BLASTX nr result
ID: Dioscorea21_contig00013597
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00013597
(1326 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002320514.1| predicted protein [Populus trichocarpa] gi|2... 506 e-141
ref|XP_002530223.1| pentatricopeptide repeat-containing protein,... 498 e-138
ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containi... 484 e-134
ref|XP_002869597.1| pentatricopeptide repeat-containing protein ... 474 e-131
ref|NP_194398.1| pentatricopeptide repeat-containing protein [Ar... 469 e-130
>ref|XP_002320514.1| predicted protein [Populus trichocarpa] gi|222861287|gb|EEE98829.1|
predicted protein [Populus trichocarpa]
Length = 478
Score = 506 bits (1302), Expect = e-141
Identities = 248/431 (57%), Positives = 317/431 (73%)
Frame = +3
Query: 6 NHLLLKVHRDPILSVELYNRILIQNPSSQSLDTHAIILHILTKSRKFISAESLLRKTLIP 185
NH+LLK+ +D +LS+E +N + NP S +L+TH+IILHILTK KF SA+S+LR L
Sbjct: 46 NHILLKIQKDHVLSLEFFNSLKTLNPISLTLETHSIILHILTKKSKFKSAQSILRTLLAS 105
Query: 186 QTLTSSSDLFDAILHSYRLCDSTPNVFDSLFKTYAHLKKFRNATETFHRMRDHGFLPTVR 365
+++ LFD +L SYR+CDS+P VFDSLFKTYAH+ KFRNAT+ F RM+D+GFLPTV
Sbjct: 106 RSIDLPGKLFDTLLFSYRMCDSSPRVFDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVE 165
Query: 366 SCNAFLSSLLNHGRNDIVVSFYREMKRCRISPNVFTLNMVLCALCGLGRLEKAMDELEKM 545
SCNA+LSSLL+ R DI ++FYREM+RCRISPN +T N+VL ALC G+LEKA++ L +M
Sbjct: 166 SCNAYLSSLLDFHRVDIALTFYREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREM 225
Query: 546 EIMGISPNVASFNTMIAGYCXXXXXXXXXXXXXXXXXXXXEPNVITFNTLIHQFCMEGKM 725
E +GI+PNV S+NT+IAG+C EPNV+TFN+LIH FC EGK+
Sbjct: 226 ESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKL 285
Query: 726 HEANRIFREMKVAEVSPNTVTFNTLIAGYCRENNGEMGFRVYEEMVKNGVEVDILTYNSL 905
HEANR F EMKV V+PNTVT+NTLI GY + N M +VYEEM++NGV+ DILTYN+L
Sbjct: 286 HEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNAL 345
Query: 906 ILGLCNEGKTRKAAHLVRELDRGNLVPNASTYFALITGQCKKQNSERALEIYKVMKMSGC 1085
ILGLC EGKT+KAA LV+ELD+ NLVPNASTY ALI+GQC ++NS+RA ++YK M SGC
Sbjct: 346 ILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGC 405
Query: 1086 HPNAETFDLLISTFVKNKDFEGAAEVLKEMLERWMVPGKVLLTELFDGLHLSGKRHLMDE 1265
HPN +TF +L S FVKN+DFEGA VL +M R M L E++DGL GK +L +
Sbjct: 406 HPNEQTFKMLTSAFVKNEDFEGAFNVLMDMFARSMASDSNTLLEIYDGLCQCGKENLAMK 465
Query: 1266 LLSDVNGGRFV 1298
L ++ R +
Sbjct: 466 LCHEMEARRLI 476
>ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530270|gb|EEF32170.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 517
Score = 498 bits (1281), Expect = e-138
Identities = 241/432 (55%), Positives = 322/432 (74%)
Frame = +3
Query: 9 HLLLKVHRDPILSVELYNRILIQNPSSQSLDTHAIILHILTKSRKFISAESLLRKTLIPQ 188
H+LLK+ +D +LS+E +N + +NPSS +L+TH++ILHILTK+RKF SAE +L+ L+
Sbjct: 64 HILLKIQKDHVLSLEFFNWVQTENPSSHTLETHSMILHILTKNRKFKSAELILKSVLVKG 123
Query: 189 TLTSSSDLFDAILHSYRLCDSTPNVFDSLFKTYAHLKKFRNATETFHRMRDHGFLPTVRS 368
+ LF+AIL+SYR+CDS+P VFDSLFKT AH+KKFRNAT+TF +M+ +GFLPTV S
Sbjct: 124 FIDLPDKLFEAILYSYRMCDSSPRVFDSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVES 183
Query: 369 CNAFLSSLLNHGRNDIVVSFYREMKRCRISPNVFTLNMVLCALCGLGRLEKAMDELEKME 548
CNA+LSSLL+ R DI ++FY+EM+RCRISPNV+T NMV+ A C G+LEKA+ E+ME
Sbjct: 184 CNAYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEME 243
Query: 549 IMGISPNVASFNTMIAGYCXXXXXXXXXXXXXXXXXXXXEPNVITFNTLIHQFCMEGKMH 728
+GISPN S+NT+I GYC E NV+TFN+LI FC EGK+H
Sbjct: 244 SVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLH 303
Query: 729 EANRIFREMKVAEVSPNTVTFNTLIAGYCRENNGEMGFRVYEEMVKNGVEVDILTYNSLI 908
EA+++F EMKV V+PNT+T+NTLI G+ + N EMG R+YEEM +NGV+ DILTYN+LI
Sbjct: 304 EASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALI 363
Query: 909 LGLCNEGKTRKAAHLVRELDRGNLVPNASTYFALITGQCKKQNSERALEIYKVMKMSGCH 1088
LGLC EGKT+KAA++V+ELD+ NLVPNAST+ ALI+GQC + NS+RA ++YK M GCH
Sbjct: 364 LGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCH 423
Query: 1089 PNAETFDLLISTFVKNKDFEGAAEVLKEMLERWMVPGKVLLTELFDGLHLSGKRHLMDEL 1268
PN +TF++L+S F KN+DFEGA VL EM ER PG +L+E++ GL GK HL +L
Sbjct: 424 PNEQTFNMLVSAFCKNEDFEGAFLVLMEMFERCFTPGSDVLSEIYHGLCCCGKEHLAMKL 483
Query: 1269 LSDVNGGRFVSR 1304
S++ +++
Sbjct: 484 SSELKARHMMTK 495
>ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 484 bits (1246), Expect = e-134
Identities = 236/424 (55%), Positives = 317/424 (74%)
Frame = +3
Query: 9 HLLLKVHRDPILSVELYNRILIQNPSSQSLDTHAIILHILTKSRKFISAESLLRKTLIPQ 188
H++LK+ +D +LS E +N + QNP+ Q+L+T++IILHILTK+ KF SAES+L+ L
Sbjct: 162 HIMLKIKKDHVLSFEFFNWVKAQNPNCQTLETYSIILHILTKNHKFKSAESVLKGILGSG 221
Query: 189 TLTSSSDLFDAILHSYRLCDSTPNVFDSLFKTYAHLKKFRNATETFHRMRDHGFLPTVRS 368
++ S LF+AIL+SYR+CDS+P VFDSLFKTYA +KK RNA + F +M+D+GFLP V S
Sbjct: 222 SIDHPSKLFEAILYSYRICDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVES 281
Query: 369 CNAFLSSLLNHGRNDIVVSFYREMKRCRISPNVFTLNMVLCALCGLGRLEKAMDELEKME 548
CNA++S+ ++ R DI ++FYREM+R RISPNV+TLNMV+CA C G+LEKA++ ++ME
Sbjct: 282 CNAYISASISLQRGDIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRME 341
Query: 549 IMGISPNVASFNTMIAGYCXXXXXXXXXXXXXXXXXXXXEPNVITFNTLIHQFCMEGKMH 728
MG SP + S+NT+IAGYC P+ +TFNTLI+ FC GK+H
Sbjct: 342 TMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLH 401
Query: 729 EANRIFREMKVAEVSPNTVTFNTLIAGYCRENNGEMGFRVYEEMVKNGVEVDILTYNSLI 908
EAN+IF EMK +V PNT+T+NTLI GY + N EMG R+++EM++NG++ DILTYN+LI
Sbjct: 402 EANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALI 461
Query: 909 LGLCNEGKTRKAAHLVRELDRGNLVPNASTYFALITGQCKKQNSERALEIYKVMKMSGCH 1088
LGLC EG+T+KAA+LV+ELDR NLVPN+ST+ ALITGQC ++NSERA ++YK M SGCH
Sbjct: 462 LGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCH 521
Query: 1089 PNAETFDLLISTFVKNKDFEGAAEVLKEMLERWMVPGKVLLTELFDGLHLSGKRHLMDEL 1268
PN TF +LISTF KN+DF+GA EV++EM ER + P L+EL GL LSGK L +L
Sbjct: 522 PNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKL 581
Query: 1269 LSDV 1280
++
Sbjct: 582 CKEM 585
Score = 90.9 bits (224), Expect = 7e-16
Identities = 71/310 (22%), Positives = 123/310 (39%), Gaps = 37/310 (11%)
Frame = +3
Query: 225 LHSYRLCDSTPNVFDSLFKTYAHLK--KFRNATETFHRMRDHGFLPTVRSCNAFLSSLLN 398
+ YR+ +PNV+ A K K A E F RM GF PT+ S N ++ N
Sbjct: 305 MQRYRI---SPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCN 361
Query: 399 HGRNDIVVSFYREMKRCRISPNVFTLNMVLCALCGLGRLEKAMDELEKMEIMGISPNVAS 578
G + + M++ + P+ T N ++ C G+L +A +M+ + PN +
Sbjct: 362 KGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTIT 421
Query: 579 FNTMIAGYCXXXXXXXXXXXXXXXXXXXXEPNVITFNTLIHQFCMEGKMHEANRIFREMK 758
+NT+I GY + +++T+N LI CMEG+ +A + +E+
Sbjct: 422 YNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELD 481
Query: 759 VAEVSPNTVTFNTLI-----------------------------------AGYCRENNGE 833
+ PN+ TF+ LI + +C+ + +
Sbjct: 482 RENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFD 541
Query: 834 MGFRVYEEMVKNGVEVDILTYNSLILGLCNEGKTRKAAHLVRELDRGNLVPNASTYFALI 1013
V EM + + D T + L GL GK A L +E++ +L+P I
Sbjct: 542 GAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEMEMKHLMPEGFDKSKTI 601
Query: 1014 TGQCKKQNSE 1043
+ + + E
Sbjct: 602 NFRAESEEKE 611
>ref|XP_002869597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297315433|gb|EFH45856.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 538
Score = 474 bits (1220), Expect = e-131
Identities = 231/434 (53%), Positives = 314/434 (72%)
Frame = +3
Query: 9 HLLLKVHRDPILSVELYNRILIQNPSSQSLDTHAIILHILTKSRKFISAESLLRKTLIPQ 188
++LLK+ +D +LS E +N +NP+S SL+THAI+LH LTK+RKF SAES+LR L+
Sbjct: 86 NVLLKIQKDYLLSFEFFNWAKTRNPASHSLETHAIVLHTLTKNRKFKSAESILRDVLVNG 145
Query: 189 TLTSSSDLFDAILHSYRLCDSTPNVFDSLFKTYAHLKKFRNATETFHRMRDHGFLPTVRS 368
+ + +FDA+L+SYR CDSTP VFDSLFKT+AHLKKFRNAT+TF +M+D+GFLPTV S
Sbjct: 146 GVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVES 205
Query: 369 CNAFLSSLLNHGRNDIVVSFYREMKRCRISPNVFTLNMVLCALCGLGRLEKAMDELEKME 548
CNA++SSLL GR DI + FYREM+RC+ISPN +TLNMV+ C G+L+K ++ L+ ME
Sbjct: 206 CNAYMSSLLGQGRVDIALRFYREMRRCKISPNTYTLNMVMSGYCRSGKLDKGIELLQDME 265
Query: 549 IMGISPNVASFNTMIAGYCXXXXXXXXXXXXXXXXXXXXEPNVITFNTLIHQFCMEGKMH 728
+G S+NT+IAG+C +PNV+TFNTLIH FC K+
Sbjct: 266 RLGFRATHVSYNTLIAGHCEKGLLSSALKLKNMMGKNGLQPNVVTFNTLIHGFCRAVKLQ 325
Query: 729 EANRIFREMKVAEVSPNTVTFNTLIAGYCRENNGEMGFRVYEEMVKNGVEVDILTYNSLI 908
EA+++F EMK + PNTVT+NTLI GY ++ + EM FR YE+MV NG++ DILTYN+LI
Sbjct: 326 EASKVFGEMKALNLPPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNTLI 385
Query: 909 LGLCNEGKTRKAAHLVRELDRGNLVPNASTYFALITGQCKKQNSERALEIYKVMKMSGCH 1088
LGLC + KTRKAA V+ELD+ NLVPN+ST+ ALI GQC ++N++R E+YK M SGCH
Sbjct: 386 LGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRRNADRGFELYKSMIRSGCH 445
Query: 1089 PNAETFDLLISTFVKNKDFEGAAEVLKEMLERWMVPGKVLLTELFDGLHLSGKRHLMDEL 1268
PN +TF++LIS F KN+DF+GAA+VL+EM+ R + + ++ +GL+ GK L+ EL
Sbjct: 446 PNEQTFNILISAFCKNEDFDGAAQVLREMVRRSIPLDSRTVHQVCNGLNHQGKDQLVKEL 505
Query: 1269 LSDVNGGRFVSRVL 1310
L ++ G +F+ L
Sbjct: 506 LQEMEGKKFLQEPL 519
>ref|NP_194398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186944|ref|NP_001190849.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|75213515|sp|Q9SZ10.1|PP338_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g26680, mitochondrial; Flags: Precursor
gi|4455191|emb|CAB36514.1| putative protein [Arabidopsis
thaliana] gi|7269520|emb|CAB79523.1| putative protein
[Arabidopsis thaliana] gi|332659836|gb|AEE85236.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana] gi|332659837|gb|AEE85237.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 521
Score = 469 bits (1206), Expect = e-130
Identities = 226/430 (52%), Positives = 312/430 (72%)
Frame = +3
Query: 9 HLLLKVHRDPILSVELYNRILIQNPSSQSLDTHAIILHILTKSRKFISAESLLRKTLIPQ 188
++LLK+ +D +LS+E +N +NP S SL+THAI+LH LTK+RKF SAES+LR L+
Sbjct: 86 NVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNG 145
Query: 189 TLTSSSDLFDAILHSYRLCDSTPNVFDSLFKTYAHLKKFRNATETFHRMRDHGFLPTVRS 368
+ + +FDA+L+SYR CDSTP VFDSLFKT+AHLKKFRNAT+TF +M+D+GFLPTV S
Sbjct: 146 GVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVES 205
Query: 369 CNAFLSSLLNHGRNDIVVSFYREMKRCRISPNVFTLNMVLCALCGLGRLEKAMDELEKME 548
CNA++SSLL GR DI + FYREM+RC+ISPN +TLNMV+ C G+L+K ++ L+ ME
Sbjct: 206 CNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDME 265
Query: 549 IMGISPNVASFNTMIAGYCXXXXXXXXXXXXXXXXXXXXEPNVITFNTLIHQFCMEGKMH 728
+G S+NT+IAG+C +PNV+TFNTLIH FC K+
Sbjct: 266 RLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQ 325
Query: 729 EANRIFREMKVAEVSPNTVTFNTLIAGYCRENNGEMGFRVYEEMVKNGVEVDILTYNSLI 908
EA+++F EMK V+PNTVT+NTLI GY ++ + EM FR YE+MV NG++ DILTYN+LI
Sbjct: 326 EASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALI 385
Query: 909 LGLCNEGKTRKAAHLVRELDRGNLVPNASTYFALITGQCKKQNSERALEIYKVMKMSGCH 1088
GLC + KTRKAA V+ELD+ NLVPN+ST+ ALI GQC ++N++R E+YK M SGCH
Sbjct: 386 FGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCH 445
Query: 1089 PNAETFDLLISTFVKNKDFEGAAEVLKEMLERWMVPGKVLLTELFDGLHLSGKRHLMDEL 1268
PN +TF++L+S F +N+DF+GA++VL+EM+ R + + ++ +GL GK L+ +L
Sbjct: 446 PNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKL 505
Query: 1269 LSDVNGGRFV 1298
L ++ G +F+
Sbjct: 506 LQEMEGKKFL 515