BLASTX nr result

ID: Dioscorea21_contig00016016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016016
         (1758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511411.1| protein binding protein, putative [Ricinus c...   575   e-161
ref|XP_002282957.1| PREDICTED: E3 ubiquitin-protein ligase SIS3 ...   569   e-160
ref|XP_002457972.1| hypothetical protein SORBIDRAFT_03g024030 [S...   565   e-158
ref|NP_001054629.1| Os05g0145000 [Oryza sativa Japonica Group] g...   560   e-157
ref|XP_004138113.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-...   560   e-157

>ref|XP_002511411.1| protein binding protein, putative [Ricinus communis]
            gi|223550526|gb|EEF52013.1| protein binding protein,
            putative [Ricinus communis]
          Length = 381

 Score =  575 bits (1481), Expect = e-161
 Identities = 271/354 (76%), Positives = 297/354 (83%), Gaps = 4/354 (1%)
 Frame = +3

Query: 183  MRGVDFKWYDGFFLSMLATSIIIVSINWKRYHFCKHPLHIWIVVDYTTVFIFRLLMFVDN 362
            +RGVDFKWYDGFFLSMLATS++IV+INWKRYH C +PLHIWIVVDYTTVF+FRLLMF+DN
Sbjct: 3    IRGVDFKWYDGFFLSMLATSVVIVAINWKRYHHCTYPLHIWIVVDYTTVFVFRLLMFIDN 62

Query: 363  GLAAGMGLDLGWQQRYAPFCGRXXXXXXXXXXXYPFLWVWTVIGTIWFTNARSCLPEEGQ 542
            GLAAGMGLD GWQQRYA FCGR           YPFLW WT+IGT+WFT+AR CLPEEGQ
Sbjct: 63   GLAAGMGLDFGWQQRYARFCGRIAVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEEGQ 122

Query: 543  KWGFLIWLLFSYCGLVCIACMCIGKWLTRRQAHLQRAQQGIPISEYGVLVDMIRVPDWAF 722
            KWGFLIWL+FSYCGL+CIACMC+GKWLTRRQAHL RAQQGIPISEYGVLVDM+RVPDWAF
Sbjct: 123  KWGFLIWLVFSYCGLLCIACMCMGKWLTRRQAHLLRAQQGIPISEYGVLVDMVRVPDWAF 182

Query: 723  EAAGQEMRVMAQE-TAYHPGLYLTATQREAVEALIQELPKFMLKAVPTDCSECPICLEEF 899
            EAAGQEMR M Q+  AYHPGLYLT TQREAVEALIQELPKF LK VPTDCSECPICLEEF
Sbjct: 183  EAAGQEMRGMGQDAAAYHPGLYLTPTQREAVEALIQELPKFRLKTVPTDCSECPICLEEF 242

Query: 900  RVGNEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVFPNLDLSALSNIRLDSERASASE 1079
             VGNEVRGLPCAHNFHVECID+WLRLNVKCPRCRCSVFPNLDLSALSN+R D ER  A++
Sbjct: 243  HVGNEVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRADPERPPAAD 302

Query: 1080 VXXXXXXXXXXXXGGQSYRVRLQGLLRPVRTENANADGS---ENGAQEYGDETL 1232
            V              QSY +RLQGLLRP+RTE+A +      +  A E+G E +
Sbjct: 303  V--TTNRYVRTQPSSQSYLLRLQGLLRPIRTEDAGSSSDVDVDLEAVEHGREVV 354


>ref|XP_002282957.1| PREDICTED: E3 ubiquitin-protein ligase SIS3 [Vitis vinifera]
          Length = 381

 Score =  569 bits (1467), Expect = e-160
 Identities = 271/345 (78%), Positives = 289/345 (83%), Gaps = 1/345 (0%)
 Frame = +3

Query: 183  MRGVDFKWYDGFFLSMLATSIIIVSINWKRYHFCKHPLHIWIVVDYTTVFIFRLLMFVDN 362
            +RGVDFKWYDGFFLSMLATS+IIV+INWKRY  C +PLHIWI+VDYTTVF+FRLLMFVDN
Sbjct: 3    IRGVDFKWYDGFFLSMLATSVIIVAINWKRYDLCTYPLHIWIMVDYTTVFVFRLLMFVDN 62

Query: 363  GLAAGMGLDLGWQQRYAPFCGRXXXXXXXXXXXYPFLWVWTVIGTIWFTNARSCLPEEGQ 542
            GLAAGMGLD GWQQRYA FCGR           YPFLW WTVIGT+WFT AR CLPEEGQ
Sbjct: 63   GLAAGMGLDFGWQQRYARFCGRIVVLSILSLLLYPFLWAWTVIGTLWFTRARDCLPEEGQ 122

Query: 543  KWGFLIWLLFSYCGLVCIACMCIGKWLTRRQAHLQRAQQGIPISEYGVLVDMIRVPDWAF 722
            KWGFLIWLLFSYCGL+CIACM +GKW +RRQAHL RAQQGIP+SEYGVLVDMIRVPDWAF
Sbjct: 123  KWGFLIWLLFSYCGLLCIACMSMGKWFSRRQAHLLRAQQGIPVSEYGVLVDMIRVPDWAF 182

Query: 723  EAAGQEMRVMAQE-TAYHPGLYLTATQREAVEALIQELPKFMLKAVPTDCSECPICLEEF 899
            EAAGQEMR M Q+  AYHPGLYLT TQREAVEALIQELPKF LKAVPTDCSECPICLEEF
Sbjct: 183  EAAGQEMRGMGQDAAAYHPGLYLTPTQREAVEALIQELPKFRLKAVPTDCSECPICLEEF 242

Query: 900  RVGNEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVFPNLDLSALSNIRLDSERASASE 1079
             VGNEVRGLPCAHNFHVECID+WLRLNVKCPRCRCSVFPNLDLSAL++ R DSER+SAS 
Sbjct: 243  HVGNEVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALTHFRADSERSSASV 302

Query: 1080 VXXXXXXXXXXXXGGQSYRVRLQGLLRPVRTENANADGSENGAQE 1214
            V              Q Y +RLQG LRPVRTENA A    + A E
Sbjct: 303  VTATRYVRVQPP--SQGYMLRLQGFLRPVRTENAGAGNDADNALE 345


>ref|XP_002457972.1| hypothetical protein SORBIDRAFT_03g024030 [Sorghum bicolor]
            gi|241929947|gb|EES03092.1| hypothetical protein
            SORBIDRAFT_03g024030 [Sorghum bicolor]
          Length = 374

 Score =  565 bits (1455), Expect = e-158
 Identities = 276/346 (79%), Positives = 289/346 (83%), Gaps = 7/346 (2%)
 Frame = +3

Query: 177  IPMRGVDFKWYDGFFLSMLATSIIIVSINWKRYHFCKHPLHIWIVVDYTTVFIFRLLMFV 356
            +PMRGVDFKWYDGFFLSMLATS+IIVSINWKRY  C HPLHIWIVVDYTTVFIFRLLMF+
Sbjct: 1    MPMRGVDFKWYDGFFLSMLATSVIIVSINWKRYRLCAHPLHIWIVVDYTTVFIFRLLMFL 60

Query: 357  DNGLAAGMGLDLGWQQRYAPFCGRXXXXXXXXXXXYPFLWVWTVIGTIWFTNARSCLPEE 536
            DNGLAAGMGLDLGWQQRYA FCGR           YPFLWVWTVIGT+WF+ AR CLPEE
Sbjct: 61   DNGLAAGMGLDLGWQQRYARFCGRIVVLSVLVLLLYPFLWVWTVIGTLWFSTARGCLPEE 120

Query: 537  GQKWGFLIWLLFSYCGLVCIACMCIGKWLTRRQAHLQRAQQGIPISEYGVLVDMIRVPDW 716
            GQKWGFLIWLLFSYCGL CIAC+ IGKWL RR A  QRAQQGIP+SEYGVLVDMIRVPDW
Sbjct: 121  GQKWGFLIWLLFSYCGLACIACVAIGKWLNRRHALQQRAQQGIPVSEYGVLVDMIRVPDW 180

Query: 717  AFEAAGQEMRVMAQETAYHPGLYLTATQREAVEALIQELPKFMLKAVPTDCSECPICLEE 896
            AFEA G EMRV  Q+TAYHPGLYLTA QREAVEALIQELPKF LKAVPTDCSECPICLEE
Sbjct: 181  AFEAVGLEMRV-GQDTAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEE 239

Query: 897  FRVGNEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVFPNLDLSALSNIRLDSE----R 1064
            F VGNEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVFPNLDLSAL+N+R  SE     
Sbjct: 240  FHVGNEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVFPNLDLSALNNLRSTSEPDHPS 299

Query: 1065 ASASEV--XXXXXXXXXXXXGGQSYRVRLQG-LLRPVRTENANADG 1193
            ASAS+V               GQSY VRLQG LLRPVR E+  +DG
Sbjct: 300  ASASDVTTATAATRYVRSQPAGQSYLVRLQGLLLRPVRHESVESDG 345


>ref|NP_001054629.1| Os05g0145000 [Oryza sativa Japonica Group] gi|51038194|gb|AAT93997.1|
            unknow protein [Oryza sativa Japonica Group]
            gi|113578180|dbj|BAF16543.1| Os05g0145000 [Oryza sativa
            Japonica Group] gi|215706903|dbj|BAG93363.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|222630174|gb|EEE62306.1| hypothetical protein
            OsJ_17095 [Oryza sativa Japonica Group]
          Length = 386

 Score =  560 bits (1444), Expect = e-157
 Identities = 275/350 (78%), Positives = 288/350 (82%), Gaps = 8/350 (2%)
 Frame = +3

Query: 183  MRGVDFKWYDGFFLSMLATSIIIVSINWKRYHFCKHPLHIWIVVDYTTVFIFRLLMFVDN 362
            MRGVDFKWYDGFFLSMLATS+IIVSINWKRY  C HPLHIWIVVDYTTVFIFRLLMFVDN
Sbjct: 3    MRGVDFKWYDGFFLSMLATSLIIVSINWKRYRLCAHPLHIWIVVDYTTVFIFRLLMFVDN 62

Query: 363  GLAAGMGLDLGWQQRYAPFCGRXXXXXXXXXXXYPFLWVWTVIGTIWFTNARSCLPEEGQ 542
            GLAAGMGLDLGWQQRYA FCGR           YPFLWVWTVIGT+WF+ AR CLPEEGQ
Sbjct: 63   GLAAGMGLDLGWQQRYARFCGRIVVLSVLVLLLYPFLWVWTVIGTLWFSTARGCLPEEGQ 122

Query: 543  KWGFLIWLLFSYCGLVCIACMCIGKWLTRRQAHLQRAQQGIPISEYGVLVDMIRVPDWAF 722
            KWGFLIWLLFSYCGL CIAC+ +GKWL+RR A  QRAQQGIP+SEYGVLVDMIRVPDWAF
Sbjct: 123  KWGFLIWLLFSYCGLACIACVAVGKWLSRRHALQQRAQQGIPVSEYGVLVDMIRVPDWAF 182

Query: 723  EAAGQEMRVMAQETAYHPGLYLTATQREAVEALIQELPKFMLKAVPTDCSECPICLEEFR 902
            EA G EMR M Q+TAYHPGLYLTA QREAVEALIQELPKF LKAVPTDCSECPICLEEF 
Sbjct: 183  EAVGLEMRGMGQDTAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFH 242

Query: 903  VGNEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVFPNLDLSALSNIRLDSE--RASAS 1076
            VGNEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVFPNLDLSAL+N+R  SE  R SAS
Sbjct: 243  VGNEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVFPNLDLSALNNLRPSSEPDRPSAS 302

Query: 1077 EV--XXXXXXXXXXXXGGQSYRVRLQG-LLRPVRTENANAD---GSENGA 1208
            EV               GQSY +RLQG LLR V   +   D    +ENGA
Sbjct: 303  EVTAATMARYVRSSQPAGQSYLLRLQGLLLRQVVVRHGGGDDMASAENGA 352


>ref|XP_004138113.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Cucumis sativus]
            gi|449518937|ref|XP_004166492.1| PREDICTED: E3
            ubiquitin-protein ligase SIS3-like [Cucumis sativus]
          Length = 377

 Score =  560 bits (1443), Expect = e-157
 Identities = 267/337 (79%), Positives = 282/337 (83%), Gaps = 1/337 (0%)
 Frame = +3

Query: 186  RGVDFKWYDGFFLSMLATSIIIVSINWKRYHFCKHPLHIWIVVDYTTVFIFRLLMFVDNG 365
            RGVDFKWYDGFFLSMLATS++IVSINWKRYH C HPLHIWIVVDYTTVF+FRLLMFVDNG
Sbjct: 4    RGVDFKWYDGFFLSMLATSVVIVSINWKRYHTCVHPLHIWIVVDYTTVFVFRLLMFVDNG 63

Query: 366  LAAGMGLDLGWQQRYAPFCGRXXXXXXXXXXXYPFLWVWTVIGTIWFTNARSCLPEEGQK 545
            LAAGMGLD GWQQRYA FCGR           YPFLW WT IGTIWF  A  CLPE+GQK
Sbjct: 64   LAAGMGLDFGWQQRYARFCGRIVVLSVLAVLLYPFLWAWTAIGTIWFREAHKCLPEQGQK 123

Query: 546  WGFLIWLLFSYCGLVCIACMCIGKWLTRRQAHLQRAQQGIPISEYGVLVDMIRVPDWAFE 725
            WGFLIWLLFSYC LVCIACM +GKWLTRRQA L RAQQGIP+SEYGVLVDM+RVPDWAFE
Sbjct: 124  WGFLIWLLFSYCALVCIACMSLGKWLTRRQALLFRAQQGIPVSEYGVLVDMVRVPDWAFE 183

Query: 726  AAGQEMRVMAQE-TAYHPGLYLTATQREAVEALIQELPKFMLKAVPTDCSECPICLEEFR 902
            AAGQE RVM Q+  AYHPGLYLT  QREAVEALI+ELPKF LKAVPTDCSECPICLEEF 
Sbjct: 184  AAGQETRVMGQDAAAYHPGLYLTPAQREAVEALIEELPKFRLKAVPTDCSECPICLEEFH 243

Query: 903  VGNEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVFPNLDLSALSNIRLDSERASASEV 1082
            VGNEVRGLPCAHNFHV CID+WLRLNVKCPRCRCSVFPNLDLSALSN+R D++R SAS +
Sbjct: 244  VGNEVRGLPCAHNFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRSDTDRPSASVL 303

Query: 1083 XXXXXXXXXXXXGGQSYRVRLQGLLRPVRTENANADG 1193
                          QSY VRLQGLLRPVRTE  +A G
Sbjct: 304  --TANRYVGSQPSSQSYLVRLQGLLRPVRTEENDAHG 338


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