BLASTX nr result
ID: Dioscorea21_contig00016306
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00016306 (446 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18 emb|CBI28420.3| unnamed protein product [Vitis vinifera] 97 2e-18 emb|CBI29005.3| unnamed protein product [Vitis vinifera] 92 3e-17 ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containi... 92 6e-17 ref|XP_002308572.1| predicted protein [Populus trichocarpa] gi|2... 92 6e-17 >ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Vitis vinifera] Length = 679 Score = 96.7 bits (239), Expect = 2e-18 Identities = 39/49 (79%), Positives = 45/49 (91%) Frame = -2 Query: 445 RIVKNLRVCNDCHNVTKLISRIYDREIVVRDNSRFHHFSNGKCSCMDFW 299 RI+KNLRVCNDCH+VTKL+S+IY REI+VRDN RFHHF NG CSCMD+W Sbjct: 631 RIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 679 >emb|CBI28420.3| unnamed protein product [Vitis vinifera] Length = 631 Score = 96.7 bits (239), Expect = 2e-18 Identities = 39/49 (79%), Positives = 45/49 (91%) Frame = -2 Query: 445 RIVKNLRVCNDCHNVTKLISRIYDREIVVRDNSRFHHFSNGKCSCMDFW 299 RI+KNLRVCNDCH+VTKL+S+IY REI+VRDN RFHHF NG CSCMD+W Sbjct: 583 RIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 631 >emb|CBI29005.3| unnamed protein product [Vitis vinifera] Length = 587 Score = 92.4 bits (228), Expect = 3e-17 Identities = 37/49 (75%), Positives = 45/49 (91%) Frame = -2 Query: 445 RIVKNLRVCNDCHNVTKLISRIYDREIVVRDNSRFHHFSNGKCSCMDFW 299 RIVKNLRVC DCH+VTKLIS++Y REI+VRD +RFHHF +G+CSC+DFW Sbjct: 539 RIVKNLRVCRDCHHVTKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 587 >ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Cucumis sativus] gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Cucumis sativus] Length = 681 Score = 91.7 bits (226), Expect = 6e-17 Identities = 36/49 (73%), Positives = 43/49 (87%) Frame = -2 Query: 445 RIVKNLRVCNDCHNVTKLISRIYDREIVVRDNSRFHHFSNGKCSCMDFW 299 RI+KNLR+CNDCH VTKL+S IY+REI++RD SRFHHF +G CSC DFW Sbjct: 633 RIIKNLRICNDCHAVTKLLSHIYNREIIIRDGSRFHHFKSGSCSCKDFW 681 >ref|XP_002308572.1| predicted protein [Populus trichocarpa] gi|222854548|gb|EEE92095.1| predicted protein [Populus trichocarpa] Length = 433 Score = 91.7 bits (226), Expect = 6e-17 Identities = 37/49 (75%), Positives = 44/49 (89%) Frame = -2 Query: 445 RIVKNLRVCNDCHNVTKLISRIYDREIVVRDNSRFHHFSNGKCSCMDFW 299 RIVKNLRVC DCH VTK+ISR+++REI+VRD SRFHHF GKCSC+D+W Sbjct: 385 RIVKNLRVCWDCHEVTKMISRVFEREIIVRDGSRFHHFKEGKCSCLDYW 433