BLASTX nr result

ID: Dioscorea21_contig00013500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013500
         (789 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX73300.1| putative pollen specific LIM domain-containing pr...   246   4e-63
ref|XP_004138126.1| PREDICTED: pollen-specific protein SF3-like ...   245   7e-63
ref|XP_002511450.1| Pollen-specific protein SF3, putative [Ricin...   245   7e-63
gb|ABK23670.1| unknown [Picea sitchensis] gi|116791757|gb|ABK260...   243   4e-62
gb|AAX95760.2| Pollen-specific protein SF3, putative [Solanum ly...   240   3e-61

>gb|AAX73300.1| putative pollen specific LIM domain-containing protein [Solanum
           lycopersicum]
          Length = 179

 Score =  246 bits (628), Expect = 4e-63
 Identities = 113/143 (79%), Positives = 127/143 (88%)
 Frame = +3

Query: 360 AFLGTTQKCKACEKTVYPVEQLTADNKAYHRACFRCHHCKGTLKFSNYSSFEGVLYCKPH 539
           +F GTTQKCKACEKTVY V+QLTADNK YH+ACFRCHHCKGTLK SNY+SFEGVLYC+PH
Sbjct: 3   SFGGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPH 62

Query: 540 YDQLFKMTGSLDKSFEGAPRAKPERANGHEVYVNNRVSSVFVGTQDKCVICKKTVYPIEK 719
           +DQLFKMTGSLDKSFEGAP+   ER+   +   N++VSS+F GTQDKCV CKKTVYP+EK
Sbjct: 63  FDQLFKMTGSLDKSFEGAPKTVRERS--ADQGSNSKVSSLFGGTQDKCVACKKTVYPLEK 120

Query: 720 VAVDGQSYHRPCFKCAHGGCVIS 788
           VAVDG SYHRPCFKC+HGGCVIS
Sbjct: 121 VAVDGTSYHRPCFKCSHGGCVIS 143



 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 34/72 (47%), Positives = 46/72 (63%)
 Frame = +3

Query: 363 FLGTTQKCKACEKTVYPVEQLTADNKAYHRACFRCHHCKGTLKFSNYSSFEGVLYCKPHY 542
           F GT  KC AC+KTVYP+E++  D  +YHR CF+C H    +  SNY + E  LYC+ H+
Sbjct: 101 FGGTQDKCVACKKTVYPLEKVAVDGTSYHRPCFKCSHGGCVISPSNYVAHEHRLYCRHHH 160

Query: 543 DQLFKMTGSLDK 578
            QLFK  G+  +
Sbjct: 161 TQLFKERGNFSQ 172


>ref|XP_004138126.1| PREDICTED: pollen-specific protein SF3-like [Cucumis sativus]
           gi|449477390|ref|XP_004155009.1| PREDICTED:
           pollen-specific protein SF3-like [Cucumis sativus]
          Length = 186

 Score =  245 bits (626), Expect = 7e-63
 Identities = 110/145 (75%), Positives = 125/145 (86%)
 Frame = +3

Query: 354 KMAFLGTTQKCKACEKTVYPVEQLTADNKAYHRACFRCHHCKGTLKFSNYSSFEGVLYCK 533
           KMAFLGTTQKCKAC+KTVY V+QLTADNK YH+ACFRCHHCK TLK  NYSSFEGVLYCK
Sbjct: 2   KMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCK 61

Query: 534 PHYDQLFKMTGSLDKSFEGAPRAKPERANGHEVYVNNRVSSVFVGTQDKCVICKKTVYPI 713
           PH+DQLFKMTGSL+KSFE  PR      + ++V  N+++SS+F GTQDKCV CKKTVYPI
Sbjct: 62  PHFDQLFKMTGSLEKSFEATPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYPI 121

Query: 714 EKVAVDGQSYHRPCFKCAHGGCVIS 788
           EKVAVD +SYHR CF+C+HGGCVIS
Sbjct: 122 EKVAVDSKSYHRACFRCSHGGCVIS 146



 Score = 86.3 bits (212), Expect = 7e-15
 Identities = 40/78 (51%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
 Frame = +3

Query: 363 FLGTTQKCKACEKTVYPVEQLTADNKAYHRACFRCHHCKGTLKFSNYSSFEGVLYCKPHY 542
           F GT  KC  C+KTVYP+E++  D+K+YHRACFRC H    +  SNY + E  LYC+ H+
Sbjct: 104 FAGTQDKCVTCKKTVYPIEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHH 163

Query: 543 DQLFKMTGS---LDKSFE 587
           +QLFK  G+   LDK  E
Sbjct: 164 NQLFKQKGNFSQLDKHEE 181


>ref|XP_002511450.1| Pollen-specific protein SF3, putative [Ricinus communis]
           gi|223550565|gb|EEF52052.1| Pollen-specific protein SF3,
           putative [Ricinus communis]
          Length = 190

 Score =  245 bits (626), Expect = 7e-63
 Identities = 111/142 (78%), Positives = 121/142 (85%)
 Frame = +3

Query: 363 FLGTTQKCKACEKTVYPVEQLTADNKAYHRACFRCHHCKGTLKFSNYSSFEGVLYCKPHY 542
           F GTTQKCKACEKTVY V+QLTADNK YH+ACFRCHHCKGTLK SNYSSFEGVLYCKPH+
Sbjct: 4   FAGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYSSFEGVLYCKPHF 63

Query: 543 DQLFKMTGSLDKSFEGAPRAKPERANGHEVYVNNRVSSVFVGTQDKCVICKKTVYPIEKV 722
           DQLFKMTGSLDKSFEG P+      +  +   N+RVSS+F GTQDKCV CKKTVYPIEKV
Sbjct: 64  DQLFKMTGSLDKSFEGTPKTVRVDRSADQFNSNSRVSSMFAGTQDKCVACKKTVYPIEKV 123

Query: 723 AVDGQSYHRPCFKCAHGGCVIS 788
           AVDG SYH+ CF+C HGGCVIS
Sbjct: 124 AVDGTSYHKACFRCTHGGCVIS 145



 Score = 83.2 bits (204), Expect = 6e-14
 Identities = 35/72 (48%), Positives = 48/72 (66%)
 Frame = +3

Query: 363 FLGTTQKCKACEKTVYPVEQLTADNKAYHRACFRCHHCKGTLKFSNYSSFEGVLYCKPHY 542
           F GT  KC AC+KTVYP+E++  D  +YH+ACFRC H    +  SNY + E  LYC+ H+
Sbjct: 103 FAGTQDKCVACKKTVYPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEQRLYCRHHH 162

Query: 543 DQLFKMTGSLDK 578
           +QLFK  G+  +
Sbjct: 163 NQLFKQKGNFSQ 174


>gb|ABK23670.1| unknown [Picea sitchensis] gi|116791757|gb|ABK26097.1| unknown
           [Picea sitchensis]
          Length = 191

 Score =  243 bits (619), Expect = 4e-62
 Identities = 112/145 (77%), Positives = 122/145 (84%), Gaps = 1/145 (0%)
 Frame = +3

Query: 357 MAFLGTTQKCKACEKTVYPVEQLTADNKAYHRACFRCHHCKGTLKFSNYSSFEGVLYCKP 536
           MAF GTTQKCKACEKTVY V+QLTADN  YH++CFRCHHC GTLK SNYSSFEGVLYCKP
Sbjct: 1   MAFAGTTQKCKACEKTVYLVDQLTADNSVYHKSCFRCHHCNGTLKLSNYSSFEGVLYCKP 60

Query: 537 HYDQLFKMTGSLDKSFEGAPRA-KPERANGHEVYVNNRVSSVFVGTQDKCVICKKTVYPI 713
           H+DQLFK TGSLDKSFE  PRA + ++   +E    NRVS++F GTQDKCV C KTVYPI
Sbjct: 61  HFDQLFKRTGSLDKSFEAIPRASRNDKTQENESKTPNRVSTMFSGTQDKCVACGKTVYPI 120

Query: 714 EKVAVDGQSYHRPCFKCAHGGCVIS 788
           EKVAVDG SYHRPCFKC HGGCVIS
Sbjct: 121 EKVAVDGTSYHRPCFKCCHGGCVIS 145



 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 36/78 (46%), Positives = 48/78 (61%)
 Frame = +3

Query: 363 FLGTTQKCKACEKTVYPVEQLTADNKAYHRACFRCHHCKGTLKFSNYSSFEGVLYCKPHY 542
           F GT  KC AC KTVYP+E++  D  +YHR CF+C H    +  SNY + EG LYC+ H 
Sbjct: 103 FSGTQDKCVACGKTVYPIEKVAVDGTSYHRPCFKCCHGGCVISPSNYVAHEGRLYCRHHS 162

Query: 543 DQLFKMTGSLDKSFEGAP 596
            QLF+  G+  +  +G P
Sbjct: 163 SQLFREKGNFSQLAKGTP 180


>gb|AAX95760.2| Pollen-specific protein SF3, putative [Solanum lycopersicum]
          Length = 184

 Score =  240 bits (612), Expect = 3e-61
 Identities = 113/148 (76%), Positives = 127/148 (85%), Gaps = 5/148 (3%)
 Frame = +3

Query: 360 AFLGTTQKCKACEKTVYPVEQLTADNKAYHRACFRCHHCKGTLKFSNYSSFEGVLYCKPH 539
           +F GTTQKCKACEKTVY V+QLTADNK YH+ACFRCHHCKGTLK SNY+SFEGVLYC+PH
Sbjct: 3   SFGGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPH 62

Query: 540 YDQLFKMTGSLDKSFEGAPRAKPERANGHEVYVNNRVSSVFVGTQDKCVICKKTVYPIEK 719
           +DQLFKMTGSLDKSFEGAP+   ER+   +   N++VSS+F GTQDKCV CKKTVYP+EK
Sbjct: 63  FDQLFKMTGSLDKSFEGAPKTVRERS--ADQGSNSKVSSLFGGTQDKCVACKKTVYPLEK 120

Query: 720 -----VAVDGQSYHRPCFKCAHGGCVIS 788
                VAVDG SYHRPCFKC+HGGCVIS
Sbjct: 121 TRAEQVAVDGTSYHRPCFKCSHGGCVIS 148



 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
 Frame = +3

Query: 363 FLGTTQKCKACEKTVYPVE-----QLTADNKAYHRACFRCHHCKGTLKFSNYSSFEGVLY 527
           F GT  KC AC+KTVYP+E     Q+  D  +YHR CF+C H    +  SNY + E  LY
Sbjct: 101 FGGTQDKCVACKKTVYPLEKTRAEQVAVDGTSYHRPCFKCSHGGCVISPSNYVAHEHRLY 160

Query: 528 CKPHYDQLFKMTGSLDK 578
           C+ H+ QLFK  G+  +
Sbjct: 161 CRHHHTQLFKERGNFSQ 177


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