BLASTX nr result

ID: Dioscorea21_contig00013528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013528
         (870 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530166.1| conserved hypothetical protein [Ricinus comm...   114   3e-23
ref|XP_002309400.1| predicted protein [Populus trichocarpa] gi|2...    94   3e-17
emb|CAN79170.1| hypothetical protein VITISV_012166 [Vitis vinifera]    92   1e-16
ref|XP_002323401.1| predicted protein [Populus trichocarpa] gi|2...    92   2e-16
ref|NP_566393.1| uncharacterized protein [Arabidopsis thaliana] ...    91   3e-16

>ref|XP_002530166.1| conserved hypothetical protein [Ricinus communis]
           gi|223530327|gb|EEF32221.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 195

 Score =  114 bits (285), Expect = 3e-23
 Identities = 66/143 (46%), Positives = 78/143 (54%), Gaps = 8/143 (5%)
 Frame = +2

Query: 212 FQTHRLNPSXXXXXXXXXXXXGWQRCLSLKTGQIFYYKR-----MSRNNGKSPKLDLKLN 376
           FQ   L+ S            GWQ+ L+L+TG+I+Y K      MSR NG  PKLDLKLN
Sbjct: 43  FQYANLSCSYIELEEPFPLPLGWQKFLNLQTGEIYYTKNTRKKTMSRRNGNGPKLDLKLN 102

Query: 377 LSPP---PLRGNTSRAVRDGEDXXXXXXXXXXXXXXXXXXXXXXXEATSMVLAGCPRCLM 547
           LSPP   P   + +R+                             EATSMVL GCPRCLM
Sbjct: 103 LSPPRADPRVESPNRSATVSPTSPPSSCVSSELNQDDTLRYSNSPEATSMVLVGCPRCLM 162

Query: 548 YVMLSEEDPRCPKCKNPVLLDFL 616
           YVMLSE+DP+CPKCK+ VLLDFL
Sbjct: 163 YVMLSEDDPKCPKCKSTVLLDFL 185


>ref|XP_002309400.1| predicted protein [Populus trichocarpa] gi|222855376|gb|EEE92923.1|
           predicted protein [Populus trichocarpa]
          Length = 104

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 52/99 (52%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
 Frame = +2

Query: 329 MSRNNGKSPKLDLKLNLSPP---PLRGNTSRAVRDGEDXXXXXXXXXXXXXXXXXXXXXX 499
           MSR NG  PKLDLKLNLSPP   P   +  R+                            
Sbjct: 1   MSRRNGSLPKLDLKLNLSPPRVNPRVESPGRSATVSPTSPPSSCVSSERSHDDALRYSSS 60

Query: 500 XEATSMVLAGCPRCLMYVMLSEEDPRCPKCKNPVLLDFL 616
            EATSMVL GCPRCLMYVMLSE DP+CPKCK+ VLLDFL
Sbjct: 61  PEATSMVLVGCPRCLMYVMLSENDPKCPKCKSTVLLDFL 99


>emb|CAN79170.1| hypothetical protein VITISV_012166 [Vitis vinifera]
          Length = 281

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 53/100 (53%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
 Frame = +2

Query: 326 RMSRNNGKSPKLDLKLNLSPPPLRGNT---SRAVRDGEDXXXXXXXXXXXXXXXXXXXXX 496
           RMSR NG  PKLDLKLNLSPP    +    SR+                           
Sbjct: 161 RMSRRNG--PKLDLKLNLSPPRANRHAESPSRSATLSPTSPPSSCVSSELNQDETLRYSN 218

Query: 497 XXEATSMVLAGCPRCLMYVMLSEEDPRCPKCKNPVLLDFL 616
             EATSMVL GCPRCLMYVMLSE+DP+CPKCK+ VLLDFL
Sbjct: 219 SPEATSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFL 258


>ref|XP_002323401.1| predicted protein [Populus trichocarpa] gi|222868031|gb|EEF05162.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 51/99 (51%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
 Frame = +2

Query: 329 MSRNNGKSPKLDLKLNLSPP---PLRGNTSRAVRDGEDXXXXXXXXXXXXXXXXXXXXXX 499
           MSR NG  PKLDLKLNLSPP   P   +  R+                            
Sbjct: 1   MSRRNGSLPKLDLKLNLSPPRVNPRVESPGRSATVSPTSPPSSCVSSEMSQDDTLRYSSS 60

Query: 500 XEATSMVLAGCPRCLMYVMLSEEDPRCPKCKNPVLLDFL 616
            EATSMVL GCPRCLMYVMLSE DP+CPKCK+  LLDFL
Sbjct: 61  PEATSMVLVGCPRCLMYVMLSENDPKCPKCKSTWLLDFL 99


>ref|NP_566393.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6041814|gb|AAF02129.1|AC009918_1 hypothetical protein
           [Arabidopsis thaliana] gi|21553924|gb|AAM63007.1|
           unknown [Arabidopsis thaliana]
           gi|26450081|dbj|BAC42160.1| unknown protein [Arabidopsis
           thaliana] gi|28827726|gb|AAO50707.1| unknown protein
           [Arabidopsis thaliana] gi|332641551|gb|AEE75072.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 117

 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 48/97 (49%), Positives = 56/97 (57%)
 Frame = +2

Query: 329 MSRNNGKSPKLDLKLNLSPPPLRGNTSRAVRDGEDXXXXXXXXXXXXXXXXXXXXXXXEA 508
           MSR N   PKL+L+LNLSPPP + +    VR                             
Sbjct: 1   MSRRNKNGPKLELRLNLSPPPSQASQMSLVRSPN---RSNTTSPSSCVSSETNQEENETI 57

Query: 509 TSMVLAGCPRCLMYVMLSEEDPRCPKCKNPVLLDFLQ 619
           TSMVL GCPRCLMYVMLS++DP+CPKCK+ VLLDFLQ
Sbjct: 58  TSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQ 94


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