BLASTX nr result
ID: Dioscorea21_contig00016286
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00016286 (359 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001048189.1| Os02g0760400 [Oryza sativa Japonica Group] g... 59 3e-07 gb|EEC74041.1| hypothetical protein OsI_09020 [Oryza sativa Indi... 59 3e-07 ref|XP_002310494.1| predicted protein [Populus trichocarpa] gi|2... 59 4e-07 >ref|NP_001048189.1| Os02g0760400 [Oryza sativa Japonica Group] gi|47497366|dbj|BAD19405.1| unknown protein [Oryza sativa Japonica Group] gi|113537720|dbj|BAF10103.1| Os02g0760400 [Oryza sativa Japonica Group] gi|215697251|dbj|BAG91245.1| unnamed protein product [Oryza sativa Japonica Group] gi|222623712|gb|EEE57844.1| hypothetical protein OsJ_08467 [Oryza sativa Japonica Group] Length = 289 Score = 59.3 bits (142), Expect = 3e-07 Identities = 31/75 (41%), Positives = 47/75 (62%) Frame = -2 Query: 313 LVIRLPDHRLISLVARSVMLVIVMVLLPWLRFMAGGNVYSDGGGRGEDSALLTMVVRDLS 134 +VIRLPD R++ ++ARSV+L + ++ L WLR D D+ + +++RDL Sbjct: 6 VVIRLPDPRVLRVIARSVLLAVALLSLAWLR---------DAEAPAGDALQVGLLLRDLR 56 Query: 133 RQGLLKPGDKAVFSG 89 R+GLL PG +AVF G Sbjct: 57 REGLLAPGARAVFLG 71 >gb|EEC74041.1| hypothetical protein OsI_09020 [Oryza sativa Indica Group] Length = 289 Score = 59.3 bits (142), Expect = 3e-07 Identities = 31/75 (41%), Positives = 47/75 (62%) Frame = -2 Query: 313 LVIRLPDHRLISLVARSVMLVIVMVLLPWLRFMAGGNVYSDGGGRGEDSALLTMVVRDLS 134 +VIRLPD R++ ++ARSV+L + ++ L WLR D D+ + +++RDL Sbjct: 6 VVIRLPDPRVLRVIARSVLLAVALLSLAWLR---------DAEAPAGDALQVGLLLRDLR 56 Query: 133 RQGLLKPGDKAVFSG 89 R+GLL PG +AVF G Sbjct: 57 REGLLAPGARAVFLG 71 >ref|XP_002310494.1| predicted protein [Populus trichocarpa] gi|222853397|gb|EEE90944.1| predicted protein [Populus trichocarpa] Length = 379 Score = 58.9 bits (141), Expect = 4e-07 Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 7/102 (6%) Frame = -2 Query: 313 LVIRLPDHRLISLVARSVMLVIVMVLLPW----LRFMAGGNVYSDGGGRGEDSALLTMVV 146 LV++LPD R++ +V+RS L ++++ LP+ LR + + Y D G D +++ Sbjct: 5 LVLKLPDSRVMRVVSRSFFLAMLVLTLPFVVSILRELDSSSYYDDPGSASFDLESFDLLL 64 Query: 145 RDLSRQGLLKPGDKA--VFSG-GPVVWLFPLLKGSRIDLVAE 29 +DL+++GL+K GDKA V SG G VV L + ID V+E Sbjct: 65 QDLAKEGLIKKGDKALIVCSGVGAVVDTSRFLNDNDIDFVSE 106