BLASTX nr result

ID: Dioscorea21_contig00013691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013691
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297896.1| predicted protein [Populus trichocarpa] gi|1...    56   3e-06
dbj|BAJ86200.1| predicted protein [Hordeum vulgare subsp. vulgare]     55   5e-06
gb|AAP80636.1|AF475114_1 60s ribosomal protein L21, partial [Tri...    55   5e-06
ref|XP_004174077.1| PREDICTED: 60S ribosomal protein L21-1-like ...    55   6e-06
ref|XP_004168658.1| PREDICTED: 60S ribosomal protein L21-1-like ...    55   6e-06

>ref|XP_002297896.1| predicted protein [Populus trichocarpa] gi|118484851|gb|ABK94292.1|
           unknown [Populus trichocarpa]
           gi|118488855|gb|ABK96237.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|118489232|gb|ABK96422.1| unknown
           [Populus trichocarpa x Populus deltoides]
           gi|118489309|gb|ABK96459.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|222845154|gb|EEE82701.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/25 (100%), Positives = 25/25 (100%)
 Frame = +1

Query: 178 MPAGHGVRSRTRDLFARPFRKKGYI 252
           MPAGHGVRSRTRDLFARPFRKKGYI
Sbjct: 1   MPAGHGVRSRTRDLFARPFRKKGYI 25


>dbj|BAJ86200.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 191

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +1

Query: 175 EMPAGHGVRSRTRDLFARPFRKKGYI 252
           +MPAGHG+RSRTRDLFARPFRKKGYI
Sbjct: 27  KMPAGHGLRSRTRDLFARPFRKKGYI 52


>gb|AAP80636.1|AF475114_1 60s ribosomal protein L21, partial [Triticum aestivum]
          Length = 172

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +1

Query: 175 EMPAGHGVRSRTRDLFARPFRKKGYI 252
           +MPAGHG+RSRTRDLFARPFRKKGYI
Sbjct: 8   KMPAGHGLRSRTRDLFARPFRKKGYI 33


>ref|XP_004174077.1| PREDICTED: 60S ribosomal protein L21-1-like [Cucumis sativus]
          Length = 84

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = +1

Query: 178 MPAGHGVRSRTRDLFARPFRKKGYI 252
           MPAGHG+RSRTRDLFARPFRKKGYI
Sbjct: 1   MPAGHGLRSRTRDLFARPFRKKGYI 25


>ref|XP_004168658.1| PREDICTED: 60S ribosomal protein L21-1-like [Cucumis sativus]
          Length = 164

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/25 (96%), Positives = 25/25 (100%)
 Frame = +1

Query: 178 MPAGHGVRSRTRDLFARPFRKKGYI 252
           MPAGHG+RSRTRDLFARPFRKKGYI
Sbjct: 1   MPAGHGLRSRTRDLFARPFRKKGYI 25


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