BLASTX nr result

ID: Dioscorea21_contig00013471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013471
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524811.1| Speckle-type POZ protein, putative [Ricinus ...   183   2e-44
ref|XP_002304049.1| predicted protein [Populus trichocarpa] gi|2...   183   2e-44
ref|XP_002271534.2| PREDICTED: BTB/POZ and MATH domain-containin...   182   6e-44
ref|NP_001061016.2| Os08g0154700 [Oryza sativa Japonica Group] g...   181   8e-44
gb|ABK93861.1| unknown [Populus trichocarpa]                          181   8e-44

>ref|XP_002524811.1| Speckle-type POZ protein, putative [Ricinus communis]
           gi|223535995|gb|EEF37654.1| Speckle-type POZ protein,
           putative [Ricinus communis]
          Length = 500

 Score =  183 bits (465), Expect = 2e-44
 Identities = 88/94 (93%), Positives = 93/94 (98%)
 Frame = -2

Query: 602 GKMLFFSYFKELVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVR 423
           G+ LFFSYFK+LVG+EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVR
Sbjct: 406 GRRLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVR 465

Query: 422 NCFIRGSVVRYVQLPPDGVDIDILHDATRREARG 321
           NCFIRGSVVRYVQLPP+GVDID+LHDATRREARG
Sbjct: 466 NCFIRGSVVRYVQLPPEGVDIDLLHDATRREARG 499


>ref|XP_002304049.1| predicted protein [Populus trichocarpa]
           gi|224118384|ref|XP_002331469.1| predicted protein
           [Populus trichocarpa] gi|118484877|gb|ABK94305.1|
           unknown [Populus trichocarpa]
           gi|222841481|gb|EEE79028.1| predicted protein [Populus
           trichocarpa] gi|222873547|gb|EEF10678.1| predicted
           protein [Populus trichocarpa]
          Length = 93

 Score =  183 bits (465), Expect = 2e-44
 Identities = 88/92 (95%), Positives = 92/92 (100%)
 Frame = -2

Query: 596 MLFFSYFKELVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 417
           MLFFSYFK+LVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
Sbjct: 1   MLFFSYFKDLVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60

Query: 416 FIRGSVVRYVQLPPDGVDIDILHDATRREARG 321
           FIRGSVVRYVQLPP+GVD+D+LHDATRREARG
Sbjct: 61  FIRGSVVRYVQLPPEGVDVDLLHDATRREARG 92


>ref|XP_002271534.2| PREDICTED: BTB/POZ and MATH domain-containing protein 2-like [Vitis
           vinifera]
          Length = 489

 Score =  182 bits (461), Expect = 6e-44
 Identities = 87/94 (92%), Positives = 93/94 (98%)
 Frame = -2

Query: 602 GKMLFFSYFKELVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVR 423
           G+ LFFSYFK+LVG+EVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVR
Sbjct: 395 GRRLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVR 454

Query: 422 NCFIRGSVVRYVQLPPDGVDIDILHDATRREARG 321
           NCFIRGSVVRYVQLPP+GVDI++LHDATRREARG
Sbjct: 455 NCFIRGSVVRYVQLPPEGVDIELLHDATRREARG 488


>ref|NP_001061016.2| Os08g0154700 [Oryza sativa Japonica Group]
           gi|242078209|ref|XP_002443873.1| hypothetical protein
           SORBIDRAFT_07g003620 [Sorghum bicolor]
           gi|357145002|ref|XP_003573488.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm2-like [Brachypodium
           distachyon] gi|195656753|gb|ACG47844.1| snRNP core Sm
           protein Sm-X5-like protein [Zea mays]
           gi|215769192|dbj|BAH01421.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|241940223|gb|EES13368.1| hypothetical protein
           SORBIDRAFT_07g003620 [Sorghum bicolor]
           gi|255678156|dbj|BAF22930.2| Os08g0154700 [Oryza sativa
           Japonica Group] gi|326493970|dbj|BAJ85447.1| predicted
           protein [Hordeum vulgare subsp. vulgare]
           gi|326512672|dbj|BAJ99691.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|326530750|dbj|BAK01173.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
           gi|413921285|gb|AFW61217.1| snRNP core Sm protein
           Sm-X5-like protein [Zea mays]
          Length = 93

 Score =  181 bits (460), Expect = 8e-44
 Identities = 90/92 (97%), Positives = 90/92 (97%)
 Frame = -2

Query: 596 MLFFSYFKELVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 417
           MLFFSYFKELVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
Sbjct: 1   MLFFSYFKELVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60

Query: 416 FIRGSVVRYVQLPPDGVDIDILHDATRREARG 321
           FIRGSVVRYV LP DGVDIDILHDATRREARG
Sbjct: 61  FIRGSVVRYVLLPQDGVDIDILHDATRREARG 92


>gb|ABK93861.1| unknown [Populus trichocarpa]
          Length = 93

 Score =  181 bits (460), Expect = 8e-44
 Identities = 87/92 (94%), Positives = 91/92 (98%)
 Frame = -2

Query: 596 MLFFSYFKELVGKEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 417
           MLFFSYFK+LVGKEVTVELKNDLAIRG LHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
Sbjct: 1   MLFFSYFKDLVGKEVTVELKNDLAIRGNLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC 60

Query: 416 FIRGSVVRYVQLPPDGVDIDILHDATRREARG 321
           FIRGSVVRYVQLPP+GVD+D+LHDATRREARG
Sbjct: 61  FIRGSVVRYVQLPPEGVDVDLLHDATRREARG 92


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