BLASTX nr result

ID: Dioscorea21_contig00013452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013452
         (840 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303086.1| predicted protein [Populus trichocarpa] gi|1...   137   2e-30
ref|XP_002264856.1| PREDICTED: uncharacterized protein LOC100256...   134   3e-29
emb|CAN75300.1| hypothetical protein VITISV_008677 [Vitis vinifera]   129   6e-28
ref|XP_002521134.1| conserved hypothetical protein [Ricinus comm...   125   1e-26
ref|XP_004152015.1| PREDICTED: uncharacterized protein LOC101207...   120   3e-25

>ref|XP_002303086.1| predicted protein [Populus trichocarpa] gi|118489453|gb|ABK96529.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222844812|gb|EEE82359.1| predicted protein [Populus
           trichocarpa]
          Length = 172

 Score =  137 bits (346), Expect = 2e-30
 Identities = 71/110 (64%), Positives = 83/110 (75%)
 Frame = +1

Query: 199 IVAAQSNWLRVIQTVWKVSKDGIEAGTNLMPGIVPRPIARIAVTFIGGAIVLFVFKSFLS 378
           + AAQSN+L+V+QTVWKV KDGIE GTNL+P  VPRPIAR+AVTF+  A+ LF+ KSFLS
Sbjct: 65  VFAAQSNFLKVVQTVWKVGKDGIETGTNLVPNSVPRPIARVAVTFVVLAVSLFLLKSFLS 124

Query: 379 TLFFALAVMGLVYFAFIAMNSDEVSKGAGXXXXXXXXXXXXARRIMEKYK 528
           T+FFALA MGLVYF FIA+N D+  KG G            ARRIMEKYK
Sbjct: 125 TVFFALATMGLVYFTFIALNKDQGPKGGG--GTTLEDPEEEARRIMEKYK 172


>ref|XP_002264856.1| PREDICTED: uncharacterized protein LOC100256241 [Vitis vinifera]
           gi|297744291|emb|CBI37261.3| unnamed protein product
           [Vitis vinifera]
          Length = 175

 Score =  134 bits (336), Expect = 3e-29
 Identities = 70/116 (60%), Positives = 83/116 (71%), Gaps = 6/116 (5%)
 Frame = +1

Query: 199 IVAAQSNWLRVIQTVWKVSKDGIEAGTNLMPGIVPRPIARIAVTFIGGAIVLFVFKSFLS 378
           + A+QSN+LRVIQTVWK+ KDGIEAGTNL+P  VPRPIARI+VT +  A+ LFVFKSFLS
Sbjct: 60  VCASQSNFLRVIQTVWKIGKDGIEAGTNLVPESVPRPIARISVTVVTLAVALFVFKSFLS 119

Query: 379 TLFFALAVMGLVYFAFIAMNSDEVSKGAG------XXXXXXXXXXXXARRIMEKYK 528
           T FF LA+MGL+YF FIA+N D+  +G G                  ARRIMEKYK
Sbjct: 120 TAFFVLAMMGLIYFTFIALNKDDGPRGGGGGGGVDGGTPSTEDSLEEARRIMEKYK 175


>emb|CAN75300.1| hypothetical protein VITISV_008677 [Vitis vinifera]
          Length = 221

 Score =  129 bits (325), Expect = 6e-28
 Identities = 68/113 (60%), Positives = 81/113 (71%), Gaps = 5/113 (4%)
 Frame = +1

Query: 199 IVAAQSNWLRVIQTVWKVSKDGIEAGTNLMPGIVPRPIARIAVTFIGGAIVLFVFKSFLS 378
           + A+QSN+LRVIQTVWK+ KDGIEAGTNL+P  VPRPIARI+VT +  A+ LFVFKSFLS
Sbjct: 60  VCASQSNFLRVIQTVWKIGKDGIEAGTNLVPESVPRPIARISVTVVTLAVALFVFKSFLS 119

Query: 379 TLFFALAVMGLVYFAFIAMNSDEVSKGAG-----XXXXXXXXXXXXARRIMEK 522
           T FF LA+MGL+YF FIA+N D+  +G G                 ARRIMEK
Sbjct: 120 TAFFVLAMMGLIYFTFIALNKDDGPRGGGGGGVDGGTPSTEDSLEEARRIMEK 172


>ref|XP_002521134.1| conserved hypothetical protein [Ricinus communis]
           gi|223539703|gb|EEF41285.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 177

 Score =  125 bits (314), Expect = 1e-26
 Identities = 66/111 (59%), Positives = 77/111 (69%), Gaps = 1/111 (0%)
 Frame = +1

Query: 199 IVAAQSNWLRVIQTVWKVSKDGIEAGTNLMPGIVPRPIARIAVTFIGGAIVLFVFKSFLS 378
           I A QSN+L+V+QT WKV KDGI+AGT L+P  VPRPIARI+VT +  ++ LFV KS LS
Sbjct: 67  IFAVQSNFLKVVQTAWKVGKDGIDAGTRLVPDSVPRPIARISVTIVALSVSLFVLKSVLS 126

Query: 379 TLFFALAVMGLVYFAFIAMNSDEVSKGAG-XXXXXXXXXXXXARRIMEKYK 528
           T FFALA MG VYF FIA+N D+  KG G             ARRIMEKYK
Sbjct: 127 TAFFALATMGFVYFVFIALNKDQRPKGGGTGSTTSSEDPLEEARRIMEKYK 177


>ref|XP_004152015.1| PREDICTED: uncharacterized protein LOC101207451 [Cucumis sativus]
           gi|449507470|ref|XP_004163041.1| PREDICTED:
           uncharacterized LOC101207451 [Cucumis sativus]
          Length = 177

 Score =  120 bits (302), Expect = 3e-25
 Identities = 64/113 (56%), Positives = 77/113 (68%), Gaps = 3/113 (2%)
 Frame = +1

Query: 199 IVAAQSNWLRVIQTVWKVSKDGIEAGTNLMPGIVPRPIARIAVTFIGGAIVLFVFKSFLS 378
           + AAQ+N+LRV QTVWK+ KDGIEAGT+L+P  VPRPIARI+V  +   I LF+FKS LS
Sbjct: 65  VYAAQNNFLRVFQTVWKIGKDGIEAGTDLVPDSVPRPIARISVGIVALTIGLFLFKSVLS 124

Query: 379 TLFFALAVMGLVYFAFIAMNSDEVSKGAG---XXXXXXXXXXXXARRIMEKYK 528
           T  F LA+MG +YF FIA+N DE  +G G               ARRIMEKYK
Sbjct: 125 TALFVLAMMGAIYFIFIALNKDEGPRGGGGSSSSPTSTEETLEEARRIMEKYK 177


Top