BLASTX nr result

ID: Dioscorea21_contig00016222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016222
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47926.1| unknown [Medicago truncatula]                           57   2e-06
gb|ACJ84110.1| unknown [Medicago truncatula]                           57   2e-06
ref|XP_004149609.1| PREDICTED: 60S ribosomal protein L6-like [Cu...    56   3e-06
ref|XP_004154716.1| PREDICTED: 60S ribosomal protein L6-like [Cu...    56   4e-06
ref|XP_004150161.1| PREDICTED: 60S ribosomal protein L6-like [Cu...    56   4e-06

>gb|AFK47926.1| unknown [Medicago truncatula]
          Length = 234

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/63 (49%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
 Frame = -2

Query: 314 PAGIRSIDEFSKSKMYHKPAT*AIKVKNGGVLLKHSRRWR*ESCRE-DTQALPADDMKKP 138
           P  IR I +FSKS+MYHK    AIK KNGGV  +H  + + E+  E   +  PADD+KKP
Sbjct: 15  PDLIRGIGKFSKSQMYHKKGIWAIKAKNGGVFPRHDPKPKPETAAEKPPKFYPADDVKKP 74

Query: 137 VAN 129
           + N
Sbjct: 75  LRN 77


>gb|ACJ84110.1| unknown [Medicago truncatula]
          Length = 234

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/63 (49%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
 Frame = -2

Query: 314 PAGIRSIDEFSKSKMYHKPAT*AIKVKNGGVLLKHSRRWR*ESCRE-DTQALPADDMKKP 138
           P  IR I +FSKS+MYHK    AIK KNGGV  +H  + + E+  E   +  PADD+KKP
Sbjct: 15  PDLIRGIGKFSKSQMYHKKGIWAIKAKNGGVFPRHDPKPKPETAAEKPPKFYPADDVKKP 74

Query: 137 VAN 129
           + N
Sbjct: 75  LRN 77


>ref|XP_004149609.1| PREDICTED: 60S ribosomal protein L6-like [Cucumis sativus]
           gi|449533212|ref|XP_004173570.1| PREDICTED: 60S
           ribosomal protein L6-like [Cucumis sativus]
          Length = 231

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
 Frame = -2

Query: 314 PAGIRSIDEFSKSKMYHKPAT*AIKVKNGGVLLKHSRRWR*ES-CREDTQALPADDMKKP 138
           P  IR + ++S+SKMYHK    AIK KNGGV  +H  + + E+   +  +  PADD+KKP
Sbjct: 12  PDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPPKFYPADDVKKP 71

Query: 137 VANCR 123
           + N R
Sbjct: 72  IVNKR 76


>ref|XP_004154716.1| PREDICTED: 60S ribosomal protein L6-like [Cucumis sativus]
          Length = 231

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
 Frame = -2

Query: 314 PAGIRSIDEFSKSKMYHKPAT*AIKVKNGGVLLKHSRRWR*ES-CREDTQALPADDMKKP 138
           P  IR + ++S+SKMYHK    AIK KNGGV  +H  + + +S   +  +  PADD+KKP
Sbjct: 12  PELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKP 71

Query: 137 VANCR 123
           + N R
Sbjct: 72  LVNKR 76


>ref|XP_004150161.1| PREDICTED: 60S ribosomal protein L6-like [Cucumis sativus]
          Length = 231

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
 Frame = -2

Query: 314 PAGIRSIDEFSKSKMYHKPAT*AIKVKNGGVLLKHSRRWR*ES-CREDTQALPADDMKKP 138
           P  IR + ++S+SKMYHK    AIK KNGGV  +H  + + +S   +  +  PADD+KKP
Sbjct: 12  PELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKP 71

Query: 137 VANCR 123
           + N R
Sbjct: 72  LVNKR 76


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