BLASTX nr result

ID: Dioscorea21_contig00013712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013712
         (1352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303430.1| predicted protein [Populus trichocarpa] gi|1...   205   2e-50
emb|CAN75134.1| hypothetical protein VITISV_018886 [Vitis vinifera]   201   4e-49
dbj|BAJ93737.1| predicted protein [Hordeum vulgare subsp. vulgare]    201   5e-49
dbj|BAJ91318.1| predicted protein [Hordeum vulgare subsp. vulgar...   201   5e-49
ref|XP_002278687.1| PREDICTED: uncharacterized protein LOC100252...   200   6e-49

>ref|XP_002303430.1| predicted protein [Populus trichocarpa] gi|118488795|gb|ABK96208.1|
            unknown [Populus trichocarpa] gi|222840862|gb|EEE78409.1|
            predicted protein [Populus trichocarpa]
          Length = 315

 Score =  205 bits (522), Expect = 2e-50
 Identities = 103/233 (44%), Positives = 148/233 (63%), Gaps = 4/233 (1%)
 Frame = +2

Query: 545  QKYLTGYFYEKHGQILESDFHGLAQEVGSDELSKSLVHSLKDVFGFSELNRHLIGEGSHR 724
            +KY+   ++EK+  +LE +F     +       K L  +L  +   S   RHLIGEGSHR
Sbjct: 54   RKYIMESYFEKYDSLLEPNFQNFIVDELLFNTCKLLPDNLNHLLRVSVPWRHLIGEGSHR 113

Query: 725  RLVTNFKLNIKSDDMSWLNNHYCEVVVIERLPIGVFADPFELQHLVEHQVFLDVAVFGDT 904
             + +  + +++ D MS L  H+C+V++IERLP GVFADPFELQHL++  VF DVAVFGDT
Sbjct: 114  HISSTIRFHMQPDSMSQLRAHFCKVIIIERLPTGVFADPFELQHLLKRGVFTDVAVFGDT 173

Query: 905  NLELPSALSNKSVVEVHMNTTHNVL---SRQSEITVELPLHARYPPLDVAGYSKIEFGQP 1075
            NLELPS LSN+S VE+HM      L     + EI+ +LPLHARYPPLD +GYS++EFG+P
Sbjct: 174  NLELPSVLSNQSAVEIHMKVAPTSLLGHISELEISADLPLHARYPPLDDSGYSEVEFGEP 233

Query: 1076 DLLMRCKPQVT-QRDSCSWILTGWSDDTHKNGIFWLVPCGNKEHTTLVSSITF 1231
            ++ +RC  +     +SC  + T     +  + + W +P G + H  +VS++TF
Sbjct: 234  EIFLRCSMEENGDHESCLLMPTNDRTGSRTDNVVWRIPSGIRAHAGIVSAVTF 286


>emb|CAN75134.1| hypothetical protein VITISV_018886 [Vitis vinifera]
          Length = 334

 Score =  201 bits (511), Expect = 4e-49
 Identities = 110/239 (46%), Positives = 152/239 (63%), Gaps = 7/239 (2%)
 Frame = +2

Query: 536  PCSQKYLTGYFYEKHGQILESDFHG-LAQEV--GSDELSKSLVHSLKDVFGFSELNRHLI 706
            P  +K++T  +++K+  +L+SDF   ++ E+  GS EL   L+ +L  V   S   R LI
Sbjct: 70   PYFEKHITKSYFDKYDSLLDSDFLDFISHELFPGSCEL---LLDNLNLVLRLSVQQRSLI 126

Query: 707  GEGSHRRLVTNFKLNIKSDDMSWLNNHYCEVVVIERLPIGVFADPFELQHLVEHQVFLDV 886
            G+GSHR L ++F+ NI+S+ ++ L  H+CE ++IE+LP G+F DPFELQHL++  VF+D 
Sbjct: 127  GDGSHRHLSSSFRFNIQSELIAELPIHFCEAIIIEKLPYGIFXDPFELQHLLQRGVFMDA 186

Query: 887  AVFGDTNLELPSALSNKSVVEVHMNTTHNVLSRQS---EITVELPLHARYPPLDVAGYSK 1057
            AVFGDTNLELPS  SN+S+VEVHM+   N  SR     EI ++LPLH RYPPL+ +GYS 
Sbjct: 187  AVFGDTNLELPSVHSNRSLVEVHMDVDLNTFSRHKDGLEINIDLPLHIRYPPLEESGYSN 246

Query: 1058 IEFGQPDLLMRCKPQV-TQRDSCSWILTGWSDDTHKNGIFWLVPCGNKEHTTLVSSITF 1231
            IE G PDL MRC  +  +   SC  +L           + W VP G K H   VS +TF
Sbjct: 247  IELGAPDLFMRCSIEAKSHNQSCLLMLKDNGVALGNGPVVWRVPSGIKAHARAVSIVTF 305


>dbj|BAJ93737.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 282

 Score =  201 bits (510), Expect = 5e-49
 Identities = 113/234 (48%), Positives = 147/234 (62%), Gaps = 1/234 (0%)
 Frame = +2

Query: 533  LPCSQKYLTGYFYEKHGQILESDFHGLAQEVGSDELSKSLVHSLKDVFGFSELNRHLIGE 712
            +PCS+ Y+         + L S    L +   + +L K L   L DV   SE++R L+GE
Sbjct: 35   MPCSRTYVADAHVGSLARQL-SQHRDLTEVPDTADLCKGLADEL-DVPALSEVHRQLVGE 92

Query: 713  GSHRRLVTNFKLNIKSDDM-SWLNNHYCEVVVIERLPIGVFADPFELQHLVEHQVFLDVA 889
            GSHRRL+ + K     D M  +L+ +   +V+IE+LP GVFADPFELQH VE +VFLDVA
Sbjct: 93   GSHRRLIYSVKFGNSKDGMVQFLDGYDASLVLIEKLPRGVFADPFELQHFVERKVFLDVA 152

Query: 890  VFGDTNLELPSALSNKSVVEVHMNTTHNVLSRQSEITVELPLHARYPPLDVAGYSKIEFG 1069
            VFGDTNLELPSALSN S VE+H +   +  S    + +ELPLHARYPPLD + Y+ +EFG
Sbjct: 153  VFGDTNLELPSALSNWSAVEIHFDLKPST-SMGYNLVIELPLHARYPPLDASDYATVEFG 211

Query: 1070 QPDLLMRCKPQVTQRDSCSWILTGWSDDTHKNGIFWLVPCGNKEHTTLVSSITF 1231
             PDLL+R + + T  DSC  +L    D T      W +PCG+K HT  VSS+TF
Sbjct: 212  SPDLLLRYRRKETHPDSCVCVLQN-LDATPVEKAAWRIPCGDKAHTGFVSSLTF 264


>dbj|BAJ91318.1| predicted protein [Hordeum vulgare subsp. vulgare]
            gi|326528395|dbj|BAJ93386.1| predicted protein [Hordeum
            vulgare subsp. vulgare]
          Length = 287

 Score =  201 bits (510), Expect = 5e-49
 Identities = 113/234 (48%), Positives = 147/234 (62%), Gaps = 1/234 (0%)
 Frame = +2

Query: 533  LPCSQKYLTGYFYEKHGQILESDFHGLAQEVGSDELSKSLVHSLKDVFGFSELNRHLIGE 712
            +PCS+ Y+         + L S    L +   + +L K L   L DV   SE++R L+GE
Sbjct: 40   MPCSRTYVADAHVGSLARQL-SQHRDLTEVPDTADLCKGLADEL-DVPALSEVHRQLVGE 97

Query: 713  GSHRRLVTNFKLNIKSDDM-SWLNNHYCEVVVIERLPIGVFADPFELQHLVEHQVFLDVA 889
            GSHRRL+ + K     D M  +L+ +   +V+IE+LP GVFADPFELQH VE +VFLDVA
Sbjct: 98   GSHRRLIYSVKFGNSKDGMVQFLDGYDASLVLIEKLPRGVFADPFELQHFVERKVFLDVA 157

Query: 890  VFGDTNLELPSALSNKSVVEVHMNTTHNVLSRQSEITVELPLHARYPPLDVAGYSKIEFG 1069
            VFGDTNLELPSALSN S VE+H +   +  S    + +ELPLHARYPPLD + Y+ +EFG
Sbjct: 158  VFGDTNLELPSALSNWSAVEIHFDLKPST-SMGYNLVIELPLHARYPPLDASDYATVEFG 216

Query: 1070 QPDLLMRCKPQVTQRDSCSWILTGWSDDTHKNGIFWLVPCGNKEHTTLVSSITF 1231
             PDLL+R + + T  DSC  +L    D T      W +PCG+K HT  VSS+TF
Sbjct: 217  SPDLLLRYRRKETHPDSCVCVLQN-LDATPVEKAAWRIPCGDKAHTGFVSSLTF 269


>ref|XP_002278687.1| PREDICTED: uncharacterized protein LOC100252266 [Vitis vinifera]
            gi|297742059|emb|CBI33846.3| unnamed protein product
            [Vitis vinifera]
          Length = 329

 Score =  200 bits (509), Expect = 6e-49
 Identities = 110/239 (46%), Positives = 152/239 (63%), Gaps = 7/239 (2%)
 Frame = +2

Query: 536  PCSQKYLTGYFYEKHGQILESDFHG-LAQEV--GSDELSKSLVHSLKDVFGFSELNRHLI 706
            P  +K++T  +++K+  +L+SDF   ++ E+  GS EL   L+ +L  V   S   R LI
Sbjct: 65   PYFEKHITKSYFDKYDSLLDSDFLDFISHELFPGSCEL---LLDNLNLVLRLSVQQRSLI 121

Query: 707  GEGSHRRLVTNFKLNIKSDDMSWLNNHYCEVVVIERLPIGVFADPFELQHLVEHQVFLDV 886
            G+GSHR L ++F+ NI+S+ ++ L  H+CE ++IE+LP G+FADPFELQHL++  VF+  
Sbjct: 122  GDGSHRHLSSSFRFNIQSELIAELPIHFCEAIIIEKLPYGIFADPFELQHLLQRGVFMGA 181

Query: 887  AVFGDTNLELPSALSNKSVVEVHMNTTHNVLSRQS---EITVELPLHARYPPLDVAGYSK 1057
            AVFGDTNLELPS  SN+S+VEVHM+   N  SR     EI ++LPLH RYPPL+ +GYS 
Sbjct: 182  AVFGDTNLELPSVHSNRSLVEVHMDVDLNTFSRHKDGLEINIDLPLHIRYPPLEESGYSN 241

Query: 1058 IEFGQPDLLMRCKPQV-TQRDSCSWILTGWSDDTHKNGIFWLVPCGNKEHTTLVSSITF 1231
            IE G PDL MRC  +  +   SC  +L           + W VP G K H   VS +TF
Sbjct: 242  IELGAPDLFMRCSIEAKSHNQSCLLMLKDNGVALGNGPVVWRVPSGIKAHARAVSIVTF 300


Top