BLASTX nr result

ID: Dioscorea21_contig00016015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016015
         (799 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18106.3| unnamed protein product [Vitis vinifera]              186   5e-45
ref|XP_002263634.1| PREDICTED: BRCA1-A complex subunit Abraxas [...   186   5e-45
ref|XP_002323616.1| predicted protein [Populus trichocarpa] gi|2...   184   1e-44
ref|XP_004148597.1| PREDICTED: BRCA1-A complex subunit Abraxas-l...   179   8e-43
ref|XP_002884696.1| hypothetical protein ARALYDRAFT_478180 [Arab...   179   8e-43

>emb|CBI18106.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  186 bits (472), Expect = 5e-45
 Identities = 118/265 (44%), Positives = 158/265 (59%), Gaps = 12/265 (4%)
 Frame = +1

Query: 13   DDLGPSPSP-TLAAVVTXXXXXXXXXXFFDPLGRIDSNS-SFLRSPPVPGSHLIGWFSAR 186
            D LG S  P T  A V+          F+D  G+++  +   L +  VP   LIGWFS R
Sbjct: 368  DPLGSSSDPSTFVATVSGFLCSGTIDSFYDSSGQVNVLALRRLLADRVPLRSLIGWFSGR 427

Query: 187  RRSPLRPSMRERAVSLSL-----FKSVIQDSADFSARPSVFLLLSSSEWGNQAVHTHDYR 351
            RRSPLRPS+RE +V+  L     F   I++S   + RPS+FLL +S    +Q +HTH+Y+
Sbjct: 428  RRSPLRPSLRESSVTACLSTKAQFSFPIENSLS-NFRPSLFLLFASP-LSDQVIHTHEYK 485

Query: 352  AFVICPSG-ALEPRSVSIVNVGPAFRGQYGAFTPESPFPWIPM----APRWKDDDGGERR 516
            A+  C S   LEP+S+ IVN+GPAFRG YG+F+P SPFP +      +P  +DD    R 
Sbjct: 486  AYQYCLSSQTLEPKSIDIVNIGPAFRGHYGSFSPSSPFPSLACDLRGSPMAEDDTDATRV 545

Query: 517  SLNGLRQVAHEQRVLDASAEGFGIERLGSLVGDGAAEYTSEVEDLYKKMLVKLEGLARKV 696
            S       A  QR LD  AEG  I  L  L+G  A  YT+ +EDLY+KML KL+ LAR V
Sbjct: 546  SK------AQAQRELDTCAEGVQIGSLRRLMGSEATNYTAGLEDLYEKMLAKLDSLARLV 599

Query: 697  EESNVRVLEQESRNIELRKKLAGLD 771
            E+++ +V EQES N++LR K+AG D
Sbjct: 600  EKTSAKVHEQESHNVKLRYKVAGYD 624


>ref|XP_002263634.1| PREDICTED: BRCA1-A complex subunit Abraxas [Vitis vinifera]
          Length = 306

 Score =  186 bits (472), Expect = 5e-45
 Identities = 118/265 (44%), Positives = 158/265 (59%), Gaps = 12/265 (4%)
 Frame = +1

Query: 13  DDLGPSPSP-TLAAVVTXXXXXXXXXXFFDPLGRIDSNS-SFLRSPPVPGSHLIGWFSAR 186
           D LG S  P T  A V+          F+D  G+++  +   L +  VP   LIGWFS R
Sbjct: 50  DPLGSSSDPSTFVATVSGFLCSGTIDSFYDSSGQVNVLALRRLLADRVPLRSLIGWFSGR 109

Query: 187 RRSPLRPSMRERAVSLSL-----FKSVIQDSADFSARPSVFLLLSSSEWGNQAVHTHDYR 351
           RRSPLRPS+RE +V+  L     F   I++S   + RPS+FLL +S    +Q +HTH+Y+
Sbjct: 110 RRSPLRPSLRESSVTACLSTKAQFSFPIENSLS-NFRPSLFLLFASP-LSDQVIHTHEYK 167

Query: 352 AFVICPSG-ALEPRSVSIVNVGPAFRGQYGAFTPESPFPWIPM----APRWKDDDGGERR 516
           A+  C S   LEP+S+ IVN+GPAFRG YG+F+P SPFP +      +P  +DD    R 
Sbjct: 168 AYQYCLSSQTLEPKSIDIVNIGPAFRGHYGSFSPSSPFPSLACDLRGSPMAEDDTDATRV 227

Query: 517 SLNGLRQVAHEQRVLDASAEGFGIERLGSLVGDGAAEYTSEVEDLYKKMLVKLEGLARKV 696
           S       A  QR LD  AEG  I  L  L+G  A  YT+ +EDLY+KML KL+ LAR V
Sbjct: 228 SK------AQAQRELDTCAEGVQIGSLRRLMGSEATNYTAGLEDLYEKMLAKLDSLARLV 281

Query: 697 EESNVRVLEQESRNIELRKKLAGLD 771
           E+++ +V EQES N++LR K+AG D
Sbjct: 282 EKTSAKVHEQESHNVKLRYKVAGYD 306


>ref|XP_002323616.1| predicted protein [Populus trichocarpa] gi|222868246|gb|EEF05377.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score =  184 bits (468), Expect = 1e-44
 Identities = 108/261 (41%), Positives = 148/261 (56%), Gaps = 10/261 (3%)
 Frame = +1

Query: 10  TDDLGP-SPSPTLAAVVTXXXXXXXXXXFFDPLGRIDSNSSFLRSPPVPG--------SH 162
           TDD  P +P   + A +T          F+D LGR+DS +      P           S+
Sbjct: 47  TDDNTPQNPDSNVIATITSFFCPNIPLSFYDSLGRVDSVTLHRLVSPTTHQSNSSSSTSN 106

Query: 163 LIGWFSARRRSPLRPSMRERAVSLSLFKSVIQDSADFSARPSVFLLLSSSEWGNQAVHTH 342
            +GWFSARR+SP+RPSMRE  VS SL +       +    P VFLL ++   G    HTH
Sbjct: 107 FLGWFSARRKSPIRPSMREFCVSQSLSRLKTAAKGEKDLNPCVFLLFTTPVQGELLYHTH 166

Query: 343 DYRAFVI-CPSGALEPRSVSIVNVGPAFRGQYGAFTPESPFPWIPMAPRWKDDDGGERRS 519
           +YRA+     S   +P+S+ I N+GP FRG YG F+P SPFP +  A    D+ G     
Sbjct: 167 EYRAYQFRVNSRCFDPKSIGIDNIGPDFRGNYGCFSPNSPFPELKCASAMNDEVG---EG 223

Query: 520 LNGLRQVAHEQRVLDASAEGFGIERLGSLVGDGAAEYTSEVEDLYKKMLVKLEGLARKVE 699
           LN + +V ++Q+ LD  AEGF ++ LG L+G      T  +EDLY+KML KL+ LAR+VE
Sbjct: 224 LNRMDRVLNDQKELDMVAEGFCVKDLGKLMGSETLNSTMSLEDLYEKMLGKLDNLARQVE 283

Query: 700 ESNVRVLEQESRNIELRKKLA 762
           +SN +VLE E+ N +LR K+A
Sbjct: 284 KSNAKVLEMENHNRKLRYKIA 304


>ref|XP_004148597.1| PREDICTED: BRCA1-A complex subunit Abraxas-like [Cucumis sativus]
           gi|449530041|ref|XP_004172005.1| PREDICTED: BRCA1-A
           complex subunit Abraxas-like [Cucumis sativus]
          Length = 322

 Score =  179 bits (453), Expect = 8e-43
 Identities = 115/261 (44%), Positives = 152/261 (58%), Gaps = 23/261 (8%)
 Frame = +1

Query: 49  AVVTXXXXXXXXXXFFDPLGRIDSNS---------SFLRSPPVPGSHLIGWFSARRRSPL 201
           A VT          F+D LGR+DS S         S  ++   P   L+GWFS RRR+ L
Sbjct: 63  ATVTGFLCSGSTNSFYDSLGRVDSQSLNRLLDRHQSDGQAQAQPHDSLLGWFSGRRRTQL 122

Query: 202 RPSMRERAVSLSL-----FKSVIQDSAD-FSARPSVFLLLSSSEWGNQAVHTHDYRAFVI 363
           RPSMRE  VS SL         ++D+ +  +  PSVFLLL+S    +Q +HTH+YRAF  
Sbjct: 123 RPSMREYLVSSSLSSMKQLSFPVKDAVNPTNLIPSVFLLLTSP-LSDQIIHTHEYRAFQF 181

Query: 364 CPSGAL-EPRSVSIVNVGPAFRGQYGAFTPESPFPWI-------PMAPRWKDDDGGERRS 519
             S    EP+S+ IVN+GPAFRG YG+F P SPFP +       PM     DD+      
Sbjct: 182 RSSNEFFEPKSIDIVNIGPAFRGHYGSFIPNSPFPHLLCEMRASPMNEDKNDDN------ 235

Query: 520 LNGLRQVAHEQRVLDASAEGFGIERLGSLVGDGAAEYTSEVEDLYKKMLVKLEGLARKVE 699
           LN ++Q +  Q+ ++  AEGF +  L  L+G  AA YT+ +EDLY+KML K E LAR VE
Sbjct: 236 LNMMKQNSKYQKQMNVCAEGFDVGNLTRLLGSEAANYTAGLEDLYEKMLAKTESLARLVE 295

Query: 700 ESNVRVLEQESRNIELRKKLA 762
           ES+ +VLEQE+ N +LR K+A
Sbjct: 296 ESSAQVLEQENHNRKLRYKVA 316


>ref|XP_002884696.1| hypothetical protein ARALYDRAFT_478180 [Arabidopsis lyrata subsp.
           lyrata] gi|297330536|gb|EFH60955.1| hypothetical protein
           ARALYDRAFT_478180 [Arabidopsis lyrata subsp. lyrata]
          Length = 312

 Score =  179 bits (453), Expect = 8e-43
 Identities = 117/264 (44%), Positives = 159/264 (60%), Gaps = 12/264 (4%)
 Frame = +1

Query: 7   PTDDLGPSPSPTLAAVVTXXXXXXXXXXFFDPLGRIDS---NSSFLRSPPVPGSHLIGWF 177
           P D    S S  + A VT          F+DPLGR+DS   +S  + SP      LIGWF
Sbjct: 51  PADFASSSSSDQIVATVTSFICSGKTVSFYDPLGRVDSRRIDSLRIDSP----DRLIGWF 106

Query: 178 SARRRSPLRPSMRERAVSLSL---FKSVIQDSADFSAR---PSVFLLLSSSEWGNQAVHT 339
           SARR++  RPSMRE AV+ SL   F   I+DS + ++     SVF LL++    NQ +HT
Sbjct: 107 SARRKTVNRPSMRELAVASSLSSQFHLPIEDSQNPNSTNMASSVFFLLTTPST-NQCIHT 165

Query: 340 HDYRAFVICPSGA-LEPRSVSIVNVGPAFRGQYGAFTPESPFPWI--PMAPRWKDDDGGE 510
           H+YRA+   PS   LEPRSV+IVN+GPAFRG YG+F+P+S FP +   ++      D  E
Sbjct: 166 HEYRAYQFRPSKQRLEPRSVAIVNIGPAFRGHYGSFSPKSGFPPLICELSSSAMSVDCDE 225

Query: 511 RRSLNGLRQVAHEQRVLDASAEGFGIERLGSLVGDGAAEYTSEVEDLYKKMLVKLEGLAR 690
             SL+  +Q A +Q+ +DA AEG  +  L  LVG  AA YT  +E++Y++ML K+E LA 
Sbjct: 226 S-SLSAKKQSAKDQKEIDALAEGLQVGDLKRLVGAEAANYTGGIEEMYERMLAKIESLAS 284

Query: 691 KVEESNVRVLEQESRNIELRKKLA 762
            VE+S+ RV EQ   N +LR ++A
Sbjct: 285 DVEKSSARVFEQVKHNRKLRNRVA 308


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