BLASTX nr result

ID: Dioscorea21_contig00014114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00014114
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE60736.1| hypothetical protein OsJ_14260 [Oryza sativa Japo...   251   4e-65
ref|NP_001052463.1| Os04g0321600 [Oryza sativa Japonica Group] g...   251   4e-65
gb|EAZ42674.1| hypothetical protein OsJ_27240 [Oryza sativa Japo...   249   2e-64
ref|XP_002445810.1| hypothetical protein SORBIDRAFT_07g026150 [S...   248   3e-64
ref|XP_002466155.1| hypothetical protein SORBIDRAFT_01g002390 [S...   248   4e-64

>gb|EEE60736.1| hypothetical protein OsJ_14260 [Oryza sativa Japonica Group]
          Length = 1056

 Score =  251 bits (641), Expect = 4e-65
 Identities = 122/136 (89%), Positives = 130/136 (95%)
 Frame = +1

Query: 1    KYQGAIYLKEITFRSKDPRHSSEVVQQIKTLRRQVTSRESERAERATLVTQEKLQLANNR 180
            K QGAIYLKEITFRSKDPRHSSEVVQQIKTLRRQV SRESERAERATLVTQEKLQL +NR
Sbjct: 600  KSQGAIYLKEITFRSKDPRHSSEVVQQIKTLRRQVASRESERAERATLVTQEKLQLTSNR 659

Query: 181  MRPMRLPDLWIRPAFGGRGRKLTGTLEAHVNGFRYSTSRPDERVEIMYGNIKHAFFQPAE 360
             +P+RL D+WIRPAFGGRGRKLTGTLE+HVNGFRYSTSR DERV+IMYGN+KHAFFQPAE
Sbjct: 660  NKPVRLSDVWIRPAFGGRGRKLTGTLESHVNGFRYSTSRADERVDIMYGNVKHAFFQPAE 719

Query: 361  REMITLLHFHLHNHIM 408
            +EMITLLHFHLHNHIM
Sbjct: 720  KEMITLLHFHLHNHIM 735


>ref|NP_001052463.1| Os04g0321600 [Oryza sativa Japonica Group]
            gi|75295962|sp|Q7X923.2|SPT16_ORYSJ RecName: Full=FACT
            complex subunit SPT16; AltName: Full=Facilitates
            chromatin transcription complex subunit SPT16
            gi|38346977|emb|CAD40293.2| OSJNBb0062H02.2 [Oryza sativa
            Japonica Group] gi|113564034|dbj|BAF14377.1| Os04g0321600
            [Oryza sativa Japonica Group]
            gi|215768327|dbj|BAH00556.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 1056

 Score =  251 bits (641), Expect = 4e-65
 Identities = 122/136 (89%), Positives = 130/136 (95%)
 Frame = +1

Query: 1    KYQGAIYLKEITFRSKDPRHSSEVVQQIKTLRRQVTSRESERAERATLVTQEKLQLANNR 180
            K QGAIYLKEITFRSKDPRHSSEVVQQIKTLRRQV SRESERAERATLVTQEKLQL +NR
Sbjct: 600  KSQGAIYLKEITFRSKDPRHSSEVVQQIKTLRRQVASRESERAERATLVTQEKLQLTSNR 659

Query: 181  MRPMRLPDLWIRPAFGGRGRKLTGTLEAHVNGFRYSTSRPDERVEIMYGNIKHAFFQPAE 360
             +P+RL D+WIRPAFGGRGRKLTGTLE+HVNGFRYSTSR DERV+IMYGN+KHAFFQPAE
Sbjct: 660  NKPVRLSDVWIRPAFGGRGRKLTGTLESHVNGFRYSTSRADERVDIMYGNVKHAFFQPAE 719

Query: 361  REMITLLHFHLHNHIM 408
            +EMITLLHFHLHNHIM
Sbjct: 720  KEMITLLHFHLHNHIM 735


>gb|EAZ42674.1| hypothetical protein OsJ_27240 [Oryza sativa Japonica Group]
          Length = 623

 Score =  249 bits (635), Expect = 2e-64
 Identities = 121/136 (88%), Positives = 130/136 (95%)
 Frame = +1

Query: 1   KYQGAIYLKEITFRSKDPRHSSEVVQQIKTLRRQVTSRESERAERATLVTQEKLQLANNR 180
           K QGAIYLKEITFRSKDPRHSSEVV QIKTLRRQV SRESERAERATLVTQEKLQLA+NR
Sbjct: 120 KSQGAIYLKEITFRSKDPRHSSEVVPQIKTLRRQVASRESERAERATLVTQEKLQLASNR 179

Query: 181 MRPMRLPDLWIRPAFGGRGRKLTGTLEAHVNGFRYSTSRPDERVEIMYGNIKHAFFQPAE 360
            +P+RL D+WIRPAFGGRGRKLTGTLE+HVNGFRYSTSR DERV+IMYGN+KHAFFQPAE
Sbjct: 180 NKPVRLSDVWIRPAFGGRGRKLTGTLESHVNGFRYSTSRADERVDIMYGNVKHAFFQPAE 239

Query: 361 REMITLLHFHLHNHIM 408
           +E+ITLLHFHLHNHIM
Sbjct: 240 KEIITLLHFHLHNHIM 255


>ref|XP_002445810.1| hypothetical protein SORBIDRAFT_07g026150 [Sorghum bicolor]
            gi|241942160|gb|EES15305.1| hypothetical protein
            SORBIDRAFT_07g026150 [Sorghum bicolor]
          Length = 1028

 Score =  248 bits (634), Expect = 3e-64
 Identities = 121/134 (90%), Positives = 127/134 (94%)
 Frame = +1

Query: 7    QGAIYLKEITFRSKDPRHSSEVVQQIKTLRRQVTSRESERAERATLVTQEKLQLANNRMR 186
            QGAIYLKEITFRSKDPRHSSEVVQQIKTLRRQV SRESERAERATLVTQEKLQ+ NNRM+
Sbjct: 600  QGAIYLKEITFRSKDPRHSSEVVQQIKTLRRQVASRESERAERATLVTQEKLQIGNNRMK 659

Query: 187  PMRLPDLWIRPAFGGRGRKLTGTLEAHVNGFRYSTSRPDERVEIMYGNIKHAFFQPAERE 366
             M+L D+WIRPAFGGRGRKLTG LEAH NGFRYSTSR DERV+IMYGNIKHAFFQPAE+E
Sbjct: 660  MMKLSDVWIRPAFGGRGRKLTGNLEAHFNGFRYSTSRSDERVDIMYGNIKHAFFQPAEKE 719

Query: 367  MITLLHFHLHNHIM 408
            MITLLHFHLHNHIM
Sbjct: 720  MITLLHFHLHNHIM 733


>ref|XP_002466155.1| hypothetical protein SORBIDRAFT_01g002390 [Sorghum bicolor]
            gi|241920009|gb|EER93153.1| hypothetical protein
            SORBIDRAFT_01g002390 [Sorghum bicolor]
          Length = 1054

 Score =  248 bits (633), Expect = 4e-64
 Identities = 121/134 (90%), Positives = 127/134 (94%)
 Frame = +1

Query: 7    QGAIYLKEITFRSKDPRHSSEVVQQIKTLRRQVTSRESERAERATLVTQEKLQLANNRMR 186
            QGAIYLKEITFRSKDPRHSSEVVQQIKTLRRQV SRESERAERATLVTQEKLQ+ NNRM+
Sbjct: 601  QGAIYLKEITFRSKDPRHSSEVVQQIKTLRRQVASRESERAERATLVTQEKLQIGNNRMK 660

Query: 187  PMRLPDLWIRPAFGGRGRKLTGTLEAHVNGFRYSTSRPDERVEIMYGNIKHAFFQPAERE 366
             MRL D+WIRPAFGGRGRKLTG LEAH NGFRYSTSR DERV+IM+GNIKHAFFQPAE+E
Sbjct: 661  MMRLSDVWIRPAFGGRGRKLTGNLEAHFNGFRYSTSRSDERVDIMFGNIKHAFFQPAEKE 720

Query: 367  MITLLHFHLHNHIM 408
            MITLLHFHLHNHIM
Sbjct: 721  MITLLHFHLHNHIM 734


Top