BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00016005
         (1153 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 is...   551   e-154
ref|XP_002520330.1| replication factor C / DNA polymerase III ga...   550   e-154
emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]   549   e-154
ref|XP_002307456.1| predicted protein [Populus trichocarpa] gi|2...   546   e-153
ref|XP_002468414.1| hypothetical protein SORBIDRAFT_01g045530 [S...   542   e-152

>ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 isoform 1 [Vitis vinifera]
            gi|302141781|emb|CBI18984.3| unnamed protein product
            [Vitis vinifera]
          Length = 341

 Score =  551 bits (1420), Expect = e-154
 Identities = 281/333 (84%), Positives = 296/333 (88%), Gaps = 1/333 (0%)
 Frame = +3

Query: 111  QPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLFG 290
            QPWVEKYRPKQVKDVAHQDEVVRVLTNTLET NCPHMLFYGPPGTGKTTTALAIAHQLFG
Sbjct: 9    QPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTALAIAHQLFG 68

Query: 291  PELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQG-YPCPPYKIIILDEADSMT 467
            PELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSG RQG YPCPPYKIIILDEADSMT
Sbjct: 69   PELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGHRQGGYPCPPYKIIILDEADSMT 128

Query: 468  EDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSDEIMSRRILHICR 647
            EDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLS+EIMS RILHIC+
Sbjct: 129  EDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMSSRILHICK 188

Query: 648  EEGLDLDSEALSTLGSIAQGDLRRAITYLQSAARLFGXXXXXXXXXXXXGVIPEEIVQAF 827
            EE L+LDSEALSTL SI+QGDLRRAITYLQ AARLFG            GV+P+ +VQA 
Sbjct: 189  EEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGVVPQHVVQAL 248

Query: 828  LAACKSNDFDLADKEVGSLIADGYPVSQMLSQLLEVIVSANDISDEQKARICKRLGETDK 1007
             AACKS DFD A+KEV ++IA+GYPVSQML QL +V+V A DISDEQKARICKRL E DK
Sbjct: 249  FAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKARICKRLAEADK 307

Query: 1008 CLVDGADEYLQLLNVASHTMRAFSNMPEESQFE 1106
            CLVDGADEYLQLL+VAS+ MRA  NMPEE   E
Sbjct: 308  CLVDGADEYLQLLDVASNAMRALCNMPEEFPHE 340


>ref|XP_002520330.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223540549|gb|EEF42116.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 342

 Score =  550 bits (1418), Expect = e-154
 Identities = 275/333 (82%), Positives = 300/333 (90%), Gaps = 1/333 (0%)
 Frame = +3

Query: 111  QPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLFG 290
            QPWVEKYRPKQVKDVAHQ+EVVRVLTNTLET+NCPHMLFYGPPGTGKTTTALAIAHQLFG
Sbjct: 9    QPWVEKYRPKQVKDVAHQEEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTALAIAHQLFG 68

Query: 291  PELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQG-YPCPPYKIIILDEADSMT 467
            PELYKSRVLELNASDDRGINVVRTKIK+FAAVAVGSGQR G YPCPPYKIIILDEADSMT
Sbjct: 69   PELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSGQRAGGYPCPPYKIIILDEADSMT 128

Query: 468  EDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSDEIMSRRILHICR 647
            EDAQNALRRTMETYSKVTRFFF+CNYISRIIEPLASRCAKFRFKPLS+EIMS R+LHICR
Sbjct: 129  EDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEEIMSSRVLHICR 188

Query: 648  EEGLDLDSEALSTLGSIAQGDLRRAITYLQSAARLFGXXXXXXXXXXXXGVIPEEIVQAF 827
            EEGL+LD+EALSTL  ++QGDLRRAITYLQ AARL+G            GVIP+E V A 
Sbjct: 189  EEGLNLDAEALSTLSYVSQGDLRRAITYLQGAARLYGSTISSKDLISVSGVIPQEAVGAL 248

Query: 828  LAACKSNDFDLADKEVGSLIADGYPVSQMLSQLLEVIVSANDISDEQKARICKRLGETDK 1007
             AAC+S DFD+A+KEV ++IA+GYPVSQML QLLEV+V A+DISDEQKA+ICK LG  DK
Sbjct: 249  YAACRSGDFDMANKEVNNIIAEGYPVSQMLVQLLEVVVEADDISDEQKAQICKSLGAADK 308

Query: 1008 CLVDGADEYLQLLNVASHTMRAFSNMPEESQFE 1106
            CLVDGADEYLQLL+VAS+TMRA  NMP+E  +E
Sbjct: 309  CLVDGADEYLQLLDVASNTMRALCNMPQEFPYE 341


>emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]
          Length = 341

 Score =  549 bits (1415), Expect = e-154
 Identities = 280/333 (84%), Positives = 295/333 (88%), Gaps = 1/333 (0%)
 Frame = +3

Query: 111  QPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLFG 290
            QPWVEKYRPKQVKDVAHQDEVVRVLTNTLET NCPHMLFYGPPGTGKTTTALAIAHQLFG
Sbjct: 9    QPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTALAIAHQLFG 68

Query: 291  PELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQG-YPCPPYKIIILDEADSMT 467
            PELYKSRVLELNASDDRGINVVRTKIKDFA VAVGSG RQG YPCPPYKIIILDEADSMT
Sbjct: 69   PELYKSRVLELNASDDRGINVVRTKIKDFAXVAVGSGHRQGGYPCPPYKIIILDEADSMT 128

Query: 468  EDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSDEIMSRRILHICR 647
            EDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLS+EIMS RILHIC+
Sbjct: 129  EDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMSSRILHICK 188

Query: 648  EEGLDLDSEALSTLGSIAQGDLRRAITYLQSAARLFGXXXXXXXXXXXXGVIPEEIVQAF 827
            EE L+LDSEALSTL SI+QGDLRRAITYLQ AARLFG            GV+P+ +VQA 
Sbjct: 189  EEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGVVPQHVVQAL 248

Query: 828  LAACKSNDFDLADKEVGSLIADGYPVSQMLSQLLEVIVSANDISDEQKARICKRLGETDK 1007
             AACKS DFD A+KEV ++IA+GYPVSQML QL +V+V A DISDEQKARICKRL E DK
Sbjct: 249  FAACKSGDFDSANKEVNNVIAEGYPVSQMLYQLFDVVVEA-DISDEQKARICKRLAEADK 307

Query: 1008 CLVDGADEYLQLLNVASHTMRAFSNMPEESQFE 1106
            CLVDGADEYLQLL+VAS+ MRA  NMPEE   E
Sbjct: 308  CLVDGADEYLQLLDVASNAMRALCNMPEEFPHE 340


>ref|XP_002307456.1| predicted protein [Populus trichocarpa] gi|222856905|gb|EEE94452.1|
            predicted protein [Populus trichocarpa]
          Length = 342

 Score =  546 bits (1407), Expect = e-153
 Identities = 272/333 (81%), Positives = 293/333 (87%), Gaps = 1/333 (0%)
 Frame = +3

Query: 111  QPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLFG 290
            Q WVEKYRPKQ+KDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQL+G
Sbjct: 9    QQWVEKYRPKQIKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLYG 68

Query: 291  PELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQG-YPCPPYKIIILDEADSMT 467
            PELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQG YPCPPYKIIILDEADSMT
Sbjct: 69   PELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQGVYPCPPYKIIILDEADSMT 128

Query: 468  EDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSDEIMSRRILHICR 647
            EDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL +EIMS RILHIC 
Sbjct: 129  EDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEEIMSNRILHICN 188

Query: 648  EEGLDLDSEALSTLGSIAQGDLRRAITYLQSAARLFGXXXXXXXXXXXXGVIPEEIVQAF 827
            EEGL LD+EALSTL S++QGDLRRAITYLQ AARLFG            G IP E+ +A 
Sbjct: 189  EEGLTLDTEALSTLSSVSQGDLRRAITYLQGAARLFGSSISSKDLISVSGAIPREVTEAI 248

Query: 828  LAACKSNDFDLADKEVGSLIADGYPVSQMLSQLLEVIVSANDISDEQKARICKRLGETDK 1007
             AACK+ DFDLA+KEV  +IA+GYPVSQML+QL EV+V  +DISDEQKARICK L   DK
Sbjct: 249  YAACKNGDFDLANKEVNDVIAEGYPVSQMLAQLFEVVVEVDDISDEQKARICKSLATADK 308

Query: 1008 CLVDGADEYLQLLNVASHTMRAFSNMPEESQFE 1106
            CLVDGADEYLQLL+V S+TMR+  NMP+E  ++
Sbjct: 309  CLVDGADEYLQLLDVVSNTMRSLCNMPQEFSYD 341


>ref|XP_002468414.1| hypothetical protein SORBIDRAFT_01g045530 [Sorghum bicolor]
            gi|241922268|gb|EER95412.1| hypothetical protein
            SORBIDRAFT_01g045530 [Sorghum bicolor]
          Length = 339

 Score =  542 bits (1397), Expect = e-152
 Identities = 265/331 (80%), Positives = 302/331 (91%)
 Frame = +3

Query: 111  QPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLFG 290
            QPWVEKYRP+QVKDVAHQ+EV+RVLTNTL+TA+ PHMLFYGPPGTGKTTTALAIA+QL+G
Sbjct: 9    QPWVEKYRPRQVKDVAHQEEVIRVLTNTLQTADLPHMLFYGPPGTGKTTTALAIAYQLYG 68

Query: 291  PELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQGYPCPPYKIIILDEADSMTE 470
            PELYKSRVLELNASDDRGINVVRTKIKDFAAVAVG+ ++ GYPCPPYKIIILDEADSMTE
Sbjct: 69   PELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTARKAGYPCPPYKIIILDEADSMTE 128

Query: 471  DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSDEIMSRRILHICRE 650
            DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLS+E+MS RI+HIC E
Sbjct: 129  DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSSRIMHICNE 188

Query: 651  EGLDLDSEALSTLGSIAQGDLRRAITYLQSAARLFGXXXXXXXXXXXXGVIPEEIVQAFL 830
            EGL+LD++ALSTL +I+QGDLRRAITYLQSAARLFG            GVIPE++V++ L
Sbjct: 189  EGLNLDAQALSTLSAISQGDLRRAITYLQSAARLFGSSLSSSDLISVSGVIPEDVVKSLL 248

Query: 831  AACKSNDFDLADKEVGSLIADGYPVSQMLSQLLEVIVSANDISDEQKARICKRLGETDKC 1010
            AACKS +FD+A+KEV ++IADGYPVSQ+++Q L+VIVSA+DI D+QKARICK+LGETDKC
Sbjct: 249  AACKSGEFDVANKEVSNIIADGYPVSQLMAQFLDVIVSADDIQDDQKARICKKLGETDKC 308

Query: 1011 LVDGADEYLQLLNVASHTMRAFSNMPEESQF 1103
            LVDGADEYLQLL+VAS T+RA  NMP+   F
Sbjct: 309  LVDGADEYLQLLDVASETIRALFNMPQTLVF 339