BLASTX nr result

ID: Dioscorea21_contig00016128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016128
         (867 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002444480.1| hypothetical protein SORBIDRAFT_07g022600 [S...   111   2e-22
dbj|BAK01521.1| predicted protein [Hordeum vulgare subsp. vulgar...   110   4e-22
ref|XP_002441802.1| hypothetical protein SORBIDRAFT_08g002550 [S...   106   8e-21
tpg|DAA48376.1| TPA: putative RING zinc finger domain superfamil...   105   1e-20
ref|XP_003572278.1| PREDICTED: uncharacterized protein LOC100828...   104   3e-20

>ref|XP_002444480.1| hypothetical protein SORBIDRAFT_07g022600 [Sorghum bicolor]
           gi|241940830|gb|EES13975.1| hypothetical protein
           SORBIDRAFT_07g022600 [Sorghum bicolor]
          Length = 321

 Score =  111 bits (277), Expect = 2e-22
 Identities = 62/155 (40%), Positives = 84/155 (54%), Gaps = 11/155 (7%)
 Frame = -1

Query: 477 APRSAIDAIPTVEISESCLICAVCKDDLPLRSSARRLPCSHFYHSDCIVPWLSLHDSCPL 298
           A  ++I A+PTVE++E   +CA+CKDDLPL S AR+LPC+H YHS CIV WL +H+SCP+
Sbjct: 162 ATAASIAALPTVEVAEPAAVCAICKDDLPLASEARKLPCAHLYHSFCIVTWLQMHNSCPV 221

Query: 297 CR--------SPLEPSAARGLSSSSVRSDDXXXXXXXXXXXXXXXXXXXXXXXXRMARVE 142
           CR        +PLE   A   +  ++R                           ++A+  
Sbjct: 222 CRFRIPDDEAAPLEQDPAPPTTRITIRFTTTTRRRVRVGGDATLAAAPISASPTQLAQAI 281

Query: 141 V--GSTGMENSGETVSSRW-LEDDGDIVISEIREG 46
              G+ G  NSGETVSS W    + D V+SE REG
Sbjct: 282 TGDGAGGPANSGETVSSEWPPHPESDTVMSEAREG 316


>dbj|BAK01521.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326489306|dbj|BAK01636.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 294

 Score =  110 bits (275), Expect = 4e-22
 Identities = 63/151 (41%), Positives = 79/151 (52%), Gaps = 8/151 (5%)
 Frame = -1

Query: 477 APRSAIDAIPTVEISESCLICAVCKDDLPLRSSARRLPCSHFYHSDCIVPWLSLHDSCPL 298
           AP ++I A+PTVE+SE   +CA+CKDDLPL  +ARRLPC H YHS CIV WL +H+SCP+
Sbjct: 138 APAASIAAVPTVEVSEPASVCAICKDDLPLAVAARRLPCGHLYHSVCIVQWLEMHNSCPV 197

Query: 297 CRSPLEPSAAR-----GLSSSSVRSDDXXXXXXXXXXXXXXXXXXXXXXXXRMARVEV-- 139
           CRS L P+  R     GL     +                           ++A      
Sbjct: 198 CRSCLPPTNLREVEPLGLDPPPTQITIRFTTNRRRTRTNSDVVAPVATSPTQLAEAMTGE 257

Query: 138 GSTGMENSGETVSSRW-LEDDGDIVISEIRE 49
           G  G  NS ETVSS W    + D V+SE RE
Sbjct: 258 GGAGPANSAETVSSEWPPPPESDAVMSETRE 288


>ref|XP_002441802.1| hypothetical protein SORBIDRAFT_08g002550 [Sorghum bicolor]
           gi|241942495|gb|EES15640.1| hypothetical protein
           SORBIDRAFT_08g002550 [Sorghum bicolor]
          Length = 208

 Score =  106 bits (264), Expect = 8e-21
 Identities = 46/78 (58%), Positives = 60/78 (76%)
 Frame = -1

Query: 477 APRSAIDAIPTVEISESCLICAVCKDDLPLRSSARRLPCSHFYHSDCIVPWLSLHDSCPL 298
           AP ++I+A+PTVE+SE   +CA+CKDDLPL ++ARRLPC H YHS CIVPWL +H+SCP+
Sbjct: 93  APAASIEALPTVEVSEPGAVCAICKDDLPLAAAARRLPCGHLYHSSCIVPWLEVHNSCPI 152

Query: 297 CRSPLEPSAARGLSSSSV 244
           CR  L PS   G ++  V
Sbjct: 153 CRCRL-PSENTGPAAGEV 169


>tpg|DAA48376.1| TPA: putative RING zinc finger domain superfamily protein [Zea
           mays]
          Length = 295

 Score =  105 bits (263), Expect = 1e-20
 Identities = 60/156 (38%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
 Frame = -1

Query: 477 APRSAIDAIPTVEISESCLICAVCKDDLPLRSSARRLPCSHFYHSDCIVPWLSLHDSCPL 298
           A  ++I A+PTVE++E   +CA+CKDDLPL S AR+LPC+H YHS CIV WL +H+SCP+
Sbjct: 135 ATAASIAALPTVEVAEPTAVCAICKDDLPLASEARKLPCAHLYHSFCIVTWLGMHNSCPV 194

Query: 297 CRSPLEPSAARGLSSSSVR-----------SDDXXXXXXXXXXXXXXXXXXXXXXXXRMA 151
           CR  + P+     ++ S +           S                            A
Sbjct: 195 CRFRIPPADDPDQAAPSQQDPPPTRITIRFSTTTRRRVRIGSDAPLASHISASPTQLAQA 254

Query: 150 RVEVGSTGMENSGETVSSRW-LEDDGDIVISEIREG 46
               G+ G  NSGETVSS W    + D V+SE REG
Sbjct: 255 ITGDGAGGPANSGETVSSEWPPHPESDTVMSEAREG 290


>ref|XP_003572278.1| PREDICTED: uncharacterized protein LOC100828707 [Brachypodium
           distachyon]
          Length = 306

 Score =  104 bits (259), Expect = 3e-20
 Identities = 60/153 (39%), Positives = 76/153 (49%), Gaps = 9/153 (5%)
 Frame = -1

Query: 477 APRSAIDAIPTVEISESCLICAVCKDDLPLRSSARRLPCSHFYHSDCIVPWLSLHDSCPL 298
           A  ++I A+PTVE+SE+  +CA+CKDDLPL ++ARRLPC H YHSDCIV WL + +SCP+
Sbjct: 149 ATAASIAAVPTVEVSETAEVCAICKDDLPLAAAARRLPCGHLYHSDCIVQWLEMRNSCPV 208

Query: 297 CRSPL--------EPSAARGLSSSSVRSDDXXXXXXXXXXXXXXXXXXXXXXXXRMARVE 142
           CRS L        EPS      +                                 A   
Sbjct: 209 CRSCLPSTDLEEVEPSELDPPPTRITIRFTTNRRSRVRGANGAVAPVATSPTQLAQAMTG 268

Query: 141 VGSTGMENSGETVSSRW-LEDDGDIVISEIREG 46
            G  G  NS ETVSS W    + D  +SE R+G
Sbjct: 269 EGGAGPANSQETVSSEWPPPPESDAAMSEARQG 301


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