BLASTX nr result

ID: Dioscorea21_contig00016148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016148
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518313.1| PREDICTED: clathrin heavy chain 1-like [Glyc...   165   4e-39
gb|AFN87703.1| clathrin heavy chain 2, partial [Nicotiana tabacum]    164   9e-39
gb|AFN87702.1| clathrin heavy chain 1, partial [Nicotiana tabacum]    164   9e-39
ref|XP_003516582.1| PREDICTED: clathrin heavy chain 1-like [Glyc...   163   1e-38
tpg|DAA59152.1| TPA: putative clathrin heavy chain family protei...   162   2e-38

>ref|XP_003518313.1| PREDICTED: clathrin heavy chain 1-like [Glycine max]
          Length = 1706

 Score =  165 bits (417), Expect = 4e-39
 Identities = 76/80 (95%), Positives = 80/80 (100%)
 Frame = -3

Query: 241  METCSQSGDRELSEELLVYFIEQGKKECFASCLFICYDLIRPDVALELAWMNNMIDFAFP 62
            METCSQSGDRELSE+LLVYFIEQGKKECFASCLF+CYD+IRPDVALELAWMNNMIDFAFP
Sbjct: 1551 METCSQSGDRELSEDLLVYFIEQGKKECFASCLFVCYDIIRPDVALELAWMNNMIDFAFP 1610

Query: 61   YLLQFIREYTGKVDELVKDK 2
            YLLQFIREYTGKVDEL+KDK
Sbjct: 1611 YLLQFIREYTGKVDELIKDK 1630


>gb|AFN87703.1| clathrin heavy chain 2, partial [Nicotiana tabacum]
          Length = 404

 Score =  164 bits (414), Expect = 9e-39
 Identities = 77/81 (95%), Positives = 80/81 (98%)
 Frame = -3

Query: 244 AMETCSQSGDRELSEELLVYFIEQGKKECFASCLFICYDLIRPDVALELAWMNNMIDFAF 65
           AMET SQSGDREL+EELLVYFIEQGKKECFASCLF+CYDLIRPDVALELAWMNNMIDFAF
Sbjct: 250 AMETASQSGDRELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELAWMNNMIDFAF 309

Query: 64  PYLLQFIREYTGKVDELVKDK 2
           PYLLQFIREYTGKVDEL+KDK
Sbjct: 310 PYLLQFIREYTGKVDELIKDK 330


>gb|AFN87702.1| clathrin heavy chain 1, partial [Nicotiana tabacum]
          Length = 404

 Score =  164 bits (414), Expect = 9e-39
 Identities = 77/81 (95%), Positives = 80/81 (98%)
 Frame = -3

Query: 244 AMETCSQSGDRELSEELLVYFIEQGKKECFASCLFICYDLIRPDVALELAWMNNMIDFAF 65
           AMET SQSGDREL+EELLVYFIEQGKKECFASCLF+CYDLIRPDVALELAWMNNMIDFAF
Sbjct: 250 AMETASQSGDRELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELAWMNNMIDFAF 309

Query: 64  PYLLQFIREYTGKVDELVKDK 2
           PYLLQFIREYTGKVDEL+KDK
Sbjct: 310 PYLLQFIREYTGKVDELIKDK 330


>ref|XP_003516582.1| PREDICTED: clathrin heavy chain 1-like [Glycine max]
          Length = 1702

 Score =  163 bits (413), Expect = 1e-38
 Identities = 74/80 (92%), Positives = 80/80 (100%)
 Frame = -3

Query: 241  METCSQSGDRELSEELLVYFIEQGKKECFASCLFICYDLIRPDVALELAWMNNMIDFAFP 62
            METCSQSGDRELSE+LL+YFIEQGKKECFASCLF+CYD+IRPDVALEL+WMNNMIDFAFP
Sbjct: 1551 METCSQSGDRELSEDLLIYFIEQGKKECFASCLFVCYDIIRPDVALELSWMNNMIDFAFP 1610

Query: 61   YLLQFIREYTGKVDELVKDK 2
            YLLQFIREYTGKVDEL+KDK
Sbjct: 1611 YLLQFIREYTGKVDELIKDK 1630


>tpg|DAA59152.1| TPA: putative clathrin heavy chain family protein [Zea mays]
          Length = 394

 Score =  162 bits (411), Expect = 2e-38
 Identities = 76/80 (95%), Positives = 79/80 (98%)
 Frame = -3

Query: 241 METCSQSGDRELSEELLVYFIEQGKKECFASCLFICYDLIRPDVALELAWMNNMIDFAFP 62
           METCSQSGDRELSE+LLVYFIEQGKKECFASCLFICYDLIRPDVALELAWMNNM+DFAFP
Sbjct: 236 METCSQSGDRELSEDLLVYFIEQGKKECFASCLFICYDLIRPDVALELAWMNNMVDFAFP 295

Query: 61  YLLQFIREYTGKVDELVKDK 2
           YLLQFIREYT KVD+LVKDK
Sbjct: 296 YLLQFIREYTSKVDDLVKDK 315


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