BLASTX nr result

ID: Dioscorea21_contig00013920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013920
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001145306.1| uncharacterized protein LOC100278612 [Zea ma...    64   2e-08
ref|XP_002301002.1| predicted protein [Populus trichocarpa] gi|1...    62   6e-08
ref|XP_002513776.1| conserved hypothetical protein [Ricinus comm...    61   8e-08
gb|EEC74911.1| hypothetical protein OsI_10850 [Oryza sativa Indi...    61   1e-07
ref|NP_001049636.1| Os03g0263700 [Oryza sativa Japonica Group] g...    61   1e-07

>ref|NP_001145306.1| uncharacterized protein LOC100278612 [Zea mays]
           gi|195654385|gb|ACG46660.1| hypothetical protein [Zea
           mays]
          Length = 92

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/72 (44%), Positives = 42/72 (58%)
 Frame = -3

Query: 342 IGVFFITMFSLDKSDEYKKGTGATKRYXXXXXXXXXXXXXXXXXXXXXXXRFMSDMRSND 163
           I +FF T+FS+DK+D YKKG GA K++                         +SD++SND
Sbjct: 32  IRIFFDTLFSVDKTDSYKKGYGAGKKWDGGPGGGGGRGPRT-----------LSDIQSND 80

Query: 162 HNSLPACGSCCG 127
           H+SLPACGSCCG
Sbjct: 81  HSSLPACGSCCG 92


>ref|XP_002301002.1| predicted protein [Populus trichocarpa] gi|118481555|gb|ABK92720.1|
           unknown [Populus trichocarpa]
           gi|222842728|gb|EEE80275.1| predicted protein [Populus
           trichocarpa]
          Length = 100

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/73 (41%), Positives = 43/73 (58%)
 Frame = -3

Query: 345 LIGVFFITMFSLDKSDEYKKGTGATKRYXXXXXXXXXXXXXXXXXXXXXXXRFMSDMRSN 166
           LIGVFF TMFS++K+D Y+KG+G++K++                         + ++R  
Sbjct: 31  LIGVFFSTMFSMEKTDAYRKGSGSSKKWDGGPGGPGSGPYGGGPRGPPRG---LDNVRGI 87

Query: 165 DHNSLPACGSCCG 127
           DH+SLPACGSCCG
Sbjct: 88  DHSSLPACGSCCG 100


>ref|XP_002513776.1| conserved hypothetical protein [Ricinus communis]
           gi|223546862|gb|EEF48359.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 100

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/72 (41%), Positives = 42/72 (58%)
 Frame = -3

Query: 342 IGVFFITMFSLDKSDEYKKGTGATKRYXXXXXXXXXXXXXXXXXXXXXXXRFMSDMRSND 163
           IGVFF TMFS++KSD Y+KG+G++K++                         + ++R  D
Sbjct: 32  IGVFFSTMFSMEKSDAYRKGSGSSKKWDGGPGGPGSGPYGGGPRGPPRG---LDNVRGID 88

Query: 162 HNSLPACGSCCG 127
           H+SLPACGSCCG
Sbjct: 89  HSSLPACGSCCG 100


>gb|EEC74911.1| hypothetical protein OsI_10850 [Oryza sativa Indica Group]
          Length = 107

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
 Frame = -3

Query: 342 IGVFFITMFSLDKSDEYKKGTGATKRYXXXXXXXXXXXXXXXXXXXXXXXR----FMSDM 175
           I +FF+TMFS++K+D Y+KG G+ K++                             +SD+
Sbjct: 32  IRMFFLTMFSIEKTDSYRKGYGSGKKWDGGPGGGGPGGGPYGGGRGGGGGPRGPRTLSDI 91

Query: 174 RSNDHNSLPACGSCCG 127
           RSND NSLPACGSCCG
Sbjct: 92  RSNDQNSLPACGSCCG 107


>ref|NP_001049636.1| Os03g0263700 [Oryza sativa Japonica Group]
           gi|108707318|gb|ABF95113.1| expressed protein [Oryza
           sativa Japonica Group] gi|108707319|gb|ABF95114.1|
           expressed protein [Oryza sativa Japonica Group]
           gi|113548107|dbj|BAF11550.1| Os03g0263700 [Oryza sativa
           Japonica Group] gi|215701246|dbj|BAG92670.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 107

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
 Frame = -3

Query: 342 IGVFFITMFSLDKSDEYKKGTGATKRYXXXXXXXXXXXXXXXXXXXXXXXR----FMSDM 175
           I +FF+TMFS++K+D Y+KG G+ K++                             +SD+
Sbjct: 32  IRMFFLTMFSIEKTDSYRKGYGSGKKWDGGPGGGGPGGGPYGGGRGGGGGLRGPRTLSDI 91

Query: 174 RSNDHNSLPACGSCCG 127
           RSND NSLPACGSCCG
Sbjct: 92  RSNDQNSLPACGSCCG 107


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