BLASTX nr result

ID: Dioscorea21_contig00015258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00015258
         (1058 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266866.2| PREDICTED: uncharacterized protein LOC100261...   223   6e-56
ref|XP_002300277.1| hypothetical protein POPTRDRAFT_798081 [Popu...   223   8e-56
ref|XP_002525279.1| Histone H1.1, putative [Ricinus communis] gi...   216   8e-54
ref|XP_002532427.1| DNA binding protein, putative [Ricinus commu...   215   2e-53
emb|CCA29117.1| putative MYB transcription factor [Rosa hybrid c...   213   8e-53

>ref|XP_002266866.2| PREDICTED: uncharacterized protein LOC100261713 [Vitis vinifera]
           gi|296083034|emb|CBI22438.3| unnamed protein product
           [Vitis vinifera]
          Length = 300

 Score =  223 bits (568), Expect = 6e-56
 Identities = 125/240 (52%), Positives = 160/240 (66%), Gaps = 1/240 (0%)
 Frame = -2

Query: 754 MGAPKQKWTAEEESALKAGVIKYGTGKWRIILKDPEFSGTLCLRSNVDLKDKWRNLTVTA 575
           MGAPKQKWT EEE+ALKAGV+K+G GKWR ILKDPEFSG L LRSNVDLKDKWRN++V A
Sbjct: 1   MGAPKQKWTPEEEAALKAGVVKHGAGKWRTILKDPEFSGVLFLRSNVDLKDKWRNMSVMA 60

Query: 574 SGWGSRERARLALKKGKDVPKHDDNPLALXXXXXXXXXXXXDAKPLAISAENLHINRPQK 395
           +GWGSRE+ARLAL+K    PK ++NPL+L            D K LA+ +  + I   ++
Sbjct: 61  NGWGSREKARLALRKVPSAPKAEENPLSL-GTAVQSDDETVDTKALALPSNPVQITGSKR 119

Query: 394 ASLKLESLIFEAIMSLKEPSGSNKTDIAIYIEDRLVTPPEDXXXXXXXXXXXXXXXXXLI 215
           +  +L++LI EAI +LKEP GSNKT IA YIED+   PP +                 LI
Sbjct: 120 SFSRLDNLILEAITNLKEPGGSNKTTIATYIEDQYRAPP-NFKRLLSAKLKFFTTNGKLI 178

Query: 214 KVKRKYRAATGPSASEGRKSNGL-VSEGRPRDTSKLEKDGPKMLLKSEIDAELASMRNMT 38
           KVKRKYR A  P+ SE R+++ +   EGR   + K++KD   +L K+++D ELA MR MT
Sbjct: 179 KVKRKYRIAHTPAFSERRRNSSMPFLEGRQGFSPKVDKDDIHILTKAQVDFELAQMRGMT 238


>ref|XP_002300277.1| hypothetical protein POPTRDRAFT_798081 [Populus trichocarpa]
           gi|222847535|gb|EEE85082.1| hypothetical protein
           POPTRDRAFT_798081 [Populus trichocarpa]
          Length = 305

 Score =  223 bits (567), Expect = 8e-56
 Identities = 125/239 (52%), Positives = 159/239 (66%)
 Frame = -2

Query: 754 MGAPKQKWTAEEESALKAGVIKYGTGKWRIILKDPEFSGTLCLRSNVDLKDKWRNLTVTA 575
           MGAPKQKWTAEEE+ALKAGVIK+G GKWR ILKDPEFSG L LRSNVDLKDKWRN++V  
Sbjct: 1   MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILKDPEFSGVLYLRSNVDLKDKWRNISVMV 60

Query: 574 SGWGSRERARLALKKGKDVPKHDDNPLALXXXXXXXXXXXXDAKPLAISAENLHINRPQK 395
           +G+GSRE+ +LA K    V + D+NP+A+            DAKPLA+S+  L +  P++
Sbjct: 61  NGYGSREKPKLAPKMVHHVLRQDENPMAV----DQTDEDISDAKPLAVSSGALLVANPKR 116

Query: 394 ASLKLESLIFEAIMSLKEPSGSNKTDIAIYIEDRLVTPPEDXXXXXXXXXXXXXXXXXLI 215
            +++L++LI EAI SLKEP GS+KT IA YIE++   PP D                 LI
Sbjct: 117 TTVRLDNLIMEAITSLKEPGGSHKTAIASYIEEQ-YWPPNDFKRILSAKLKYLAANGKLI 175

Query: 214 KVKRKYRAATGPSASEGRKSNGLVSEGRPRDTSKLEKDGPKMLLKSEIDAELASMRNMT 38
           KVKRKYR A     +E R+ + L+ EGR R + K+E+DG  M   S+ID +L  MR MT
Sbjct: 176 KVKRKYRIAPTSVFAERRRVSPLLLEGRQRISPKIERDGFNMFTMSQIDLDLGRMRTMT 234


>ref|XP_002525279.1| Histone H1.1, putative [Ricinus communis]
           gi|223535437|gb|EEF37107.1| Histone H1.1, putative
           [Ricinus communis]
          Length = 303

 Score =  216 bits (550), Expect = 8e-54
 Identities = 123/240 (51%), Positives = 158/240 (65%), Gaps = 1/240 (0%)
 Frame = -2

Query: 754 MGAPKQKWTAEEESALKAGVIKYGTGKWRIILKDPEFSGTLCLRSNVDLKDKWRNLTVTA 575
           MGAPKQKWTAEEE+ALKAGV+K+GTGKWR IL DPEFS  L LRSNVDLKDKWRN+ VTA
Sbjct: 1   MGAPKQKWTAEEEAALKAGVLKHGTGKWRTILMDPEFSAILRLRSNVDLKDKWRNINVTA 60

Query: 574 SGWGSRERARLALKKGKDVPKHDDNPLALXXXXXXXXXXXXDAKPLAISAENLHINRPQK 395
             WGSR++A+LALKK    PK D+NP AL            DAKP+A+S         ++
Sbjct: 61  I-WGSRQKAKLALKKSPQTPKRDENPKAL-SSVVQGNEEIVDAKPIAVSNGTPKNVGSKE 118

Query: 394 ASLKLESLIFEAIMSLKEPSGSNKTDIAIYIEDRLVTPPEDXXXXXXXXXXXXXXXXXLI 215
              +L++LI EAI +L+EPSGS++  IA+YIE++   PP +                 LI
Sbjct: 119 LLARLDNLILEAITTLREPSGSDRPSIALYIEEKYWAPP-NLMKLLAGKLKLLTASGKLI 177

Query: 214 KVKRKYRAATGPSASEGRKSNGLVS-EGRPRDTSKLEKDGPKMLLKSEIDAELASMRNMT 38
           KVK KYR A   + SEGR+S+ LV  EG+ +D+ K EK   K+L KS++D EL+ ++ MT
Sbjct: 178 KVKHKYRIAPSSAVSEGRRSSPLVRIEGKQKDSPKSEKSNTKILTKSQVDQELSKIKGMT 237


>ref|XP_002532427.1| DNA binding protein, putative [Ricinus communis]
           gi|223527876|gb|EEF29968.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 341

 Score =  215 bits (547), Expect = 2e-53
 Identities = 122/240 (50%), Positives = 158/240 (65%), Gaps = 1/240 (0%)
 Frame = -2

Query: 754 MGAPKQKWTAEEESALKAGVIKYGTGKWRIILKDPEFSGTLCLRSNVDLKDKWRNLTVTA 575
           MGAPKQKWTAEEE+ALKAGVIK+G GKWR ILKDPEFS  L LRSNVDLKDKWRN++V A
Sbjct: 1   MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILKDPEFSSVLYLRSNVDLKDKWRNMSVMA 60

Query: 574 SGWGSRERARLALKKGKDVPKHDDNPLALXXXXXXXXXXXXDAKPLAISAENLHINRPQK 395
           +GW SRE+++LA+K+   V K ++N   +            DAK + ++   +    P++
Sbjct: 61  NGWSSREKSKLAVKRVHHVAKQEENNNPISLTVVQSDEDMSDAKSIVVANPAMQTGGPRR 120

Query: 394 ASLKLESLIFEAIMSLKEPSGSNKTDIAIYIEDRLVTPPEDXXXXXXXXXXXXXXXXXLI 215
           ++++L++LI EAI SLKE  GSNKT IA YIE++   PP D                 LI
Sbjct: 121 STVRLDNLIMEAITSLKESGGSNKTAIAAYIEEQ-YWPPHDFKRILSAKLKYLTSNGKLI 179

Query: 214 KVKRKYRAATGPSASEGRKS-NGLVSEGRPRDTSKLEKDGPKMLLKSEIDAELASMRNMT 38
           KVKRKYR A  P+ S+ R++ + L  EGR R + K+E+D   ML KS+ID ELA MR MT
Sbjct: 180 KVKRKYRIA--PTFSDRRRNPSMLFLEGRHRISPKVERDDFNMLTKSQIDVELAKMRTMT 237


>emb|CCA29117.1| putative MYB transcription factor [Rosa hybrid cultivar]
          Length = 303

 Score =  213 bits (541), Expect = 8e-53
 Identities = 118/244 (48%), Positives = 159/244 (65%), Gaps = 5/244 (2%)
 Frame = -2

Query: 754 MGAPKQKWTAEEESALKAGVIKYGTGKWRIILKDPEFSGTLCLRSNVDLKDKWRNLTVTA 575
           MGAPKQKW AEEE+ALKAGV+K+G GKWR ILKDPEF+  L LRSNVDLKDKWRNL+V  
Sbjct: 1   MGAPKQKWNAEEEAALKAGVVKHGAGKWRTILKDPEFARILYLRSNVDLKDKWRNLSVMV 60

Query: 574 SGWGSRERARLALKKGKDVPKHDDNPLALXXXXXXXXXXXXDAKPLAISAENLHINRPQK 395
           +GWGSR++ +   ++   VPK +D+ +AL            DAKP+  S+++  ++ P++
Sbjct: 61  NGWGSRDKCKTVTRRMPQVPKQEDSSMAL--SAGQSDEEVMDAKPMTASSDSQQVSAPKR 118

Query: 394 ASL----KLESLIFEAIMSLKEPSGSNKTDIAIYIEDRLVTPPEDXXXXXXXXXXXXXXX 227
           + +    +L+ LI EAI SLK+P GSNKT IA YIE++   PP D               
Sbjct: 119 SIVSHDRRLDDLIMEAITSLKDPGGSNKTTIATYIEEQYWAPP-DFKRLLSAKLKFLTAS 177

Query: 226 XXLIKVKRKYRAATGPSASEGRKSNGL-VSEGRPRDTSKLEKDGPKMLLKSEIDAELASM 50
             LIKVKR+YR A  P+  E R+++ + + EGR R + K +KD   ML+K++ID ELA M
Sbjct: 178 RKLIKVKRRYRIAPTPTFLEKRRNSPMFLFEGRQRASPKFDKDDGTMLMKTQIDLELAKM 237

Query: 49  RNMT 38
           R MT
Sbjct: 238 RTMT 241


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