BLASTX nr result

ID: Dioscorea21_contig00013799 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013799
         (869 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC70323.1| hypothetical protein OsI_01192 [Oryza sativa Indi...   429   e-118
ref|NP_001042599.1| Os01g0251100 [Oryza sativa Japonica Group] g...   429   e-118
ref|XP_002268657.1| PREDICTED: 50S ribosomal protein L3-2, chlor...   428   e-118
ref|XP_003566368.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma...   427   e-117
dbj|BAJ90112.1| predicted protein [Hordeum vulgare subsp. vulgare]    422   e-116

>gb|EEC70323.1| hypothetical protein OsI_01192 [Oryza sativa Indica Group]
          Length = 319

 Score =  429 bits (1103), Expect = e-118
 Identities = 212/296 (71%), Positives = 242/296 (81%), Gaps = 10/296 (3%)
 Frame = -3

Query: 864 RWFSAEPLLAGGDDEV----------EGSFGGRIIEAKPRVMRPDSKRTGAIGIKCGMTA 715
           R FSAEPL++  DD+           EGS GGRIIEA+  VM PDS+RTG IG+KCGM+A
Sbjct: 27  RPFSAEPLVSHPDDDDAAAGVGGGGGEGSGGGRIIEARAGVMGPDSRRTGVIGVKCGMSA 86

Query: 714 LWDKWGARIPITVLWVDDNVVCQVKTPDKDCTTALQIGAGQKKEKHLRKPEVGHYRAQGV 535
           +WDKWGA++PITVLWVDDNVVCQVKT +K+   ALQ+GAGQKKEKHL KPEVGH+RAQGV
Sbjct: 87  MWDKWGAKVPITVLWVDDNVVCQVKTAEKEGFFALQLGAGQKKEKHLTKPEVGHFRAQGV 146

Query: 534 PLKRKLREFPVTEDALLPVGTPITVRHFIPGQYVDVTGITMGKGFQGGMKRWGFSGMPAS 355
           PLKRKLREFPVTEDAL+P+GT ITVRHF+PGQ+VDVTGIT GKGF GGMKR GFSGMPAS
Sbjct: 147 PLKRKLREFPVTEDALIPLGTTITVRHFVPGQFVDVTGITKGKGFAGGMKRHGFSGMPAS 206

Query: 354 HGASLSHRSIGSTGQRDAPGRVFXXXXXXXXXXXKQCTVKNVWVYKIEPGRNLMWVKGQV 175
           HGASLSHRSIGSTGQRDAPGRVF            Q TVKNVWVY+I+P RNL+++KGQV
Sbjct: 207 HGASLSHRSIGSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQIDPARNLLYLKGQV 266

Query: 174 PGAEGNFVFIKDAVYAKPDSSKLPFPTHFIPEGEETSELEPLVADLGDIDPFMVTD 7
           PG +G+FVF+KD++Y KPD +KLPFPT+F  EGE     E LVADLGDIDPFMV D
Sbjct: 267 PGPQGSFVFVKDSIYKKPDIAKLPFPTYFSQEGESE---ELLVADLGDIDPFMVAD 319


>ref|NP_001042599.1| Os01g0251100 [Oryza sativa Japonica Group]
           gi|7106521|dbj|BAA92206.1| putative ribosomal protein L3
           [Oryza sativa Japonica Group]
           gi|113532130|dbj|BAF04513.1| Os01g0251100 [Oryza sativa
           Japonica Group] gi|215678787|dbj|BAG95224.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215707174|dbj|BAG93634.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222618109|gb|EEE54241.1| hypothetical protein
           OsJ_01115 [Oryza sativa Japonica Group]
          Length = 319

 Score =  429 bits (1103), Expect = e-118
 Identities = 212/296 (71%), Positives = 242/296 (81%), Gaps = 10/296 (3%)
 Frame = -3

Query: 864 RWFSAEPLLAGGDDEV----------EGSFGGRIIEAKPRVMRPDSKRTGAIGIKCGMTA 715
           R FSAEPL++  DD+           EGS GGRIIEA+  VM PDS+RTG IG+KCGM+A
Sbjct: 27  RPFSAEPLVSHPDDDDAAAGGGGGGGEGSGGGRIIEARAGVMGPDSRRTGVIGVKCGMSA 86

Query: 714 LWDKWGARIPITVLWVDDNVVCQVKTPDKDCTTALQIGAGQKKEKHLRKPEVGHYRAQGV 535
           +WDKWGA++PITVLWVDDNVVCQVKT +K+   ALQ+GAGQKKEKHL KPEVGH+RAQGV
Sbjct: 87  MWDKWGAKVPITVLWVDDNVVCQVKTAEKEGFFALQLGAGQKKEKHLTKPEVGHFRAQGV 146

Query: 534 PLKRKLREFPVTEDALLPVGTPITVRHFIPGQYVDVTGITMGKGFQGGMKRWGFSGMPAS 355
           PLKRKLREFPVTEDAL+P+GT ITVRHF+PGQ+VDVTGIT GKGF GGMKR GFSGMPAS
Sbjct: 147 PLKRKLREFPVTEDALIPLGTTITVRHFVPGQFVDVTGITKGKGFAGGMKRHGFSGMPAS 206

Query: 354 HGASLSHRSIGSTGQRDAPGRVFXXXXXXXXXXXKQCTVKNVWVYKIEPGRNLMWVKGQV 175
           HGASLSHRSIGSTGQRDAPGRVF            Q TVKNVWVY+I+P RNL+++KGQV
Sbjct: 207 HGASLSHRSIGSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQIDPARNLLYLKGQV 266

Query: 174 PGAEGNFVFIKDAVYAKPDSSKLPFPTHFIPEGEETSELEPLVADLGDIDPFMVTD 7
           PG +G+FVF+KD++Y KPD +KLPFPT+F  EGE     E LVADLGDIDPFMV D
Sbjct: 267 PGPQGSFVFVKDSIYKKPDIAKLPFPTYFSQEGESE---ELLVADLGDIDPFMVAD 319


>ref|XP_002268657.1| PREDICTED: 50S ribosomal protein L3-2, chloroplastic [Vitis
           vinifera] gi|297736812|emb|CBI26013.3| unnamed protein
           product [Vitis vinifera]
          Length = 307

 Score =  428 bits (1101), Expect = e-118
 Identities = 207/264 (78%), Positives = 226/264 (85%)
 Frame = -3

Query: 798 RIIEAKPRVMRPDSKRTGAIGIKCGMTALWDKWGARIPITVLWVDDNVVCQVKTPDKDCT 619
           RII  KP VM P+SKRTGAI +KCGM+ALWDKWGAR+PITVLW+DDN+V QVKT +K+  
Sbjct: 44  RIIVPKPGVMSPNSKRTGAIAVKCGMSALWDKWGARVPITVLWLDDNIVSQVKTFEKEGL 103

Query: 618 TALQIGAGQKKEKHLRKPEVGHYRAQGVPLKRKLREFPVTEDALLPVGTPITVRHFIPGQ 439
            ALQ+G GQKK KHL KPEVGH+RAQGVPLKRKLREFPVTEDALLPVGT I VRHF+PGQ
Sbjct: 104 NALQVGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTTIGVRHFVPGQ 163

Query: 438 YVDVTGITMGKGFQGGMKRWGFSGMPASHGASLSHRSIGSTGQRDAPGRVFXXXXXXXXX 259
           YVDVTGIT GKGFQGGMKRWGF GMPASHGASLSHRSIGSTGQRDAPG+VF         
Sbjct: 164 YVDVTGITRGKGFQGGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRM 223

Query: 258 XXKQCTVKNVWVYKIEPGRNLMWVKGQVPGAEGNFVFIKDAVYAKPDSSKLPFPTHFIPE 79
             KQ TVKNVWVYKI+P RNLMWV+GQVPGAEGNFVFIKDAVY KPD+S LPFPT+F  E
Sbjct: 224 GGKQRTVKNVWVYKIDPTRNLMWVRGQVPGAEGNFVFIKDAVYKKPDASILPFPTYFPAE 283

Query: 78  GEETSELEPLVADLGDIDPFMVTD 7
            E+ + LEP+VADLGDIDPFMV D
Sbjct: 284 DEDPTVLEPIVADLGDIDPFMVAD 307


>ref|XP_003566368.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L3-2,
           chloroplastic-like [Brachypodium distachyon]
          Length = 310

 Score =  427 bits (1099), Expect = e-117
 Identities = 205/286 (71%), Positives = 238/286 (83%)
 Frame = -3

Query: 864 RWFSAEPLLAGGDDEVEGSFGGRIIEAKPRVMRPDSKRTGAIGIKCGMTALWDKWGARIP 685
           R FSAEPL++  D++  G  GGRIIEA+  +M PD +RTG IG+KCGM+A+WDKWGA++P
Sbjct: 26  RLFSAEPLVSHPDEDGAGEGGGRIIEARSGIMGPDFRRTGVIGVKCGMSAMWDKWGAKVP 85

Query: 684 ITVLWVDDNVVCQVKTPDKDCTTALQIGAGQKKEKHLRKPEVGHYRAQGVPLKRKLREFP 505
           ITVLWVDDNVVCQVKT +K+   ALQ+GAGQKKEKHL KPEVGH+R+QGVPLKRKL+EFP
Sbjct: 86  ITVLWVDDNVVCQVKTAEKEGFFALQLGAGQKKEKHLTKPEVGHFRSQGVPLKRKLKEFP 145

Query: 504 VTEDALLPVGTPITVRHFIPGQYVDVTGITMGKGFQGGMKRWGFSGMPASHGASLSHRSI 325
           VTEDALLPVGT IT RHF+PGQ+VDV GIT GKGF GGMKR GFSGMPASHGASLSHRSI
Sbjct: 146 VTEDALLPVGTTITARHFVPGQFVDVIGITKGKGFAGGMKRHGFSGMPASHGASLSHRSI 205

Query: 324 GSTGQRDAPGRVFXXXXXXXXXXXKQCTVKNVWVYKIEPGRNLMWVKGQVPGAEGNFVFI 145
           GSTGQRDAPGRVF            Q TVKNVWVY+I+P RNL+++KGQVPG +G+F+FI
Sbjct: 206 GSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQIDPARNLLYLKGQVPGPQGSFLFI 265

Query: 144 KDAVYAKPDSSKLPFPTHFIPEGEETSELEPLVADLGDIDPFMVTD 7
           KD++Y KPD + LPFPT+F  EG E  +LEPLVADLGDIDPFM  D
Sbjct: 266 KDSIYKKPDRTLLPFPTYFPQEG-EPEDLEPLVADLGDIDPFMAAD 310


>dbj|BAJ90112.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 313

 Score =  422 bits (1086), Expect = e-116
 Identities = 201/289 (69%), Positives = 240/289 (83%), Gaps = 3/289 (1%)
 Frame = -3

Query: 864 RWFSAEPLLAGGDDE---VEGSFGGRIIEAKPRVMRPDSKRTGAIGIKCGMTALWDKWGA 694
           R FSAEPL++  DD+     G  GGRIIE +P VM P+S+RTG IG+KCGM+A+WDKWGA
Sbjct: 26  RLFSAEPLVSHPDDDDAGAGGEGGGRIIETRPGVMGPESRRTGVIGVKCGMSAMWDKWGA 85

Query: 693 RIPITVLWVDDNVVCQVKTPDKDCTTALQIGAGQKKEKHLRKPEVGHYRAQGVPLKRKLR 514
           ++PITVLWVDDNVVCQVKT +K+   ALQ+GAGQKKEKHL KPEVGH+R+QGVPLKRKL+
Sbjct: 86  KVPITVLWVDDNVVCQVKTAEKEGFYALQLGAGQKKEKHLTKPEVGHFRSQGVPLKRKLK 145

Query: 513 EFPVTEDALLPVGTPITVRHFIPGQYVDVTGITMGKGFQGGMKRWGFSGMPASHGASLSH 334
           EFPVTEDALLPVGT I+VRHF+PGQ+VDV GIT GKGF GGMKR GFSGMPASHGASLSH
Sbjct: 146 EFPVTEDALLPVGTTISVRHFVPGQFVDVIGITKGKGFAGGMKRHGFSGMPASHGASLSH 205

Query: 333 RSIGSTGQRDAPGRVFXXXXXXXXXXXKQCTVKNVWVYKIEPGRNLMWVKGQVPGAEGNF 154
           RSIGSTGQRD+PGRVF            Q TVKNVWVY+I+P RNL+++KGQVPG +G+F
Sbjct: 206 RSIGSTGQRDSPGRVFKNRKMPGRMGGVQRTVKNVWVYQIDPARNLLYLKGQVPGPQGSF 265

Query: 153 VFIKDAVYAKPDSSKLPFPTHFIPEGEETSELEPLVADLGDIDPFMVTD 7
           +F+KD++Y KPD + LPFPT+F  EG E+ ++EPL+AD GD+DPFM  D
Sbjct: 266 LFVKDSIYKKPDRALLPFPTYFSQEG-ESEDMEPLIADPGDVDPFMAAD 313


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