BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015355
         (1405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD09700.1| putative ribosomal large subunit pseudouridine s...   555   e-156
gb|EAZ43360.1| hypothetical protein OsJ_27960 [Oryza sativa Japo...   555   e-156
ref|NP_001062265.1| Os08g0520100 [Oryza sativa Japonica Group] g...   555   e-156
dbj|BAJ88492.1| predicted protein [Hordeum vulgare subsp. vulgare]    553   e-155
gb|AFW61502.1| hypothetical protein ZEAMMB73_778378 [Zea mays]        547   e-153

>dbj|BAD09700.1| putative ribosomal large subunit pseudouridine synthase C protein
            [Oryza sativa Japonica Group] gi|42409169|dbj|BAD10435.1|
            putative ribosomal large subunit pseudouridine synthase C
            protein [Oryza sativa Japonica Group]
          Length = 340

 Score =  555 bits (1431), Expect = e-156
 Identities = 258/323 (79%), Positives = 296/323 (91%)
 Frame = -2

Query: 1401 ISKRYDTIPTETLHPNADEIQYLQRLVMHKDSAIIVLNKPAKVPMKGNLPVHNSMDVLAA 1222
            I KRY+TIPT TLHPN DEI+YL+RLV+HKDSAI+VLNKP KVPMKGNLPVHNSMDVLAA
Sbjct: 18   IKKRYETIPTATLHPNKDEIEYLRRLVIHKDSAILVLNKPPKVPMKGNLPVHNSMDVLAA 77

Query: 1221 AALSYGNEEGPKLVHKLDRESSGLLLMGRSKESFSRLSWLFSNKGFAKTSSQTWNDACEA 1042
            AALSYGNEEGPKLVH+LDRESSGLLL GR+KESF+RL WLF++   AKT+SQ WN ACEA
Sbjct: 78   AALSYGNEEGPKLVHRLDRESSGLLLFGRTKESFTRLHWLFTSVNLAKTNSQVWNAACEA 137

Query: 1041 TVQRYWALVIGCPKEKQGIISAPLSKVLLNDGKAERIILAHPSGVNASQEALTEYRVLGP 862
             +QRYWALVIG PKE++GIISAPLSKVLL+DGKAER+ILAHPSG++ +QEA+T YRV+GP
Sbjct: 138  YMQRYWALVIGTPKEREGIISAPLSKVLLDDGKAERVILAHPSGIDGAQEAVTAYRVMGP 197

Query: 861  TINGCSWLELRPLTSRKHQVRVHCAEALGTPIVGDYKYGWFVHQRWKNMERVDYEPFSGK 682
            TI+GCSW+ELRPLT RKHQ+RVHCAEALGTPIVGDYKYGWFVHQRWK   + D+EPF+G+
Sbjct: 198  TIHGCSWIELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWFVHQRWKQNPQPDFEPFTGE 257

Query: 681  PYKLRRPEGLEVQKGSVLSKVPLLHLHCREMVIPNIAKFLDNSGKLHDEGQAWASHKPDL 502
            PYKLRRPEGLE+QKGSVLSKVPLLHLHCREMVIPNIAKFL ++G+ H+ G  W+  KP+L
Sbjct: 258  PYKLRRPEGLEIQKGSVLSKVPLLHLHCREMVIPNIAKFLSSNGEWHENGAPWSKEKPNL 317

Query: 501  LRFVAPMPSHMKISWNLMSSYLV 433
            LRF+APMP+HMKISWN+MSSYLV
Sbjct: 318  LRFIAPMPAHMKISWNIMSSYLV 340


>gb|EAZ43360.1| hypothetical protein OsJ_27960 [Oryza sativa Japonica Group]
          Length = 509

 Score =  555 bits (1431), Expect = e-156
 Identities = 258/323 (79%), Positives = 296/323 (91%)
 Frame = -2

Query: 1401 ISKRYDTIPTETLHPNADEIQYLQRLVMHKDSAIIVLNKPAKVPMKGNLPVHNSMDVLAA 1222
            I KRY+TIPT TLHPN DEI+YL+RLV+HKDSAI+VLNKP KVPMKGNLPVHNSMDVLAA
Sbjct: 187  IKKRYETIPTATLHPNKDEIEYLRRLVIHKDSAILVLNKPPKVPMKGNLPVHNSMDVLAA 246

Query: 1221 AALSYGNEEGPKLVHKLDRESSGLLLMGRSKESFSRLSWLFSNKGFAKTSSQTWNDACEA 1042
            AALSYGNEEGPKLVH+LDRESSGLLL GR+KESF+RL WLF++   AKT+SQ WN ACEA
Sbjct: 247  AALSYGNEEGPKLVHRLDRESSGLLLFGRTKESFTRLHWLFTSVNLAKTNSQVWNAACEA 306

Query: 1041 TVQRYWALVIGCPKEKQGIISAPLSKVLLNDGKAERIILAHPSGVNASQEALTEYRVLGP 862
             +QRYWALVIG PKE++GIISAPLSKVLL+DGKAER+ILAHPSG++ +QEA+T YRV+GP
Sbjct: 307  YMQRYWALVIGTPKEREGIISAPLSKVLLDDGKAERVILAHPSGIDGAQEAVTAYRVMGP 366

Query: 861  TINGCSWLELRPLTSRKHQVRVHCAEALGTPIVGDYKYGWFVHQRWKNMERVDYEPFSGK 682
            TI+GCSW+ELRPLT RKHQ+RVHCAEALGTPIVGDYKYGWFVHQRWK   + D+EPF+G+
Sbjct: 367  TIHGCSWIELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWFVHQRWKQNPQPDFEPFTGE 426

Query: 681  PYKLRRPEGLEVQKGSVLSKVPLLHLHCREMVIPNIAKFLDNSGKLHDEGQAWASHKPDL 502
            PYKLRRPEGLE+QKGSVLSKVPLLHLHCREMVIPNIAKFL ++G+ H+ G  W+  KP+L
Sbjct: 427  PYKLRRPEGLEIQKGSVLSKVPLLHLHCREMVIPNIAKFLSSNGEWHENGAPWSKEKPNL 486

Query: 501  LRFVAPMPSHMKISWNLMSSYLV 433
            LRF+APMP+HMKISWN+MSSYLV
Sbjct: 487  LRFIAPMPAHMKISWNIMSSYLV 509


>ref|NP_001062265.1| Os08g0520100 [Oryza sativa Japonica Group]
            gi|122234516|sp|Q0J4D4.1|PUS3_ORYSJ RecName: Full=RNA
            pseudourine synthase 3, mitochondrial; AltName: Full=RNA
            pseudouridylate synthase 3; AltName: Full=RNA-uridine
            isomerase 3; Flags: Precursor
            gi|113624234|dbj|BAF24179.1| Os08g0520100 [Oryza sativa
            Japonica Group] gi|125562210|gb|EAZ07658.1| hypothetical
            protein OsI_29911 [Oryza sativa Indica Group]
          Length = 475

 Score =  555 bits (1431), Expect = e-156
 Identities = 258/323 (79%), Positives = 296/323 (91%)
 Frame = -2

Query: 1401 ISKRYDTIPTETLHPNADEIQYLQRLVMHKDSAIIVLNKPAKVPMKGNLPVHNSMDVLAA 1222
            I KRY+TIPT TLHPN DEI+YL+RLV+HKDSAI+VLNKP KVPMKGNLPVHNSMDVLAA
Sbjct: 153  IKKRYETIPTATLHPNKDEIEYLRRLVIHKDSAILVLNKPPKVPMKGNLPVHNSMDVLAA 212

Query: 1221 AALSYGNEEGPKLVHKLDRESSGLLLMGRSKESFSRLSWLFSNKGFAKTSSQTWNDACEA 1042
            AALSYGNEEGPKLVH+LDRESSGLLL GR+KESF+RL WLF++   AKT+SQ WN ACEA
Sbjct: 213  AALSYGNEEGPKLVHRLDRESSGLLLFGRTKESFTRLHWLFTSVNLAKTNSQVWNAACEA 272

Query: 1041 TVQRYWALVIGCPKEKQGIISAPLSKVLLNDGKAERIILAHPSGVNASQEALTEYRVLGP 862
             +QRYWALVIG PKE++GIISAPLSKVLL+DGKAER+ILAHPSG++ +QEA+T YRV+GP
Sbjct: 273  YMQRYWALVIGTPKEREGIISAPLSKVLLDDGKAERVILAHPSGIDGAQEAVTAYRVMGP 332

Query: 861  TINGCSWLELRPLTSRKHQVRVHCAEALGTPIVGDYKYGWFVHQRWKNMERVDYEPFSGK 682
            TI+GCSW+ELRPLT RKHQ+RVHCAEALGTPIVGDYKYGWFVHQRWK   + D+EPF+G+
Sbjct: 333  TIHGCSWIELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWFVHQRWKQNPQPDFEPFTGE 392

Query: 681  PYKLRRPEGLEVQKGSVLSKVPLLHLHCREMVIPNIAKFLDNSGKLHDEGQAWASHKPDL 502
            PYKLRRPEGLE+QKGSVLSKVPLLHLHCREMVIPNIAKFL ++G+ H+ G  W+  KP+L
Sbjct: 393  PYKLRRPEGLEIQKGSVLSKVPLLHLHCREMVIPNIAKFLSSNGEWHENGAPWSKEKPNL 452

Query: 501  LRFVAPMPSHMKISWNLMSSYLV 433
            LRF+APMP+HMKISWN+MSSYLV
Sbjct: 453  LRFIAPMPAHMKISWNIMSSYLV 475


>dbj|BAJ88492.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 357

 Score =  553 bits (1424), Expect = e-155
 Identities = 255/323 (78%), Positives = 296/323 (91%)
 Frame = -2

Query: 1401 ISKRYDTIPTETLHPNADEIQYLQRLVMHKDSAIIVLNKPAKVPMKGNLPVHNSMDVLAA 1222
            I KRY+TIPT TLHPN DEI+YL+RLV++KDSAI+VLNKP KVPMKGNLPVHNSMDVLAA
Sbjct: 35   IKKRYETIPTATLHPNRDEIEYLKRLVIYKDSAILVLNKPPKVPMKGNLPVHNSMDVLAA 94

Query: 1221 AALSYGNEEGPKLVHKLDRESSGLLLMGRSKESFSRLSWLFSNKGFAKTSSQTWNDACEA 1042
            AALS+GNEEGPKLVH+LDR+SSGLLLMGR++E F+RL WLF++   AKT+SQTWN ACE+
Sbjct: 95   AALSFGNEEGPKLVHRLDRDSSGLLLMGRTREGFTRLHWLFTSIKLAKTASQTWNTACES 154

Query: 1041 TVQRYWALVIGCPKEKQGIISAPLSKVLLNDGKAERIILAHPSGVNASQEALTEYRVLGP 862
             +QRYWALVIG P E +G+ISAPL+KVLL+DGKAER+ILAHPSG++ +QEA+TEYRV+GP
Sbjct: 155  YLQRYWALVIGTPTESEGVISAPLTKVLLDDGKAERVILAHPSGIDGAQEAVTEYRVMGP 214

Query: 861  TINGCSWLELRPLTSRKHQVRVHCAEALGTPIVGDYKYGWFVHQRWKNMERVDYEPFSGK 682
            TINGCSW+ELRPLT RKHQ+RVHCAEALGTPIVGDYKYGWFVHQRWK   + D+EPF+G+
Sbjct: 215  TINGCSWIELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWFVHQRWKQNPQPDFEPFTGE 274

Query: 681  PYKLRRPEGLEVQKGSVLSKVPLLHLHCREMVIPNIAKFLDNSGKLHDEGQAWASHKPDL 502
            PYKLRRPEGLEVQKGSVLSKVPLLHLHCREMV+PNIAKFL N+G+ HD G  W+  KP+L
Sbjct: 275  PYKLRRPEGLEVQKGSVLSKVPLLHLHCREMVVPNIAKFLSNTGEWHDNGTPWSKEKPNL 334

Query: 501  LRFVAPMPSHMKISWNLMSSYLV 433
            LRF+APMP+HMKISWN+MSSYLV
Sbjct: 335  LRFIAPMPAHMKISWNIMSSYLV 357


>gb|AFW61502.1| hypothetical protein ZEAMMB73_778378 [Zea mays]
          Length = 478

 Score =  547 bits (1409), Expect = e-153
 Identities = 253/323 (78%), Positives = 294/323 (91%)
 Frame = -2

Query: 1401 ISKRYDTIPTETLHPNADEIQYLQRLVMHKDSAIIVLNKPAKVPMKGNLPVHNSMDVLAA 1222
            I KRY+TIPT TLHPN DEI+YL+RLV+++DSAI+VLNKP KVPMKG+LPVHNSMDVLAA
Sbjct: 156  IKKRYETIPTATLHPNKDEIEYLRRLVIYRDSAILVLNKPPKVPMKGHLPVHNSMDVLAA 215

Query: 1221 AALSYGNEEGPKLVHKLDRESSGLLLMGRSKESFSRLSWLFSNKGFAKTSSQTWNDACEA 1042
            AALSYG+EEGPKLVH+LDRESSGL+LMGR+KESF+RL WL ++   A+TSSQTWN ACEA
Sbjct: 216  AALSYGSEEGPKLVHRLDRESSGLILMGRTKESFTRLHWLLTSVNLARTSSQTWNKACEA 275

Query: 1041 TVQRYWALVIGCPKEKQGIISAPLSKVLLNDGKAERIILAHPSGVNASQEALTEYRVLGP 862
              Q+YWALVIG PKE++G+ISAP+SKVLL+DGKAER+ILAHPSG++ +QEA+TEYRV+GP
Sbjct: 276  YAQKYWALVIGTPKEREGVISAPISKVLLDDGKAERVILAHPSGIDGAQEAITEYRVMGP 335

Query: 861  TINGCSWLELRPLTSRKHQVRVHCAEALGTPIVGDYKYGWFVHQRWKNMERVDYEPFSGK 682
            TINGCSW+EL+PLT RKHQ+RVHCAEALGTPIVGDYKYGWFVHQ WK   + D+EPF+G+
Sbjct: 336  TINGCSWIELQPLTGRKHQLRVHCAEALGTPIVGDYKYGWFVHQTWKQNPQPDFEPFTGE 395

Query: 681  PYKLRRPEGLEVQKGSVLSKVPLLHLHCREMVIPNIAKFLDNSGKLHDEGQAWASHKPDL 502
            PYKLRRPEGLE+QKGSVLSKVPLLHLHCREMVIPNIAKFL ++G  H+ G  WA  KP+L
Sbjct: 396  PYKLRRPEGLEIQKGSVLSKVPLLHLHCREMVIPNIAKFLSSTGGWHENGTPWAKEKPNL 455

Query: 501  LRFVAPMPSHMKISWNLMSSYLV 433
            LRFVAPMP HMKISWN+MSSYLV
Sbjct: 456  LRFVAPMPPHMKISWNIMSSYLV 478