BLASTX nr result

ID: Dioscorea21_contig00016204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016204
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY73868.1| hypothetical protein OsI_01746 [Oryza sativa Indi...   107   1e-21
ref|XP_002455591.1| hypothetical protein SORBIDRAFT_03g013580 [S...   106   2e-21
gb|EEE54489.1| hypothetical protein OsJ_01607 [Oryza sativa Japo...   106   2e-21
tpg|DAA54504.1| TPA: transcription initiation factor IID, subuni...   104   7e-21
ref|NP_001148906.1| LOC100282526 [Zea mays] gi|195623128|gb|ACG3...   103   1e-20

>gb|EAY73868.1| hypothetical protein OsI_01746 [Oryza sativa Indica Group]
          Length = 161

 Score =  107 bits (266), Expect = 1e-21
 Identities = 51/65 (78%), Positives = 55/65 (84%)
 Frame = -3

Query: 197 AGGAGXXXXXXXXXSLKRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEYITDLV 18
           +GG G         +LKRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEY+TDLV
Sbjct: 41  SGGGGGGGADASATTLKRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLV 100

Query: 17  HKAQD 3
           HKAQ+
Sbjct: 101 HKAQN 105


>ref|XP_002455591.1| hypothetical protein SORBIDRAFT_03g013580 [Sorghum bicolor]
           gi|241927566|gb|EES00711.1| hypothetical protein
           SORBIDRAFT_03g013580 [Sorghum bicolor]
          Length = 187

 Score =  106 bits (265), Expect = 2e-21
 Identities = 51/64 (79%), Positives = 54/64 (84%)
 Frame = -3

Query: 194 GGAGXXXXXXXXXSLKRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEYITDLVH 15
           GG G         +LKRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEY+TDLVH
Sbjct: 68  GGGGGGGADASATTLKRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLVH 127

Query: 14  KAQD 3
           KAQ+
Sbjct: 128 KAQN 131


>gb|EEE54489.1| hypothetical protein OsJ_01607 [Oryza sativa Japonica Group]
          Length = 163

 Score =  106 bits (265), Expect = 2e-21
 Identities = 51/64 (79%), Positives = 54/64 (84%)
 Frame = -3

Query: 194 GGAGXXXXXXXXXSLKRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEYITDLVH 15
           GG G         +LKRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEY+TDLVH
Sbjct: 44  GGGGGGGADASATTLKRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLVH 103

Query: 14  KAQD 3
           KAQ+
Sbjct: 104 KAQN 107


>tpg|DAA54504.1| TPA: transcription initiation factor IID, subunit family protein
           [Zea mays]
          Length = 185

 Score =  104 bits (260), Expect = 7e-21
 Identities = 50/65 (76%), Positives = 54/65 (83%)
 Frame = -3

Query: 197 AGGAGXXXXXXXXXSLKRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEYITDLV 18
           + G G         +LKRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEY+TDLV
Sbjct: 65  SAGGGGGGADASATTLKRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLV 124

Query: 17  HKAQD 3
           HKAQ+
Sbjct: 125 HKAQN 129


>ref|NP_001148906.1| LOC100282526 [Zea mays] gi|195623128|gb|ACG33394.1| transcription
           initiation factor IID, 18kD subunit family protein [Zea
           mays]
          Length = 185

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/50 (96%), Positives = 50/50 (100%)
 Frame = -3

Query: 152 LKRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEYITDLVHKAQD 3
           LKRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEY+TDLVHKAQ+
Sbjct: 80  LKRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDLVHKAQN 129