BLASTX nr result

ID: Dioscorea21_contig00015386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015386
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGE46020.1| putative AT-hook DNA-binding protein [Elaeis guin...   104   7e-21
ref|XP_002275328.1| PREDICTED: uncharacterized protein LOC100263...   103   2e-20
emb|CAN64876.1| hypothetical protein VITISV_030792 [Vitis vinifera]   103   2e-20
gb|ADE76494.1| unknown [Picea sitchensis]                              96   4e-18
gb|ADE76393.1| unknown [Picea sitchensis]                              91   7e-17

>gb|AGE46020.1| putative AT-hook DNA-binding protein [Elaeis guineensis]
          Length = 362

 Score =  104 bits (260), Expect = 7e-21
 Identities = 57/97 (58%), Positives = 65/97 (67%), Gaps = 9/97 (9%)
 Frame = -3

Query: 266 RKYGPDGTMALSLTXXXXXXXXXXXXXXXXXXXXXXXS---------LKKSRGRPPGSGK 114
           RKYGPDGTM+L+LT                       +         +KK+RGRPPGSGK
Sbjct: 100 RKYGPDGTMSLALTTVSPTAAVSPGSGGFSPSSAGAGNPASSASAEAMKKARGRPPGSGK 159

Query: 113 KQQMAALGSAGIGFTPHIITVKAGEDVSSKIMSFSQN 3
           KQQ+AALGSAGIGFTPH+ITVKAGEDVSSKIMSFSQ+
Sbjct: 160 KQQLAALGSAGIGFTPHVITVKAGEDVSSKIMSFSQH 196


>ref|XP_002275328.1| PREDICTED: uncharacterized protein LOC100263332 [Vitis vinifera]
           gi|297745600|emb|CBI40765.3| unnamed protein product
           [Vitis vinifera]
          Length = 353

 Score =  103 bits (256), Expect = 2e-20
 Identities = 57/93 (61%), Positives = 63/93 (67%), Gaps = 5/93 (5%)
 Frame = -3

Query: 266 RKYGPDGTMALSLT-----XXXXXXXXXXXXXXXXXXXXXXXSLKKSRGRPPGSGKKQQM 102
           RKYGPDGTMAL+L+                            SLKK+RGRPPGS KKQQM
Sbjct: 93  RKYGPDGTMALALSPAPSGVNVSQSGGAFSSPPASAGSASPSSLKKARGRPPGSSKKQQM 152

Query: 101 AALGSAGIGFTPHIITVKAGEDVSSKIMSFSQN 3
            ALGSAG+GFTPH+ITVKAGEDVSSKIMSFSQ+
Sbjct: 153 EALGSAGVGFTPHVITVKAGEDVSSKIMSFSQH 185


>emb|CAN64876.1| hypothetical protein VITISV_030792 [Vitis vinifera]
          Length = 390

 Score =  103 bits (256), Expect = 2e-20
 Identities = 57/93 (61%), Positives = 63/93 (67%), Gaps = 5/93 (5%)
 Frame = -3

Query: 266 RKYGPDGTMALSLT-----XXXXXXXXXXXXXXXXXXXXXXXSLKKSRGRPPGSGKKQQM 102
           RKYGPDGTMAL+L+                            SLKK+RGRPPGS KKQQM
Sbjct: 93  RKYGPDGTMALALSPAPSGVNVSQSGGAFSSPPASAGSASPSSLKKARGRPPGSSKKQQM 152

Query: 101 AALGSAGIGFTPHIITVKAGEDVSSKIMSFSQN 3
            ALGSAG+GFTPH+ITVKAGEDVSSKIMSFSQ+
Sbjct: 153 EALGSAGVGFTPHVITVKAGEDVSSKIMSFSQH 185


>gb|ADE76494.1| unknown [Picea sitchensis]
          Length = 302

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 48/87 (55%), Positives = 60/87 (68%)
 Frame = -3

Query: 266 RKYGPDGTMALSLTXXXXXXXXXXXXXXXXXXXXXXXSLKKSRGRPPGSGKKQQMAALGS 87
           RKYGPDG+MAL+L+                         K+ RGRPPG+G+KQQ+AALGS
Sbjct: 44  RKYGPDGSMALALSPFSALPGMTGSSSQ-----------KRGRGRPPGTGRKQQLAALGS 92

Query: 86  AGIGFTPHIITVKAGEDVSSKIMSFSQ 6
           AG+GFTPH+IT+ AGEDV++KIMSFSQ
Sbjct: 93  AGVGFTPHVITIAAGEDVATKIMSFSQ 119


>gb|ADE76393.1| unknown [Picea sitchensis]
          Length = 302

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 51/92 (55%), Positives = 59/92 (64%), Gaps = 5/92 (5%)
 Frame = -3

Query: 266 RKYGPDGTMALSLTXXXXXXXXXXXXXXXXXXXXXXXSLKKSRGRPPGSGKKQQMAALG- 90
           RKYGPDG+MAL+L                          K+ RGRPPGSGKKQ++AALG 
Sbjct: 27  RKYGPDGSMALALAPLSASAPGAPFSPLQ----------KRGRGRPPGSGKKQRLAALGE 76

Query: 89  ----SAGIGFTPHIITVKAGEDVSSKIMSFSQ 6
               SAGIGFTPH+IT+ AGEDV+SKIMSFSQ
Sbjct: 77  WVVGSAGIGFTPHVITIAAGEDVASKIMSFSQ 108


Top