BLASTX nr result

ID: Dioscorea21_contig00016255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016255
         (1288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269671.1| PREDICTED: SWI/SNF-related matrix-associated...   701   0.0  
ref|XP_002519341.1| Chromatin remodelling complex ATPase chain i...   683   0.0  
ref|XP_003550580.1| PREDICTED: SWI/SNF-related matrix-associated...   671   0.0  
ref|XP_003541328.1| PREDICTED: SWI/SNF-related matrix-associated...   669   0.0  
ref|XP_002315473.1| chromatin remodeling complex subunit [Populu...   660   0.0  

>ref|XP_002269671.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A-like protein 1 [Vitis
            vinifera] gi|297736823|emb|CBI26024.3| unnamed protein
            product [Vitis vinifera]
          Length = 677

 Score =  701 bits (1809), Expect = 0.0
 Identities = 350/429 (81%), Positives = 381/429 (88%)
 Frame = +2

Query: 2    MGLGKTIQAIAFTACIRDSWPVLILTPSSLRLHWASMVQQWLNIPAADILVVLSQYGGSN 181
            MGLGKT+QAIA T C+RDSWPVL+LTPSSLRLHWASM+QQWLNIP++DILVVLSQ+ GSN
Sbjct: 209  MGLGKTLQAIAVTTCVRDSWPVLVLTPSSLRLHWASMIQQWLNIPSSDILVVLSQWSGSN 268

Query: 182  KAGFYTVYLNKTGTTNLDGVFNILSYDAVPKLQNILLSSEFKIVIADESHFLKNAQAKRT 361
            + GF  V  N  GT +LDGVFNI+SYD V KLQ IL  SEFK+VIADESHFLKNAQAKRT
Sbjct: 269  RGGFRIVPSNTKGTIHLDGVFNIISYDVVLKLQKILAESEFKVVIADESHFLKNAQAKRT 328

Query: 362  SASVPILQRARYAILLSGTPALSRPIELFKQLAALYPDVYKNVHEYGNRYCKGGVFGLYQ 541
            SAS+P+LQ+A+Y ILLSGTPALSRPIELFKQL ALYPDVY+NVHEYGNRYCKGGVFG+YQ
Sbjct: 329  SASLPVLQKAQYTILLSGTPALSRPIELFKQLEALYPDVYRNVHEYGNRYCKGGVFGMYQ 388

Query: 542  GASNHEELHNLMKATVMIRRLKKDVLSELPVKRRQQVFLDLDEKDIKQVRFLLRELEVIK 721
            GASNHEELHNLMKATV+IRRLKKDVLSELPVKRRQQVFLDLDEKD+KQ+  L RELEV+K
Sbjct: 389  GASNHEELHNLMKATVLIRRLKKDVLSELPVKRRQQVFLDLDEKDMKQINALFRELEVVK 448

Query: 722  STIQASQSSEEVESLKISQRTLINKIYNDSAQAKIPAVHDYLGTVIEAGCKFLIFAHHQP 901
            S I+AS+S EE ESLK S++ LINKIY DSAQAKIPAV DYLGTV+EAGCKFLIFAHHQP
Sbjct: 449  SKIKASKSKEEAESLKFSEKNLINKIYTDSAQAKIPAVLDYLGTVVEAGCKFLIFAHHQP 508

Query: 902  MIDSIHQFLIKKKVACIRIDGSTPSSSRQALVTDFQEKDSIRAAVLSIKXXXXXXXXXXX 1081
            MIDSI QFL+KKKV CIRIDGSTPSSSRQA VTDFQEKD+I+AAVLSIK           
Sbjct: 509  MIDSIFQFLVKKKVGCIRIDGSTPSSSRQAFVTDFQEKDTIKAAVLSIKAGGVGLTLTAA 568

Query: 1082 XXXIFAELSWTPGDIIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVVQSKLENLGQF 1261
               IFAELSWTPGD+IQAEDR HRIGQVSSVNI+YLLANDTVDDIIWDVVQSKLENLGQ 
Sbjct: 569  STVIFAELSWTPGDLIQAEDRVHRIGQVSSVNIHYLLANDTVDDIIWDVVQSKLENLGQM 628

Query: 1262 LDGEENTLE 1288
            LDG ENTLE
Sbjct: 629  LDGHENTLE 637


>ref|XP_002519341.1| Chromatin remodelling complex ATPase chain isw-1, putative [Ricinus
            communis] gi|223541656|gb|EEF43205.1| Chromatin
            remodelling complex ATPase chain isw-1, putative [Ricinus
            communis]
          Length = 674

 Score =  683 bits (1763), Expect = 0.0
 Identities = 334/429 (77%), Positives = 381/429 (88%)
 Frame = +2

Query: 2    MGLGKTIQAIAFTACIRDSWPVLILTPSSLRLHWASMVQQWLNIPAADILVVLSQYGGSN 181
            MGLGKT+QAIA TAC+RD WPVLILTPSSLRLHWASM+QQWL+IP++DILVVLSQ+ GSN
Sbjct: 206  MGLGKTLQAIAVTACLRDFWPVLILTPSSLRLHWASMIQQWLHIPSSDILVVLSQWSGSN 265

Query: 182  KAGFYTVYLNKTGTTNLDGVFNILSYDAVPKLQNILLSSEFKIVIADESHFLKNAQAKRT 361
            + GF  V  N  G+ +LDG+FNI+SYD VPKLQN+L++SEFK+VIADESHF+KNAQAKRT
Sbjct: 266  RGGFTIVSSNTKGSIHLDGLFNIISYDVVPKLQNVLMASEFKVVIADESHFMKNAQAKRT 325

Query: 362  SASVPILQRARYAILLSGTPALSRPIELFKQLAALYPDVYKNVHEYGNRYCKGGVFGLYQ 541
            +AS+P++++A+YA+LLSGTPALSRPIELFKQL ALYPDVY+NVHEYGNRYC+GG+FG+YQ
Sbjct: 326  TASLPVIKKAQYAVLLSGTPALSRPIELFKQLEALYPDVYRNVHEYGNRYCRGGIFGVYQ 385

Query: 542  GASNHEELHNLMKATVMIRRLKKDVLSELPVKRRQQVFLDLDEKDIKQVRFLLRELEVIK 721
            GASNHEELHNLMKATVMIRRLKKDVL+ELP+KRRQQVFLDL EKD+K++  L RELEV+K
Sbjct: 386  GASNHEELHNLMKATVMIRRLKKDVLAELPLKRRQQVFLDLAEKDMKKINALFRELEVVK 445

Query: 722  STIQASQSSEEVESLKISQRTLINKIYNDSAQAKIPAVHDYLGTVIEAGCKFLIFAHHQP 901
              I+A  S+EEVESLK S++ +INKIY DSA+AKIP V DYL TVIEAGCKFLIFAHHQP
Sbjct: 446  GKIKACSSAEEVESLKFSEKNIINKIYTDSAEAKIPGVLDYLATVIEAGCKFLIFAHHQP 505

Query: 902  MIDSIHQFLIKKKVACIRIDGSTPSSSRQALVTDFQEKDSIRAAVLSIKXXXXXXXXXXX 1081
            MIDSIH+FL+KKKV CIRIDG TP  SRQ+LVTDFQEKD+I+AAVLSIK           
Sbjct: 506  MIDSIHEFLVKKKVGCIRIDGRTPPVSRQSLVTDFQEKDAIKAAVLSIKAGGVGLTLTAA 565

Query: 1082 XXXIFAELSWTPGDIIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVVQSKLENLGQF 1261
               IFAELSWTPGD+IQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVVQSKLENLGQ 
Sbjct: 566  STVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVVQSKLENLGQM 625

Query: 1262 LDGEENTLE 1288
            LDG EN LE
Sbjct: 626  LDGHENALE 634


>ref|XP_003550580.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A-like protein 1-like
            [Glycine max]
          Length = 751

 Score =  671 bits (1730), Expect = 0.0
 Identities = 327/429 (76%), Positives = 379/429 (88%)
 Frame = +2

Query: 2    MGLGKTIQAIAFTACIRDSWPVLILTPSSLRLHWASMVQQWLNIPAADILVVLSQYGGSN 181
            MGLGKT+QAIA  +CI+D WPVLI+ PSSLRL WASM+QQWLNIP++DIL+VLSQ GGSN
Sbjct: 260  MGLGKTLQAIAVASCIQDLWPVLIIAPSSLRLQWASMIQQWLNIPSSDILIVLSQSGGSN 319

Query: 182  KAGFYTVYLNKTGTTNLDGVFNILSYDAVPKLQNILLSSEFKIVIADESHFLKNAQAKRT 361
            + GF  V  +   +  LDG+FNI+SYD VPKLQN+L++ +FK+VIADESHFLKNAQAKRT
Sbjct: 320  RGGFNIVSSSAKSSIRLDGLFNIISYDLVPKLQNMLMTHDFKVVIADESHFLKNAQAKRT 379

Query: 362  SASVPILQRARYAILLSGTPALSRPIELFKQLAALYPDVYKNVHEYGNRYCKGGVFGLYQ 541
            +AS+P++++A+YA+LLSGTPALSRPIELFKQL ALYPDVY+NVHEYGNRYCKGGVFG+YQ
Sbjct: 380  TASLPVIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYRNVHEYGNRYCKGGVFGVYQ 439

Query: 542  GASNHEELHNLMKATVMIRRLKKDVLSELPVKRRQQVFLDLDEKDIKQVRFLLRELEVIK 721
            GASNHEELHNL+KATVMIRRLKKDVLS+LPVKRRQQVFLDL+ KD+KQ+  L +ELE++K
Sbjct: 440  GASNHEELHNLIKATVMIRRLKKDVLSQLPVKRRQQVFLDLENKDMKQINALFQELEMVK 499

Query: 722  STIQASQSSEEVESLKISQRTLINKIYNDSAQAKIPAVHDYLGTVIEAGCKFLIFAHHQP 901
            + I+A++S EE ESLK +Q+ LINKIY DSA+AKIP+V DY+GTVIEAGCKFLIFAHHQP
Sbjct: 500  AKIKAAKSQEEAESLKFAQKNLINKIYTDSAEAKIPSVLDYIGTVIEAGCKFLIFAHHQP 559

Query: 902  MIDSIHQFLIKKKVACIRIDGSTPSSSRQALVTDFQEKDSIRAAVLSIKXXXXXXXXXXX 1081
            MIDSIH+FL+KKKV CIRIDG TP++SRQ LVTDFQEKD+I+AAVLSIK           
Sbjct: 560  MIDSIHEFLLKKKVGCIRIDGGTPAASRQQLVTDFQEKDAIKAAVLSIKAGGVGLTLTAA 619

Query: 1082 XXXIFAELSWTPGDIIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVVQSKLENLGQF 1261
               IFAELSWTPGD+IQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVVQSKLENLGQ 
Sbjct: 620  STVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVVQSKLENLGQM 679

Query: 1262 LDGEENTLE 1288
            LDG EN LE
Sbjct: 680  LDGHENVLE 688


>ref|XP_003541328.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A-like protein 1-like
            [Glycine max]
          Length = 665

 Score =  669 bits (1727), Expect = 0.0
 Identities = 327/429 (76%), Positives = 379/429 (88%)
 Frame = +2

Query: 2    MGLGKTIQAIAFTACIRDSWPVLILTPSSLRLHWASMVQQWLNIPAADILVVLSQYGGSN 181
            MGLGKT+QAIA  +C++DSWPVLI+ PSSLRL WASM+QQWLNIP++DIL+VLSQ GGSN
Sbjct: 197  MGLGKTLQAIAVASCVQDSWPVLIIAPSSLRLQWASMIQQWLNIPSSDILIVLSQNGGSN 256

Query: 182  KAGFYTVYLNKTGTTNLDGVFNILSYDAVPKLQNILLSSEFKIVIADESHFLKNAQAKRT 361
            + GF  V  +   + +LDG+FNI+SYD VPKLQN+L++  FK+VIADESHFLKNAQAKRT
Sbjct: 257  RGGFNIVSSSAKSSIHLDGLFNIISYDLVPKLQNMLMTCNFKVVIADESHFLKNAQAKRT 316

Query: 362  SASVPILQRARYAILLSGTPALSRPIELFKQLAALYPDVYKNVHEYGNRYCKGGVFGLYQ 541
            +AS+P++++A+YA+LLSGTPALSRPIELFKQL ALYPDVY+NVHEYGNRYCKGG FG+YQ
Sbjct: 317  TASLPVIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYRNVHEYGNRYCKGGFFGVYQ 376

Query: 542  GASNHEELHNLMKATVMIRRLKKDVLSELPVKRRQQVFLDLDEKDIKQVRFLLRELEVIK 721
            GASNHEELHNL+KATVMIRRLKKDVLS+LPVKRRQQVFLDL  KD+KQ+  L RELE++K
Sbjct: 377  GASNHEELHNLIKATVMIRRLKKDVLSQLPVKRRQQVFLDLAGKDMKQINALFRELEMVK 436

Query: 722  STIQASQSSEEVESLKISQRTLINKIYNDSAQAKIPAVHDYLGTVIEAGCKFLIFAHHQP 901
            + I+A++S EE ESLK +Q+ LINKIY DSA+AKIP+V DY+GTVIEAGCKFLIFAHHQP
Sbjct: 437  AKIKAAKSQEEAESLKFAQKNLINKIYTDSAEAKIPSVLDYVGTVIEAGCKFLIFAHHQP 496

Query: 902  MIDSIHQFLIKKKVACIRIDGSTPSSSRQALVTDFQEKDSIRAAVLSIKXXXXXXXXXXX 1081
            MIDSIH+FL+KKKV CIRIDGSTP++SRQ LVTDFQEKDSI+AAVLSIK           
Sbjct: 497  MIDSIHEFLLKKKVGCIRIDGSTPAASRQQLVTDFQEKDSIKAAVLSIKAGGVGLTLTAA 556

Query: 1082 XXXIFAELSWTPGDIIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVVQSKLENLGQF 1261
               IF+ELSWTPGD+IQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVVQ+KLENLGQ 
Sbjct: 557  STVIFSELSWTPGDLIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVVQNKLENLGQM 616

Query: 1262 LDGEENTLE 1288
            LDG EN LE
Sbjct: 617  LDGHENALE 625


>ref|XP_002315473.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222864513|gb|EEF01644.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 670

 Score =  660 bits (1703), Expect = 0.0
 Identities = 333/438 (76%), Positives = 378/438 (86%), Gaps = 9/438 (2%)
 Frame = +2

Query: 2    MGLGKTIQAI---------AFTACIRDSWPVLILTPSSLRLHWASMVQQWLNIPAADILV 154
            MGLGKT+QAI         + + C+R+SWPVLIL PSSLRLHWAS + QWL+IP++DILV
Sbjct: 195  MGLGKTLQAIYLLISISILSISTCVRNSWPVLILAPSSLRLHWASTIHQWLDIPSSDILV 254

Query: 155  VLSQYGGSNKAGFYTVYLNKTGTTNLDGVFNILSYDAVPKLQNILLSSEFKIVIADESHF 334
            VLSQ  GSN+AGF  V  +++ T  LDG+FNI+SYDAVPKLQN L++SEFK+VIADESHF
Sbjct: 255  VLSQSSGSNRAGFNIVSSSRS-TIRLDGLFNIISYDAVPKLQNKLMTSEFKVVIADESHF 313

Query: 335  LKNAQAKRTSASVPILQRARYAILLSGTPALSRPIELFKQLAALYPDVYKNVHEYGNRYC 514
            LKNAQAKRT+AS+P++++A+YAILLSGTPALSRPIELFKQL ALYPDVYKNVHEYGNRYC
Sbjct: 314  LKNAQAKRTTASLPVIKKAQYAILLSGTPALSRPIELFKQLEALYPDVYKNVHEYGNRYC 373

Query: 515  KGGVFGLYQGASNHEELHNLMKATVMIRRLKKDVLSELPVKRRQQVFLDLDEKDIKQVRF 694
            KGG+FG+YQGASNHEELHNL+KATVMIRRLKKDVLSELPVKRRQQVFLDL EKD+KQ+  
Sbjct: 374  KGGIFGVYQGASNHEELHNLIKATVMIRRLKKDVLSELPVKRRQQVFLDLPEKDMKQINT 433

Query: 695  LLRELEVIKSTIQASQSSEEVESLKISQRTLINKIYNDSAQAKIPAVHDYLGTVIEAGCK 874
            L RELEV+K  I+A  S EEVESLK +++ LINKIY DSA+AKI  V DYLGTVIEAGCK
Sbjct: 434  LFRELEVVKGKIKACASDEEVESLKFTEKNLINKIYTDSAEAKISGVLDYLGTVIEAGCK 493

Query: 875  FLIFAHHQPMIDSIHQFLIKKKVACIRIDGSTPSSSRQALVTDFQEKDSIRAAVLSIKXX 1054
            FLIFAHHQ MIDSIH+FL+KKKV CIRIDG T ++SRQALVTDFQEKD+I+AAVLSI+  
Sbjct: 494  FLIFAHHQSMIDSIHEFLLKKKVGCIRIDGKTAAASRQALVTDFQEKDAIKAAVLSIRAG 553

Query: 1055 XXXXXXXXXXXXIFAELSWTPGDIIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVVQ 1234
                        IFAELSWTPGD+IQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVVQ
Sbjct: 554  GVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVVQ 613

Query: 1235 SKLENLGQFLDGEENTLE 1288
            SKLENLGQ LDG+E TLE
Sbjct: 614  SKLENLGQMLDGQEKTLE 631


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