +    +DSPAR          +   QR  
Sbjct: 64  ARSPPRTR-AEQEESIGQQVTHEHRLSKEDGDQKQVTDSPARNDNLGRRPSTESTHQRQG 122

Query: 479 GR-----------RMSAGSDRSVEQSPLHPHHQYQQQGR 562
           GR           R S GS+ S+++SPLHPHHQ +  GR
Sbjct: 123 GRGMNSGETYRKPRTSGGSEHSIDRSPLHPHHQARIAGR 161


>ref|XP_002265336.2| PREDICTED: RPM1-interacting protein 4-like [Vitis vinifera]
          Length = 261

 Score = 79.3 bits (194), Expect = 6e-13
 Identities = 55/156 (35%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
 Frame = +2

Query: 164 QQGHVPKYGDWEGGEQELYTAYFENARKGRNAGRLINPNDXXXXXXXXXXXXXXXXXXXQ 343
           Q+ HVPK+G+WE  E   YTAYF+ ARKGR   ++INPND                    
Sbjct: 3   QRSHVPKFGNWESEENVPYTAYFDKARKGRTGTKIINPND---PQENPDMFSDNASEARS 59

Query: 344 PEKARNALKEKHVGYPSREE-----EAREVVGFSDSPARK-------LFDEMPQRGKGR- 484
           P + R A +E+ +G     E     E  +    +DSPAR          +   QR  GR 
Sbjct: 60  PPRTR-AEQEESIGQQVTHEHRLSKEDGDQKQVTDSPARNDNLGRRPSTESTHQRQGGRG 118

Query: 485 ----------RMSAGSDRSVEQSPLHPHHQYQQQGR 562
                     R S GS+ S+++SPLHPHHQ +  GR
Sbjct: 119 MNSGETYRKPRTSGGSEHSIDRSPLHPHHQARIAGR 154


>gb|ACJ70052.1| RIN4-like protein [Malus x domestica]
          Length = 239

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 53/137 (38%), Positives = 68/137 (49%), Gaps = 14/137 (10%)
 Frame = +2

Query: 164 QQGHVPKYGDWEGGEQELYTAYFENARKGRN--AGRLINPNDXXXXXXXXXXXXXXXXXX 337
           Q+ HVPK+G+WE  E   YTAYF+ ARKGR    G++INPND                  
Sbjct: 3   QRSHVPKFGNWEDQESVPYTAYFDKARKGRTGVGGKMINPNDPEENPDILSDTSASSPPK 62

Query: 338 XQPEKARNALKEKHVGYPSREEEAREVVGFSDSPA--RKLFDEMPQRGKG---------- 481
            +PE      K  H    SRE+     + F++SPA  R   +  P RG+G          
Sbjct: 63  VRPEPG----KPVHERRRSREDND---LRFANSPAQRRSSGEHQPNRGRGVSSGETHRRA 115

Query: 482 RRMSAGSDRSVEQSPLH 532
            R SAGS+ SVE+SPLH
Sbjct: 116 ARPSAGSENSVERSPLH 132


>gb|ACJ70053.1| RIN4-like protein [Malus x domestica]
          Length = 241

 Score = 75.5 bits (184), Expect = 8e-12
 Identities = 52/139 (37%), Positives = 68/139 (48%), Gaps = 16/139 (11%)
 Frame = +2

Query: 164 QQGHVPKYGDWEGGEQELYTAYFENARKGRN--AGRLINPNDXXXXXXXXXXXXXXXXXX 337
           Q+ HVPK+G+WEG E   YTAYF+ ARK R    G++INPND                  
Sbjct: 3   QRSHVPKFGNWEGEESVPYTAYFDKARKDRTGVGGKMINPNDPQENPDILSDISASSPPK 62

Query: 338 XQPEKARNALKEKHVGYPSREEEAREVVGFSDSPARKLFD----EMPQRGKG-------- 481
            +PE       EK V    R  E  + + F++SPA++         P RG+G        
Sbjct: 63  VRPE------PEKPVHEQRRSREDND-LRFANSPAQRRNSGESAHQPSRGRGVSSGETRR 115

Query: 482 --RRMSAGSDRSVEQSPLH 532
              R SAGS+ SVE+SPLH
Sbjct: 116 RPARPSAGSENSVERSPLH 134


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