BLASTX nr result

ID: Dioscorea21_contig00016286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016286
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001048189.1| Os02g0760400 [Oryza sativa Japonica Group] g...    59   3e-07
gb|EEC74041.1| hypothetical protein OsI_09020 [Oryza sativa Indi...    59   3e-07
ref|XP_002310494.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07

>ref|NP_001048189.1| Os02g0760400 [Oryza sativa Japonica Group]
           gi|47497366|dbj|BAD19405.1| unknown protein [Oryza
           sativa Japonica Group] gi|113537720|dbj|BAF10103.1|
           Os02g0760400 [Oryza sativa Japonica Group]
           gi|215697251|dbj|BAG91245.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222623712|gb|EEE57844.1| hypothetical protein
           OsJ_08467 [Oryza sativa Japonica Group]
          Length = 289

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/75 (41%), Positives = 47/75 (62%)
 Frame = -2

Query: 313 LVIRLPDHRLISLVARSVMLVIVMVLLPWLRFMAGGNVYSDGGGRGEDSALLTMVVRDLS 134
           +VIRLPD R++ ++ARSV+L + ++ L WLR         D      D+  + +++RDL 
Sbjct: 6   VVIRLPDPRVLRVIARSVLLAVALLSLAWLR---------DAEAPAGDALQVGLLLRDLR 56

Query: 133 RQGLLKPGDKAVFSG 89
           R+GLL PG +AVF G
Sbjct: 57  REGLLAPGARAVFLG 71


>gb|EEC74041.1| hypothetical protein OsI_09020 [Oryza sativa Indica Group]
          Length = 289

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/75 (41%), Positives = 47/75 (62%)
 Frame = -2

Query: 313 LVIRLPDHRLISLVARSVMLVIVMVLLPWLRFMAGGNVYSDGGGRGEDSALLTMVVRDLS 134
           +VIRLPD R++ ++ARSV+L + ++ L WLR         D      D+  + +++RDL 
Sbjct: 6   VVIRLPDPRVLRVIARSVLLAVALLSLAWLR---------DAEAPAGDALQVGLLLRDLR 56

Query: 133 RQGLLKPGDKAVFSG 89
           R+GLL PG +AVF G
Sbjct: 57  REGLLAPGARAVFLG 71


>ref|XP_002310494.1| predicted protein [Populus trichocarpa] gi|222853397|gb|EEE90944.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
 Frame = -2

Query: 313 LVIRLPDHRLISLVARSVMLVIVMVLLPW----LRFMAGGNVYSDGGGRGEDSALLTMVV 146
           LV++LPD R++ +V+RS  L ++++ LP+    LR +   + Y D G    D     +++
Sbjct: 5   LVLKLPDSRVMRVVSRSFFLAMLVLTLPFVVSILRELDSSSYYDDPGSASFDLESFDLLL 64

Query: 145 RDLSRQGLLKPGDKA--VFSG-GPVVWLFPLLKGSRIDLVAE 29
           +DL+++GL+K GDKA  V SG G VV     L  + ID V+E
Sbjct: 65  QDLAKEGLIKKGDKALIVCSGVGAVVDTSRFLNDNDIDFVSE 106


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