BLASTX nr result

ID: Dioscorea21_contig00015299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015299
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266347.1| PREDICTED: uncharacterized protein LOC100243...    60   1e-07
ref|XP_002511495.1| tRNA ligase, putative [Ricinus communis] gi|...    60   1e-07
emb|CAN79617.1| hypothetical protein VITISV_004978 [Vitis vinifera]    60   1e-07
gb|AAO72372.1| unknow protein [Oryza sativa Japonica Group]            59   4e-07
gb|ABF99406.1| aminoacyl-tRNA synthetase family, putative, expre...    59   4e-07

>ref|XP_002266347.1| PREDICTED: uncharacterized protein LOC100243405 [Vitis vinifera]
          Length = 718

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 37/73 (50%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
 Frame = -3

Query: 206 RPSPAAKKEREERRQN-----SRIVTXXXXXXXXXXXXXPRWELRSMWELAAILNFLHVF 42
           R  PA K+  EE  Q      S+IVT              RW LRSMWELA+ILNFLHVF
Sbjct: 74  RSKPAKKERNEESPQQQQQCASKIVTPLVNSPPPSQLP--RWTLRSMWELASILNFLHVF 131

Query: 41  RSLLHIELEISAE 3
           R LL+I +E SAE
Sbjct: 132 RPLLNIAVEFSAE 144


>ref|XP_002511495.1| tRNA ligase, putative [Ricinus communis]
           gi|223550610|gb|EEF52097.1| tRNA ligase, putative
           [Ricinus communis]
          Length = 721

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/61 (49%), Positives = 41/61 (67%)
 Frame = -3

Query: 185 KEREERRQNSRIVTXXXXXXXXXXXXXPRWELRSMWELAAILNFLHVFRSLLHIELEISA 6
           +++E+   NS+I+T              RW LRSMWELA++LNFLHVFR LL+I++E SA
Sbjct: 86  QQKEQCSANSKIITPLVGAPEPAQLP--RWSLRSMWELASVLNFLHVFRPLLNIQIEFSA 143

Query: 5   E 3
           E
Sbjct: 144 E 144


>emb|CAN79617.1| hypothetical protein VITISV_004978 [Vitis vinifera]
          Length = 757

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 37/73 (50%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
 Frame = -3

Query: 206 RPSPAAKKEREERRQN-----SRIVTXXXXXXXXXXXXXPRWELRSMWELAAILNFLHVF 42
           R  PA K+  EE  Q      S+IVT              RW LRSMWELA+ILNFLHVF
Sbjct: 74  RSKPAKKERNEESPQQQQQCASKIVTPLVNSPPPSQLP--RWTLRSMWELASILNFLHVF 131

Query: 41  RSLLHIELEISAE 3
           R LL+I +E SAE
Sbjct: 132 RPLLNIAVEFSAE 144


>gb|AAO72372.1| unknow protein [Oryza sativa Japonica Group]
          Length = 685

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/77 (44%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
 Frame = -3

Query: 215 PDPR------PSPAAKKEREERRQNSRIVTXXXXXXXXXXXXXPRWELRSMWELAAILNF 54
           P PR      P+ AA  E EE     R+VT              RW LR MWELA+++NF
Sbjct: 57  PPPRQERARPPAGAAAGEEEETTPKCRVVTPLVAEPEAPAELP-RWRLRGMWELASVINF 115

Query: 53  LHVFRSLLHIELEISAE 3
           LHVFR LL+I +E +AE
Sbjct: 116 LHVFRPLLNITVEFTAE 132


>gb|ABF99406.1| aminoacyl-tRNA synthetase family, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 446

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/77 (44%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
 Frame = -3

Query: 215 PDPR------PSPAAKKEREERRQNSRIVTXXXXXXXXXXXXXPRWELRSMWELAAILNF 54
           P PR      P+ AA  E EE     R+VT              RW LR MWELA+++NF
Sbjct: 57  PPPRQERARPPAGAAAGEEEETTPKCRVVTPLVAEPEAPAELP-RWRLRGMWELASVINF 115

Query: 53  LHVFRSLLHIELEISAE 3
           LHVFR LL+I +E +AE
Sbjct: 116 LHVFRPLLNITVEFTAE 132


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