BLASTX nr result
ID: Dioscorea21_contig00013920
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00013920 (347 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001145306.1| uncharacterized protein LOC100278612 [Zea ma... 64 2e-08 ref|XP_002301002.1| predicted protein [Populus trichocarpa] gi|1... 62 6e-08 ref|XP_002513776.1| conserved hypothetical protein [Ricinus comm... 61 8e-08 gb|EEC74911.1| hypothetical protein OsI_10850 [Oryza sativa Indi... 61 1e-07 ref|NP_001049636.1| Os03g0263700 [Oryza sativa Japonica Group] g... 61 1e-07 >ref|NP_001145306.1| uncharacterized protein LOC100278612 [Zea mays] gi|195654385|gb|ACG46660.1| hypothetical protein [Zea mays] Length = 92 Score = 63.5 bits (153), Expect = 2e-08 Identities = 32/72 (44%), Positives = 42/72 (58%) Frame = -3 Query: 342 IGVFFITMFSLDKSDEYKKGTGATKRYXXXXXXXXXXXXXXXXXXXXXXXRFMSDMRSND 163 I +FF T+FS+DK+D YKKG GA K++ +SD++SND Sbjct: 32 IRIFFDTLFSVDKTDSYKKGYGAGKKWDGGPGGGGGRGPRT-----------LSDIQSND 80 Query: 162 HNSLPACGSCCG 127 H+SLPACGSCCG Sbjct: 81 HSSLPACGSCCG 92 >ref|XP_002301002.1| predicted protein [Populus trichocarpa] gi|118481555|gb|ABK92720.1| unknown [Populus trichocarpa] gi|222842728|gb|EEE80275.1| predicted protein [Populus trichocarpa] Length = 100 Score = 61.6 bits (148), Expect = 6e-08 Identities = 30/73 (41%), Positives = 43/73 (58%) Frame = -3 Query: 345 LIGVFFITMFSLDKSDEYKKGTGATKRYXXXXXXXXXXXXXXXXXXXXXXXRFMSDMRSN 166 LIGVFF TMFS++K+D Y+KG+G++K++ + ++R Sbjct: 31 LIGVFFSTMFSMEKTDAYRKGSGSSKKWDGGPGGPGSGPYGGGPRGPPRG---LDNVRGI 87 Query: 165 DHNSLPACGSCCG 127 DH+SLPACGSCCG Sbjct: 88 DHSSLPACGSCCG 100 >ref|XP_002513776.1| conserved hypothetical protein [Ricinus communis] gi|223546862|gb|EEF48359.1| conserved hypothetical protein [Ricinus communis] Length = 100 Score = 61.2 bits (147), Expect = 8e-08 Identities = 30/72 (41%), Positives = 42/72 (58%) Frame = -3 Query: 342 IGVFFITMFSLDKSDEYKKGTGATKRYXXXXXXXXXXXXXXXXXXXXXXXRFMSDMRSND 163 IGVFF TMFS++KSD Y+KG+G++K++ + ++R D Sbjct: 32 IGVFFSTMFSMEKSDAYRKGSGSSKKWDGGPGGPGSGPYGGGPRGPPRG---LDNVRGID 88 Query: 162 HNSLPACGSCCG 127 H+SLPACGSCCG Sbjct: 89 HSSLPACGSCCG 100 >gb|EEC74911.1| hypothetical protein OsI_10850 [Oryza sativa Indica Group] Length = 107 Score = 60.8 bits (146), Expect = 1e-07 Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%) Frame = -3 Query: 342 IGVFFITMFSLDKSDEYKKGTGATKRYXXXXXXXXXXXXXXXXXXXXXXXR----FMSDM 175 I +FF+TMFS++K+D Y+KG G+ K++ +SD+ Sbjct: 32 IRMFFLTMFSIEKTDSYRKGYGSGKKWDGGPGGGGPGGGPYGGGRGGGGGPRGPRTLSDI 91 Query: 174 RSNDHNSLPACGSCCG 127 RSND NSLPACGSCCG Sbjct: 92 RSNDQNSLPACGSCCG 107 >ref|NP_001049636.1| Os03g0263700 [Oryza sativa Japonica Group] gi|108707318|gb|ABF95113.1| expressed protein [Oryza sativa Japonica Group] gi|108707319|gb|ABF95114.1| expressed protein [Oryza sativa Japonica Group] gi|113548107|dbj|BAF11550.1| Os03g0263700 [Oryza sativa Japonica Group] gi|215701246|dbj|BAG92670.1| unnamed protein product [Oryza sativa Japonica Group] Length = 107 Score = 60.8 bits (146), Expect = 1e-07 Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%) Frame = -3 Query: 342 IGVFFITMFSLDKSDEYKKGTGATKRYXXXXXXXXXXXXXXXXXXXXXXXR----FMSDM 175 I +FF+TMFS++K+D Y+KG G+ K++ +SD+ Sbjct: 32 IRMFFLTMFSIEKTDSYRKGYGSGKKWDGGPGGGGPGGGPYGGGRGGGGGLRGPRTLSDI 91 Query: 174 RSNDHNSLPACGSCCG 127 RSND NSLPACGSCCG Sbjct: 92 RSNDQNSLPACGSCCG 107