BLASTX nr result

ID: Dioscorea21_contig00013582 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013582
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545449.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   169   4e-40
ref|XP_003519499.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   165   8e-39
ref|XP_002283612.2| PREDICTED: E3 ubiquitin-protein ligase RING1...   158   1e-36
ref|XP_003617180.1| Thioredoxin-related protein [Medicago trunca...   157   2e-36
ref|XP_003617179.1| Thioredoxin-related protein [Medicago trunca...   157   2e-36

>ref|XP_003545449.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
           [Glycine max] gi|356554227|ref|XP_003545450.1|
           PREDICTED: E3 ubiquitin-protein ligase RING1-like
           isoform 2 [Glycine max] gi|356554229|ref|XP_003545451.1|
           PREDICTED: E3 ubiquitin-protein ligase RING1-like
           isoform 3 [Glycine max] gi|356554231|ref|XP_003545452.1|
           PREDICTED: E3 ubiquitin-protein ligase RING1-like
           isoform 4 [Glycine max]
          Length = 336

 Score =  169 bits (429), Expect = 4e-40
 Identities = 82/145 (56%), Positives = 96/145 (66%)
 Frame = -2

Query: 742 QKHLRRDSHCPVCKEQFELGSEARVMPCKHIYHSDCIVPWLVQHNTCPVCRLELLHPXXX 563
           Q HLR DSHCPVCKE+FELG+EAR MPC HIYHSDCIVPWLVQHN+CPVCR+EL      
Sbjct: 193 QAHLRSDSHCPVCKEKFELGTEAREMPCNHIYHSDCIVPWLVQHNSCPVCRVELPPQGQA 252

Query: 562 XXXXXXXXXXXXXXXXXXXXXXXXSMGTESDGDRNGRRNPFSFLWPFRTSNSNPGSHQHE 383
                                   S G E+    +GRRNPFSFLWPFR+SNSN  +H  E
Sbjct: 253 SSRGTRSWGGRNASNSSSSGSNDSSRGRENSHQNHGRRNPFSFLWPFRSSNSN-NNHYSE 311

Query: 382 SGGSNSASVPEDNNHPMTYSGWPFD 308
           +GGS+S++ P+ NN   +YSGWPFD
Sbjct: 312 TGGSSSSTTPDQNN-GTSYSGWPFD 335


>ref|XP_003519499.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           RING1-like [Glycine max]
          Length = 335

 Score =  165 bits (418), Expect = 8e-39
 Identities = 80/145 (55%), Positives = 95/145 (65%)
 Frame = -2

Query: 742 QKHLRRDSHCPVCKEQFELGSEARVMPCKHIYHSDCIVPWLVQHNTCPVCRLELLHPXXX 563
           Q HLR DSHCPVCKE+FELG+EAR MPC HIYHSDCIVPWLVQHN+CPVCR+EL      
Sbjct: 192 QAHLRLDSHCPVCKEKFELGTEAREMPCNHIYHSDCIVPWLVQHNSCPVCRVELPPQGQA 251

Query: 562 XXXXXXXXXXXXXXXXXXXXXXXXSMGTESDGDRNGRRNPFSFLWPFRTSNSNPGSHQHE 383
                                   S G E+    +GRRNP SFLWPFR+SNSN  +H  +
Sbjct: 252 SSRGTQNWGGRNDSNTSSSGSNDSSRGRENSRQNHGRRNPSSFLWPFRSSNSN-NNHHSD 310

Query: 382 SGGSNSASVPEDNNHPMTYSGWPFD 308
           +GGS+S++ P+ NN   +YSGWPFD
Sbjct: 311 TGGSSSSNTPDQNN-GTSYSGWPFD 334


>ref|XP_002283612.2| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1 [Vitis
           vinifera]
          Length = 269

 Score =  158 bits (400), Expect = 1e-36
 Identities = 79/145 (54%), Positives = 92/145 (63%)
 Frame = -2

Query: 742 QKHLRRDSHCPVCKEQFELGSEARVMPCKHIYHSDCIVPWLVQHNTCPVCRLELLHPXXX 563
           QKHLR DSHCPVCK++FELGSEAR MPC HIYHSDCIVPWLVQHN+CPVCR    H    
Sbjct: 131 QKHLRSDSHCPVCKDRFELGSEARKMPCNHIYHSDCIVPWLVQHNSCPVCR----HELPP 186

Query: 562 XXXXXXXXXXXXXXXXXXXXXXXXSMGTESDGDRNGRRNPFSFLWPFRTSNSNPGSHQHE 383
                                   S G E+  D  GRR+ +S LWPFR+SNS+  SH +E
Sbjct: 187 QGSSRGHSHQTSSSGNRSSSYSSNSNGRENGRDNQGRRSAWSLLWPFRSSNSS--SHHNE 244

Query: 382 SGGSNSASVPEDNNHPMTYSGWPFD 308
           +GGS+SA+V ED +    Y GWPFD
Sbjct: 245 TGGSSSATVHEDIHQQTGYHGWPFD 269


>ref|XP_003617180.1| Thioredoxin-related protein [Medicago truncatula]
           gi|355518515|gb|AET00139.1| Thioredoxin-related protein
           [Medicago truncatula]
          Length = 371

 Score =  157 bits (397), Expect = 2e-36
 Identities = 78/145 (53%), Positives = 92/145 (63%)
 Frame = -2

Query: 742 QKHLRRDSHCPVCKEQFELGSEARVMPCKHIYHSDCIVPWLVQHNTCPVCRLELLHPXXX 563
           Q HLR DSHCPVCKE+FELGSEAR MPC HIYHS+CIVPWLVQHN+CPVCR+EL      
Sbjct: 237 QAHLRSDSHCPVCKEKFELGSEAREMPCDHIYHSECIVPWLVQHNSCPVCRVEL------ 290

Query: 562 XXXXXXXXXXXXXXXXXXXXXXXXSMGTESDGDRNGRRNPFSFLWPFRTSNSNPGSHQHE 383
                                   S G ESD   NGRRNPFSFLWPFR+S+SN  ++Q+ 
Sbjct: 291 ---PPQGQMSSRGSSRSNSGGNGSSRGRESDRPNNGRRNPFSFLWPFRSSSSN--NNQYS 345

Query: 382 SGGSNSASVPEDNNHPMTYSGWPFD 308
             G +S+S   D N+   Y+GW +D
Sbjct: 346 ETGGSSSSTNADQNNGTRYNGWHYD 370


>ref|XP_003617179.1| Thioredoxin-related protein [Medicago truncatula]
           gi|355518514|gb|AET00138.1| Thioredoxin-related protein
           [Medicago truncatula]
          Length = 287

 Score =  157 bits (397), Expect = 2e-36
 Identities = 78/145 (53%), Positives = 92/145 (63%)
 Frame = -2

Query: 742 QKHLRRDSHCPVCKEQFELGSEARVMPCKHIYHSDCIVPWLVQHNTCPVCRLELLHPXXX 563
           Q HLR DSHCPVCKE+FELGSEAR MPC HIYHS+CIVPWLVQHN+CPVCR+EL      
Sbjct: 153 QAHLRSDSHCPVCKEKFELGSEAREMPCDHIYHSECIVPWLVQHNSCPVCRVEL------ 206

Query: 562 XXXXXXXXXXXXXXXXXXXXXXXXSMGTESDGDRNGRRNPFSFLWPFRTSNSNPGSHQHE 383
                                   S G ESD   NGRRNPFSFLWPFR+S+SN  ++Q+ 
Sbjct: 207 ---PPQGQMSSRGSSRSNSGGNGSSRGRESDRPNNGRRNPFSFLWPFRSSSSN--NNQYS 261

Query: 382 SGGSNSASVPEDNNHPMTYSGWPFD 308
             G +S+S   D N+   Y+GW +D
Sbjct: 262 ETGGSSSSTNADQNNGTRYNGWHYD 286


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