BLASTX nr result

ID: Dioscorea21_contig00016100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016100
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [V...    66   3e-09
emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]    66   3e-09
ref|XP_002512587.1| conserved hypothetical protein [Ricinus comm...    58   9e-07
ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [C...    57   2e-06
gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]    55   8e-06

>ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
          Length = 752

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 5/102 (4%)
 Frame = -3

Query: 293 EFVELLWENGQLVVQGQSNRPKKSFSTSNASGQTGKAHDKN----GNVKMGRFSSMDQVV 126
           +FVEL+WE GQ+++QGQS+R +KS  +++    T K  DK+     N KMG+F SMD ++
Sbjct: 31  DFVELVWEGGQIMMQGQSSRARKSPLSNSFPSHTPKPRDKDTGHGTNSKMGKFGSMDFIL 90

Query: 125 DELSPVVPSV-VGLNSQXXXXXXXXXXXXNGSWMNYPIEDPL 3
           ++    VPS  +GL+                 W+NYPI++ L
Sbjct: 91  NDFPLSVPSAEMGLSQDDDMV----------PWLNYPIDESL 122


>emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
          Length = 627

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 5/102 (4%)
 Frame = -3

Query: 293 EFVELLWENGQLVVQGQSNRPKKSFSTSNASGQTGKAHDKN----GNVKMGRFSSMDQVV 126
           +FVEL+WE GQ+++QGQS+R +KS  +++    T K  DK+     N KMG+F SMD ++
Sbjct: 31  DFVELVWEGGQIMMQGQSSRARKSPLSNSFPSHTPKPRDKDTGHGTNSKMGKFGSMDFIL 90

Query: 125 DELSPVVPSV-VGLNSQXXXXXXXXXXXXNGSWMNYPIEDPL 3
           ++    VPS  +GL+                 W+NYPI++ L
Sbjct: 91  NDFPLSVPSAEMGLSQDDDMV----------PWLNYPIDESL 122


>ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
           gi|223548548|gb|EEF50039.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 758

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 40/106 (37%), Positives = 56/106 (52%), Gaps = 9/106 (8%)
 Frame = -3

Query: 293 EFVELLWENGQLVVQGQSNRPKKSFSTSNASGQTGKAHDKN--------GNVKMGRFSSM 138
           +F+EL+WENGQ+    QS+R +K   ++    QT K  DK+         N KMGRF +M
Sbjct: 37  DFLELVWENGQI----QSSRARKI--SNGVQSQTSKFRDKDISIGIGNGNNTKMGRFGAM 90

Query: 137 DQVVDELSPVVPSV-VGLNSQXXXXXXXXXXXXNGSWMNYPIEDPL 3
           D  +DE+   VPSV +GLN +               W+N PI+D L
Sbjct: 91  DFGLDEVPMSVPSVEMGLNQEDDMV----------PWLNDPIDDSL 126


>ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
           gi|449522990|ref|XP_004168508.1| PREDICTED:
           transcription factor PIF3-like [Cucumis sativus]
          Length = 696

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 9/71 (12%)
 Frame = -3

Query: 284 ELLWENGQLVVQGQSNRPKKSFSTSNASGQTGKAHDKN---------GNVKMGRFSSMDQ 132
           EL+WENGQ+++QGQSNRP+K+ + + +  Q   +H             N KMG+F ++D 
Sbjct: 28  ELVWENGQILLQGQSNRPRKNSNLNTSQAQCLPSHSPRDRDRDVGYFNNAKMGKFGAIDS 87

Query: 131 VVDELSPVVPS 99
           VV ++    PS
Sbjct: 88  VVRDVMSTAPS 98


>gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
          Length = 713

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 7/104 (6%)
 Frame = -3

Query: 293 EFVELLWENGQLVVQGQSNRPKKSFSTSN-ASGQTGKAHDK---NGNV-KMGRFS-SMDQ 132
           +F+EL+WENGQ+V+QGQS+R +K+ S +   S  T K  D+   N N+ K G+F   +D 
Sbjct: 22  DFLELVWENGQVVMQGQSSRTRKNPSCNTLPSYNTPKNRDRDVGNSNIGKTGKFGFVVDS 81

Query: 131 VVDELSPVVP-SVVGLNSQXXXXXXXXXXXXNGSWMNYPIEDPL 3
            +DE+   VP S +GL+                 W+NY I++PL
Sbjct: 82  ELDEIPLSVPSSEMGLSEDDDTL----------PWLNYSIDEPL 115


Top