BLASTX nr result
ID: Dioscorea21_contig00013636
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00013636
(2560 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga... 89 1e-28
emb|CAN70538.1| hypothetical protein VITISV_040070 [Vitis vinifera] 80 6e-27
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript... 82 3e-24
emb|CAN76026.1| hypothetical protein VITISV_027817 [Vitis vinifera] 84 4e-23
emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera] 84 7e-23
>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1365
Score = 89.0 bits (219), Expect(3) = 1e-28
Identities = 82/315 (26%), Positives = 129/315 (40%), Gaps = 20/315 (6%)
Frame = +2
Query: 950 SLMAKNVLSYLNEKRIFWVDILLAKYGLLNPWQCSIPPN----VSWFFRGLCRIVKEIRH 1117
+L+AK + N ++ +LLAKY +P + VSW RGLCR V++ R
Sbjct: 877 ALLAKQAIRIHNSRQSLISQVLLAKYKA-SPVDIVLRNRNLGRVSWGMRGLCRAVQDCRA 935
Query: 1118 CLWMQSVNPASVSFLYDHWFSEIPIAFKPTFXXXXXXXXXXXXXXCMHNNYWNLDALSDV 1297
Q N ++ S + D W E P+ K WN +
Sbjct: 936 GFTSQIGNGSNTSIVGDKWIREGPVIVKSGVNLAQMGIRQVKDLMNTQQKTWNSSLIWKC 995
Query: 1298 FGHNIETPILSQGSISPEDSNLWVWFPRSSKNNITAMVYSHLRSE----HTHSEHWIGWH 1465
F + +L+ + S+++VW S +Y+ + +T E+ W+
Sbjct: 996 FHPDTAMKVLATHIPVEDLSDIFVWSESKSGVPRVKDIYAFYLLDKGELNTTKENRQFWN 1055
Query: 1466 NLWRIHASPRVKFFIWTL*HGRIKTYDFLRSINLGLDSPCVFCGLVNESAAHLFCFCPKS 1645
W P+ KFF W L + + T LR N+ + C C E+ +HLF C S
Sbjct: 1056 KFWASDLLPKWKFFTWRLLNKALATSSNLRKRNILIQEMCSLCKQDKENESHLFRDCNIS 1115
Query: 1646 *FVWDKLAYLSGIDLNSDCLLSGE-WLE-----------LSSPNASIHMASLTVVALWFI 1789
VW + L GI + ++S E W++ + SP S +A+ LW I
Sbjct: 1116 RHVW--ASSLLGIRICPMTVISIEDWIKNFLKLLWKEDGVKSPRVSEFIAT-----LWAI 1168
Query: 1790 WKARCNLIFRNEQPN 1834
W R N+IFR+E+ N
Sbjct: 1169 WIHRNNVIFRSEEVN 1183
Score = 59.3 bits (142), Expect(3) = 1e-28
Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Frame = +1
Query: 391 NYLMYADDLIIITHATRRAARNVKLCLDIFSKLTGQTANSSKSNLY----VPHWFNKRVT 558
++L +ADD +I AT A VK L FS+L+G+ N +KS++ P F + +
Sbjct: 690 SHLFFADDSLIFFKATPTACAGVKDILARFSRLSGEVINYNKSHIMFSPNTPLKFKRYMR 749
Query: 559 TRIRDILNISIGSYPFVYLGILISYKRLAMACFQYMVDKVNRIASGWQRAKLSKPSKIVL 738
+ + S+G Y LG I + FQ +V+KV R S WQ LS +++
Sbjct: 750 SIVGTPSEESLGKY----LGCNIEVDGRSSRKFQPLVEKVERKVSSWQHLTLSHAGRVIF 805
Query: 739 INSVL 753
IN++L
Sbjct: 806 INNIL 810
Score = 27.7 bits (60), Expect(3) = 1e-28
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 780 VYPILDSILDNISKCARKLLWANCSNSSGIPLVSWHDTMLDKADRGVGIRDLRL 941
V+ I S D I+ + LWAN ++ S I S + K G+GIR++ L
Sbjct: 820 VFLIPKSTADKINAIFARFLWANPNSPSPIFWKSRKIIEMPKGGGGLGIRNVHL 873
Score = 79.0 bits (193), Expect = 6e-12
Identities = 37/105 (35%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Frame = +3
Query: 3 KPILESLISMEQCGFIAGRTPLDSIISVQEIVHSMNHDRSNPPRML-LKVDVKKAYDTLR 179
KPIL+S+++ Q F+ GR D+ + E+V+ + + + LK+D+ KAYD +
Sbjct: 539 KPILKSIVTPYQNAFVPGRLISDNCLIAHEVVNLIKQRKKGTHFLAALKIDMFKAYDKVD 598
Query: 180 WDVILATLARVGFPNIWIAWIKGCLDSVSFSFLINGQPSRWIKPS 314
WD + L ++GFP+ + WI C+ +VS+S ++NG+P+ KPS
Sbjct: 599 WDFLFWLLTQMGFPSFYRQWIMQCVTTVSYSIIVNGEPTTRFKPS 643
>emb|CAN70538.1| hypothetical protein VITISV_040070 [Vitis vinifera]
Length = 2095
Score = 80.5 bits (197), Expect(4) = 6e-27
Identities = 40/98 (40%), Positives = 57/98 (58%)
Frame = +3
Query: 3 KPILESLISMEQCGFIAGRTPLDSIISVQEIVHSMNHDRSNPPRMLLKVDVKKAYDTLRW 182
K ++ +IS Q F+ GR LD+++ E V S D N +L K+D++KAYD + W
Sbjct: 1416 KKVMGKVISESQNAFVEGRQILDAVLIANEAVDSRLKD--NVGGVLCKLDIEKAYDXVSW 1473
Query: 183 DVILATLARVGFPNIWIAWIKGCLDSVSFSFLINGQPS 296
+LA L +GF WI WI C+ +V FS L+NG PS
Sbjct: 1474 SFLLAVLKEMGFGERWIKWIDWCISTVKFSXLVNGSPS 1511
Score = 43.1 bits (100), Expect(4) = 6e-27
Identities = 71/343 (20%), Positives = 119/343 (34%), Gaps = 46/343 (13%)
Frame = +2
Query: 935 SISKTSLMAKNVLSYLNEKRIFWVDILLAKYGLLNPWQCSIPPNVSWFFR--------GL 1090
S+ +L+ K + NE+ W ++ KYG+ W R GL
Sbjct: 1747 SLMNNALLCKWNWRFANERDALWRSVISLKYGV---------EEGGWXTRDVLGRNGVGL 1797
Query: 1091 CRIVKEIRHCLWMQSV-----NPASVSFLYDHWFSEIPI--AFKPTFXXXXXXXXXXXXX 1249
+ +++ + L+ V N V F D W + P+ +F F
Sbjct: 1798 WKAIRK-KWGLFDGRVAFHLGNGQRVKFWKDKWCGDGPLCESFPSLF------------S 1844
Query: 1250 XCMHNNYWNLDALSDVFGHNIETPILSQG-------------------SISPEDSNLWVW 1372
M N W D + V TP+ ++ + E+ + +W
Sbjct: 1845 ISMSKNAWVSDVWNPVGDGIGWTPLFARAFNDWEIILLERLLQKIQAXRVQREEEDRVIW 1904
Query: 1373 FPRSSKNNITAM--VYSHLR----SEHTHSEHWIGWHNLWRIHASPRVKFFIWTL*HGRI 1534
+SK+ + ++ +YS + S W R P+V FF W G++
Sbjct: 1905 --TASKDGVFSVRXLYSMMEPGGLSLXPSXRIW-------RARVPPKVAFFAWEAXWGKV 1955
Query: 1535 KTYDFLRSINLGLDSPCVFCGLVNESAAHLFCFCPKS*FVWDKLAYLSGIDLNSDCLLSG 1714
T + L+ L + C C E+ HL C K+ +W+ L L GI C +
Sbjct: 1956 LTQEQLQRRGFSLANRCFLCLSEEETVDHLLLHCIKTRVLWNLLFSLFGISWTLSCSVKA 2015
Query: 1715 EWLELSS------PNASIHMASLTVVALWFIWKARCNLIFRNE 1825
+ + MA L + W +WK R L F +E
Sbjct: 2016 TLXGWNGGFVGKRXKKAWQMAPLCI--FWTVWKERNRLAFGDE 2056
Score = 37.0 bits (84), Expect(4) = 6e-27
Identities = 32/144 (22%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Frame = +1
Query: 352 FIPGW-CSSLRAD---FNYLMYADDLIIITHATRRAARNVKLCLDIFSKLTGQTANSSKS 519
++ GW S R + ++L++ADD ++ + + L F +G N KS
Sbjct: 1550 YLAGWKVSGGRGEGMHISHLLFADDTLVFCEDSPDEMTYLSWLLMWFEACSGLRINLEKS 1609
Query: 520 NLYVPHWFNKRVTTRIRDI------LNISIGSYPFVYLGILISYKRLAMACFQYMVDKVN 681
+ +P R+ +I L +G +P YLG+ + ++A + + ++
Sbjct: 1610 EI-IP-------VGRVLNIEGLALELGCKVGGFPSSYLGMPLGAAFNSLAVWNGVEERFR 1661
Query: 682 RIASGWQRAKLSKPSKIVLINSVL 753
R + W+R +SK ++ LI S +
Sbjct: 1662 RRLAMWKRQYISKGGRLTLIRSTM 1685
Score = 28.9 bits (63), Expect(4) = 6e-27
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +3
Query: 765 ILLSPVYPILDSILDNISKCARKLLWANCSNSSGIPLVSWHDTMLDKADRGVGIRDLRL 941
I L ++ + + + K R LW + + LV W+ L+K G+G+R+L L
Sbjct: 1690 IYLMSLFHLPRKVRMRLEKIQRDFLWGGGTLAHKPHLVRWNLICLEKRKGGLGVRNLSL 1748
>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 732
Score = 81.6 bits (200), Expect(3) = 3e-24
Identities = 40/94 (42%), Positives = 54/94 (57%)
Frame = +3
Query: 3 KPILESLISMEQCGFIAGRTPLDSIISVQEIVHSMNHDRSNPPRMLLKVDVKKAYDTLRW 182
K ++ LI Q FI+GR D+I+ +QE VHSM + MLLK+D++KAYD +RW
Sbjct: 87 KRVISKLIRPAQASFISGRLAADNIVIMQEAVHSMRRKKGRKGWMLLKLDLEKAYDRIRW 146
Query: 183 DVILATLARVGFPNIWIAWIKGCLDSVSFSFLIN 284
+ + TL V P WI WI C+ S S L N
Sbjct: 147 EFLEDTLRAVRLPEKWIVWIMQCVTEPSMSLLWN 180
Score = 47.4 bits (111), Expect(3) = 3e-24
Identities = 30/121 (24%), Positives = 59/121 (48%)
Frame = +1
Query: 391 NYLMYADDLIIITHATRRAARNVKLCLDIFSKLTGQTANSSKSNLYVPHWFNKRVTTRIR 570
+++ +ADDLI+ A+ R ++ L+ F +GQ + KS ++ ++ + I
Sbjct: 202 SHICFADDLILFAEASVAQIRVIRRVLERFCVASGQKVSLEKSKIFFSENVSRDLGKLIS 261
Query: 571 DILNISIGSYPFVYLGILISYKRLAMACFQYMVDKVNRIASGWQRAKLSKPSKIVLINSV 750
D IS YLG+ + +R+ F +++K+ +GW+ LS ++ L +V
Sbjct: 262 DESGISSTRELGKYLGMPVLQRRINKDTFGDILEKLTTRLAGWKGRFLSLAGRVTLTKAV 321
Query: 751 L 753
L
Sbjct: 322 L 322
Score = 31.6 bits (70), Expect(3) = 3e-24
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 798 SILDNISKCARKLLWANCSNSSGIPLVSWHDTMLDKADRGVGIR 929
S LD + K +R LW + L+SW +++ G+GIR
Sbjct: 338 STLDGLDKVSRSFLWGSSVTQRKQHLISWKRVCKPRSEGGLGIR 381
>emb|CAN76026.1| hypothetical protein VITISV_027817 [Vitis vinifera]
Length = 1728
Score = 84.3 bits (207), Expect(3) = 4e-23
Identities = 40/104 (38%), Positives = 65/104 (62%)
Frame = +3
Query: 3 KPILESLISMEQCGFIAGRTPLDSIISVQEIVHSMNHDRSNPPRMLLKVDVKKAYDTLRW 182
K ++ +IS Q F+ GR LD+++ E + S D N P +LLK+D++KA+D + W
Sbjct: 617 KTVMGEVISDSQHAFVHGRQILDAVLIANEALDSRLKD--NIPGLLLKMDIEKAFDHVNW 674
Query: 183 DVILATLARVGFPNIWIAWIKGCLDSVSFSFLINGQPSRWIKPS 314
+ ++ ++++GF + WI WIK C + SFS LING PS + + S
Sbjct: 675 NFLMEVMSKMGFGHRWINWIKWCCSTTSFSILINGSPSGFFRSS 718
Score = 43.5 bits (101), Expect(3) = 4e-23
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 4/143 (2%)
Frame = +1
Query: 337 ARTLNFIPGWCSSLRAD----FNYLMYADDLIIITHATRRAARNVKLCLDIFSKLTGQTA 504
AR NFI G+ R ++L++ADD +I A + + F ++G
Sbjct: 746 ARNGNFISGFRVGGRGSEGLVVSHLLFADDTLIFCDADADQLQYLSWTFMWFEAISGLKV 805
Query: 505 NSSKSNLYVPHWFNKRVTTRIRDILNISIGSYPFVYLGILISYKRLAMACFQYMVDKVNR 684
N +K+ +P + + T + +L IGS P YLG+ + ++ + + ++ +
Sbjct: 806 NLNKTEA-IPVGEDIPMET-LAAVLGCKIGSLPTSYLGLPLGAPYKSIRVWDAVEERFRK 863
Query: 685 IASGWQRAKLSKPSKIVLINSVL 753
S W+R LSK ++ L+ S L
Sbjct: 864 RLSLWKRQYLSKGGRLTLLKSTL 886
Score = 28.9 bits (63), Expect(3) = 4e-23
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +3
Query: 780 VYPILDSILDNISKCARKLLWANCSNSSGIPLVSWHDTMLDKADRGVGIRDL 935
++ I + + K R LW + LVSW DK G+GIR L
Sbjct: 896 LFVIPKRVCARLEKIQRDFLWGGGALEKKPHLVSWKVVCADKKKGGLGIRSL 947
>emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera]
Length = 4128
Score = 83.6 bits (205), Expect(3) = 7e-23
Identities = 40/104 (38%), Positives = 64/104 (61%)
Frame = +3
Query: 3 KPILESLISMEQCGFIAGRTPLDSIISVQEIVHSMNHDRSNPPRMLLKVDVKKAYDTLRW 182
K ++ +IS Q F+ GR LD ++ E + S D N P +LLK+D++KA+D + W
Sbjct: 2937 KTVMGEVISDSQHAFVHGRQILDXVLIANEALDSRLKD--NIPGLLLKMDIEKAFDHVNW 2994
Query: 183 DVILATLARVGFPNIWIAWIKGCLDSVSFSFLINGQPSRWIKPS 314
+ ++ ++++GF + WI WIK C + SFS LING PS + + S
Sbjct: 2995 NFLMEVMSKMGFGHRWINWIKWCCSTTSFSILINGSPSGFFRSS 3038
Score = 43.5 bits (101), Expect(3) = 7e-23
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 4/143 (2%)
Frame = +1
Query: 337 ARTLNFIPGWCSSLRAD----FNYLMYADDLIIITHATRRAARNVKLCLDIFSKLTGQTA 504
AR NFI G+ R ++L++ADD +I A + + F ++G
Sbjct: 3066 ARNGNFISGFRVGGRGSEGLVVSHLLFADDTLIFCDADADQLQYLSWTFMWFEAISGLKV 3125
Query: 505 NSSKSNLYVPHWFNKRVTTRIRDILNISIGSYPFVYLGILISYKRLAMACFQYMVDKVNR 684
N +K+ +P + + T + +L IGS P YLG+ + ++ + + ++ +
Sbjct: 3126 NLNKTEA-IPVGEDIPMET-LAAVLGCKIGSLPTSYLGLPLGAPYKSIRVWDAVEERFRK 3183
Query: 685 IASGWQRAKLSKPSKIVLINSVL 753
S W+R LSK ++ L+ S L
Sbjct: 3184 RLSLWKRQYLSKGGRLTLLKSTL 3206
Score = 28.9 bits (63), Expect(3) = 7e-23
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +3
Query: 780 VYPILDSILDNISKCARKLLWANCSNSSGIPLVSWHDTMLDKADRGVGIRDL 935
++ I + + K R LW + LVSW DK G+GIR L
Sbjct: 3216 LFVIPKRVCARLEKIQRDFLWGGGALEKKPHLVSWKVVCADKKKGGLGIRSL 3267
Score = 76.6 bits (187), Expect(3) = 6e-18
Identities = 37/102 (36%), Positives = 61/102 (59%)
Frame = +3
Query: 3 KPILESLISMEQCGFIAGRTPLDSIISVQEIVHSMNHDRSNPPRMLLKVDVKKAYDTLRW 182
K + ++S Q FI R LD+ + E V S + N P +LLK+D++KA+D + W
Sbjct: 1243 KQXIGEVVSEYQHAFIRNRQILDAALIANETVDSRL--KVNIPGLLLKLDIEKAFDHVNW 1300
Query: 183 DVILATLARVGFPNIWIAWIKGCLDSVSFSFLINGQPSRWIK 308
D +++ ++++GF WI WI C+ + +FS LING PS + +
Sbjct: 1301 DCLVSVMSKMGFGQKWINWISWCISTTNFSILINGTPSDFFR 1342
Score = 33.5 bits (75), Expect(3) = 6e-18
Identities = 26/112 (23%), Positives = 47/112 (41%)
Frame = +1
Query: 418 IIITHATRRAARNVKLCLDIFSKLTGQTANSSKSNLYVPHWFNKRVTTRIRDILNISIGS 597
+++ A R + L F ++G N KS + + I +L IG+
Sbjct: 1359 LLVMEADSGQLRYLSWVLLWFEAISGLXVNRDKSEVIPVGRVD--YLENIVSVLGCRIGN 1416
Query: 598 YPFVYLGILISYKRLAMACFQYMVDKVNRIASGWQRAKLSKPSKIVLINSVL 753
P YLG+ + + + + ++ + S W+R LSK ++ LI S L
Sbjct: 1417 LPSSYLGLPLGAPFKSPRVWDVVEERFRKCLSLWKRQYLSKGGRLTLIKSTL 1468
Score = 28.9 bits (63), Expect(3) = 6e-18
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +3
Query: 765 ILLSPVYPILDSILDNISKCARKLLWANCSNSSGIPLVSWHDTMLDKADRGVGIRDL 935
I L ++ I + I K R LW + LV+W D G+GIR L
Sbjct: 1473 IYLMSLFVIPRKVCARIEKIQRDFLWGGGALEKKPHLVNWSAVCTDMRQGGLGIRSL 1529