BLASTX nr result
ID: Dioscorea21_contig00016009
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00016009
(1719 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002884901.1| ATELC [Arabidopsis lyrata subsp. lyrata] gi|... 337 e-100
ref|XP_002299175.1| predicted protein [Populus trichocarpa] gi|2... 332 e-100
ref|NP_566423.1| protein ELC [Arabidopsis thaliana] gi|75273254|... 315 6e-94
ref|XP_002271662.1| PREDICTED: protein ELC [Vitis vinifera] 255 3e-65
ref|XP_002525563.1| protein with unknown function [Ricinus commu... 251 3e-64
>ref|XP_002884901.1| ATELC [Arabidopsis lyrata subsp. lyrata] gi|297330741|gb|EFH61160.1|
ATELC [Arabidopsis lyrata subsp. lyrata]
Length = 397
Score = 337 bits (863), Expect(2) = e-100
Identities = 169/326 (51%), Positives = 222/326 (68%), Gaps = 7/326 (2%)
Frame = -2
Query: 1412 QAEGTIPIAYQGAVYNLPASIWLLETYPRSPPAVFLTPTQSMLVKPHHPLVDRSGSVHSP 1233
QA+GTIP+ + G YN+P IWLLE+YPR PP V++ PT M++K H V SG V P
Sbjct: 70 QADGTIPMPFHGVTYNIPVIIWLLESYPRHPPCVYVNPTADMIIKRPHAHVTPSGLVSLP 129
Query: 1232 YLLSWLFPSSNLVDLVRSLSHAFSLDPPLYSRQ-------TXXXXXXXXXXXXXXXXXXX 1074
YL +W+FPSSNLVDLV LS AF+ DPPLYSR+ +
Sbjct: 130 YLQNWVFPSSNLVDLVSDLSAAFARDPPLYSRRRPQPPPPSPPTGYDSSLTRPPSADQSL 189
Query: 1073 XXXXXXXXXXXXXXXXXXXXXXXXXVEDPAEVFRRNAISKLVDTIHGDLAALRKSRELEV 894
+D AEVF+RNAI+K+V+ +HGDL ++R++RE E
Sbjct: 190 ARPFPPSPYGGGGRVQVQHVHHQQQSDDAAEVFKRNAINKMVEMVHGDLVSMRRAREAEA 249
Query: 893 EGLFTTQAGLKQREEELRKGLREMLDEKEALEQQLQMVLMNTDVLEGWVRENEGRSRRIG 714
E L + QAGLK+REEEL +GLREM++EKE LEQQLQ++ MNTD+L+ WVREN+G+++ +
Sbjct: 250 EELLSLQAGLKRREEELNRGLREMVEEKETLEQQLQVISMNTDILDSWVRENQGKTKNLV 309
Query: 713 DVDVDDAFEPSDPLSKQMLQCTAADLAVEDVIYSLDKAAQEGSISFEMYLKNVRALSREQ 534
D+DVD+AFE D LSKQML+CTA DLA+ED IYSLDK+ Q+G + F+ YL+NVR LSREQ
Sbjct: 310 DLDVDNAFECGDTLSKQMLECTALDLAIEDAIYSLDKSFQDGVVPFDQYLRNVRLLSREQ 369
Query: 533 FFHRATGAKVRAAQLQAQVTSMAARV 456
FFHRATG+KVRAAQ++ QV ++A R+
Sbjct: 370 FFHRATGSKVRAAQMEVQVAAIAGRL 395
Score = 57.4 bits (137), Expect(2) = e-100
Identities = 25/37 (67%), Positives = 32/37 (86%)
Frame = -3
Query: 1573 QYAQQFLTTALSQRGPSALPYAEDAKWLIRQHLVSLV 1463
Q QQFL++ALSQRGPS++PY E KWLIRQHL++L+
Sbjct: 9 QQIQQFLSSALSQRGPSSVPYEESNKWLIRQHLLNLI 45
>ref|XP_002299175.1| predicted protein [Populus trichocarpa] gi|222846433|gb|EEE83980.1|
predicted protein [Populus trichocarpa]
Length = 380
Score = 332 bits (850), Expect(2) = e-100
Identities = 171/319 (53%), Positives = 218/319 (68%), Gaps = 1/319 (0%)
Frame = -2
Query: 1412 QAEGTIPIAYQGAVYNLPASIWLLETYPRSPPAVFLTPTQSMLVKPHHPLVDRSGSVHSP 1233
QA+GT+P+ ++ YN+P IWL+E+YPR PP V++ PT+ M++K H V+ SG V P
Sbjct: 70 QADGTVPMTFESVTYNIPVIIWLIESYPRHPPCVYVNPTRDMVIKRSHSFVNPSGLVAVP 129
Query: 1232 YLLSWLFPSSNLVDLVRSLSHAFSLDPPLYSRQTXXXXXXXXXXXXXXXXXXXXXXXXXX 1053
YL +W++PSSNLVDL R LS F DPPL+S++
Sbjct: 130 YLQNWIYPSSNLVDLARELSMIFGRDPPLFSQRPRPSPNPSYHPNQSSLTNSSTFGSVGS 189
Query: 1052 XXXXXXXXXXXXXXXXXXVEDPAEVFRRNAISKLVDTIHGDLAALRKSRELEVEGLFTTQ 873
ED AEVF+RN I+KLV+ +HGD+ LRK+RE E+E LF+ Q
Sbjct: 190 GYPRQMGKAGT--------EDAAEVFKRNVINKLVENVHGDMLLLRKTRESEMENLFSAQ 241
Query: 872 AGLKQREEELRKGLREMLDEKEALEQQLQMVLMNTDVLEGWVRENEGRSRR-IGDVDVDD 696
A L++REEE+ KGL+EM DE E LE QLQ+VLMNTDVLE WVR+NEG+ + + D+DVD
Sbjct: 242 AVLRRREEEINKGLKEMRDEMEGLESQLQVVLMNTDVLEAWVRQNEGKVKGGMEDIDVDK 301
Query: 695 AFEPSDPLSKQMLQCTAADLAVEDVIYSLDKAAQEGSISFEMYLKNVRALSREQFFHRAT 516
AFE D LSKQML+CTAAD+A+EDV+YSLDKA QEG++ F YL+NVR LSREQFF+RAT
Sbjct: 302 AFECVDVLSKQMLECTAADMAIEDVVYSLDKAVQEGAMPFVQYLRNVRLLSREQFFNRAT 361
Query: 515 GAKVRAAQLQAQVTSMAAR 459
AKVRAAQ+QAQV SMAAR
Sbjct: 362 AAKVRAAQMQAQVASMAAR 380
Score = 62.4 bits (150), Expect(2) = e-100
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = -3
Query: 1573 QYAQQFLTTALSQRGPSALPYAEDAKWLIRQHLVSL 1466
Q QQFL++ LSQRGPSALPY ED KWLIRQHLVSL
Sbjct: 9 QAIQQFLSSVLSQRGPSALPYTEDTKWLIRQHLVSL 44
>ref|NP_566423.1| protein ELC [Arabidopsis thaliana] gi|75273254|sp|Q9LHG8.1|ELC_ARATH
RecName: Full=Protein ELC; Short=AtELC; AltName:
Full=ESCRT-I complex subunit VPS23 homolog 1; AltName:
Full=Vacuolar protein-sorting-associated protein 23
homolog 1 gi|12321968|gb|AAG51025.1|AC069474_24 unknown
protein; 81998-83194 [Arabidopsis thaliana]
gi|15795159|dbj|BAB03147.1| mouse and human tumor
susceptibility gene-like protein [Arabidopsis thaliana]
gi|15810489|gb|AAL07132.1| unknown protein [Arabidopsis
thaliana] gi|21593369|gb|AAM65318.1| unknown [Arabidopsis
thaliana] gi|22136968|gb|AAM91713.1| unknown protein
[Arabidopsis thaliana] gi|332641672|gb|AEE75193.1|
protein ELC [Arabidopsis thaliana]
Length = 398
Score = 315 bits (807), Expect(2) = 6e-94
Identities = 163/329 (49%), Positives = 216/329 (65%), Gaps = 10/329 (3%)
Frame = -2
Query: 1412 QAEGTIPIAYQGAVYNLPASIWLLETYPRSPPAVFLTPTQSMLVKPHHPLVDRSGSVHSP 1233
QA+GTIP+ + G YN+P IWLLE+YPR PP V++ PT M++K H V SG V P
Sbjct: 70 QADGTIPMPFHGVTYNIPVIIWLLESYPRHPPCVYVNPTADMIIKRPHAHVTPSGLVSLP 129
Query: 1232 YLLSWLFPSSNLVDLVRSLSHAFSLD----------PPLYSRQTXXXXXXXXXXXXXXXX 1083
YL +W++PSSNLVDLV LS AF+ D PP S T
Sbjct: 130 YLQNWVYPSSNLVDLVSDLSAAFARDPPLYSRRRPQPPPPSPPTVYDSSLSRPPSADQSL 189
Query: 1082 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDPAEVFRRNAISKLVDTIHGDLAALRKSRE 903
+D AEVF+RNAI+K+V+ +H DL ++R++RE
Sbjct: 190 PRPFPPSPYGGGVSRVQVQHVHHQQQS--DDAAEVFKRNAINKMVEMVHSDLVSMRRARE 247
Query: 902 LEVEGLFTTQAGLKQREEELRKGLREMLDEKEALEQQLQMVLMNTDVLEGWVRENEGRSR 723
E E L + QAGLK+RE+EL GL+EM++EKE LEQQLQ++ MNTD+L+ WVREN+G+++
Sbjct: 248 AEAEELLSLQAGLKRREDELNIGLKEMVEEKETLEQQLQIISMNTDILDSWVRENQGKTK 307
Query: 722 RIGDVDVDDAFEPSDPLSKQMLQCTAADLAVEDVIYSLDKAAQEGSISFEMYLKNVRALS 543
+ D+DVD+AFE D LSKQML+CTA DLA+ED IYSLDK+ Q+G + F+ YL+NVR LS
Sbjct: 308 NLVDLDVDNAFECGDTLSKQMLECTALDLAIEDAIYSLDKSFQDGVVPFDQYLRNVRLLS 367
Query: 542 REQFFHRATGAKVRAAQLQAQVTSMAARV 456
REQFFHRATG+KVRAAQ++ QV ++A R+
Sbjct: 368 REQFFHRATGSKVRAAQMEVQVAAIAGRL 396
Score = 57.8 bits (138), Expect(2) = 6e-94
Identities = 25/37 (67%), Positives = 32/37 (86%)
Frame = -3
Query: 1573 QYAQQFLTTALSQRGPSALPYAEDAKWLIRQHLVSLV 1463
Q QQFL++ALSQRGPS++PY E KWLIRQHL++L+
Sbjct: 9 QQVQQFLSSALSQRGPSSVPYEESNKWLIRQHLLNLI 45
>ref|XP_002271662.1| PREDICTED: protein ELC [Vitis vinifera]
Length = 425
Score = 255 bits (651), Expect = 3e-65
Identities = 125/185 (67%), Positives = 154/185 (83%)
Frame = -2
Query: 995 EDPAEVFRRNAISKLVDTIHGDLAALRKSRELEVEGLFTTQAGLKQREEELRKGLREMLD 816
EDP EVFRRNA++KLV+++H D+ LRK+ E E+EG+F Q L+QREE+L +G++E+ D
Sbjct: 240 EDPNEVFRRNAVNKLVESLHADVGVLRKTSEAEMEGMFGAQGVLRQREEQLSRGVKELQD 299
Query: 815 EKEALEQQLQMVLMNTDVLEGWVRENEGRSRRIGDVDVDDAFEPSDPLSKQMLQCTAADL 636
EKE LEQQLQMVLMN DVLE W+RENE + +G++DVD+AFEP D LSKQML CT++DL
Sbjct: 300 EKEGLEQQLQMVLMNADVLEAWLRENEVKLGNMGNLDVDNAFEPCDALSKQMLDCTSSDL 359
Query: 635 AVEDVIYSLDKAAQEGSISFEMYLKNVRALSREQFFHRATGAKVRAAQLQAQVTSMAARV 456
++ED IY+LDKA QEGSISF+ YLKNVR LSREQFFHRA AK+RAAQ+QAQV SMAARV
Sbjct: 360 SIEDTIYALDKAVQEGSISFDQYLKNVRLLSREQFFHRAMCAKLRAAQMQAQVASMAARV 419
Query: 455 PPQYA 441
QYA
Sbjct: 420 SSQYA 424
Score = 119 bits (299), Expect(2) = 1e-36
Identities = 52/93 (55%), Positives = 70/93 (75%)
Frame = -2
Query: 1412 QAEGTIPIAYQGAVYNLPASIWLLETYPRSPPAVFLTPTQSMLVKPHHPLVDRSGSVHSP 1233
Q++GT+P+ Y YN+P IWL+E+YPR PP V++ PT+ M++K H V+ SG V P
Sbjct: 82 QSDGTVPMLYLDVTYNIPIIIWLMESYPRHPPCVYVNPTRDMVIKRPHSHVNPSGMVSIP 141
Query: 1232 YLLSWLFPSSNLVDLVRSLSHAFSLDPPLYSRQ 1134
YL SW++PSSNLVDL R+LSH FS DPPLYS++
Sbjct: 142 YLHSWVYPSSNLVDLARNLSHVFSRDPPLYSQR 174
Score = 61.6 bits (148), Expect(2) = 1e-36
Identities = 28/36 (77%), Positives = 32/36 (88%)
Frame = -3
Query: 1573 QYAQQFLTTALSQRGPSALPYAEDAKWLIRQHLVSL 1466
Q QQ+L++ LSQRGPSALPYAED KWLIRQHL+SL
Sbjct: 21 QLTQQWLSSVLSQRGPSALPYAEDVKWLIRQHLLSL 56
>ref|XP_002525563.1| protein with unknown function [Ricinus communis]
gi|223535142|gb|EEF36822.1| protein with unknown
function [Ricinus communis]
Length = 419
Score = 251 bits (642), Expect = 3e-64
Identities = 128/188 (68%), Positives = 157/188 (83%), Gaps = 2/188 (1%)
Frame = -2
Query: 995 EDPAEVFRRNAISKLVDTIHGDLAALRKSRELEVEGLFTTQAGLKQREEELRKGLREMLD 816
ED AEV++RNAI+K+V+++HGD+ LRK+RE E+EGLF+ QA L++REEE+ KGL+EM D
Sbjct: 233 EDAAEVYKRNAINKIVESVHGDVLQLRKAREAEMEGLFSAQAVLRRREEEINKGLKEMQD 292
Query: 815 EKEALEQQLQMVLMNTDVLEGWVRENEGRSRRIG--DVDVDDAFEPSDPLSKQMLQCTAA 642
EKE LE QLQ+VLMNTDVLE WVRENEG+ + G DVDVD+ FE +D LSKQML+CT+A
Sbjct: 293 EKEGLEAQLQVVLMNTDVLEAWVRENEGKVKAKGHVDVDVDNVFECTDALSKQMLECTSA 352
Query: 641 DLAVEDVIYSLDKAAQEGSISFEMYLKNVRALSREQFFHRATGAKVRAAQLQAQVTSMAA 462
DLA+EDV+YSLDKA QEG + F+ YL+NVR LSREQFF RAT AKVRA Q+QAQV SMAA
Sbjct: 353 DLAIEDVVYSLDKAVQEGVVPFDQYLRNVRLLSREQFFQRATAAKVRATQMQAQVASMAA 412
Query: 461 RVPPQYAS 438
R+ YAS
Sbjct: 413 RL-SHYAS 419
Score = 120 bits (302), Expect(2) = 5e-37
Identities = 52/93 (55%), Positives = 70/93 (75%)
Frame = -2
Query: 1412 QAEGTIPIAYQGAVYNLPASIWLLETYPRSPPAVFLTPTQSMLVKPHHPLVDRSGSVHSP 1233
QA+GTIP+ +QG YN+P +WL+E+YPR PP V++ PT+ M++K HP V+ SG V P
Sbjct: 76 QADGTIPMPFQGVTYNIPIIMWLMESYPRHPPCVYVNPTRDMIIKRPHPHVNPSGLVSVP 135
Query: 1232 YLLSWLFPSSNLVDLVRSLSHAFSLDPPLYSRQ 1134
YL +W++PSSNLVDLVR L F DPPLYS++
Sbjct: 136 YLQNWIYPSSNLVDLVRELGGVFGRDPPLYSQR 168
Score = 62.0 bits (149), Expect(2) = 5e-37
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = -3
Query: 1585 TQGAQYAQQFLTTALSQRGPSALPYAEDAKWLIRQHLVSLV 1463
T Q QQFL++ LSQRGPS+LPY ED KWLIRQHL+SL+
Sbjct: 11 TPNHQATQQFLSSVLSQRGPSSLPYIEDTKWLIRQHLLSLI 51