BLASTX nr result

ID: Dioscorea21_contig00013417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013417
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ40864.1| tetrahydroberberine oxidase [Coptis japonica]          85   7e-15
gb|AFW60741.1| putative FAD-binding Berberine family protein [Ze...    81   8e-14
ref|XP_002330608.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
dbj|BAM74079.1| hypothetical protein [Cannabis sativa]                 79   3e-13
ref|XP_003571166.1| PREDICTED: reticuline oxidase-like protein-l...    79   4e-13

>dbj|BAJ40864.1| tetrahydroberberine oxidase [Coptis japonica]
          Length = 540

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 43/80 (53%), Positives = 57/80 (71%)
 Frame = +2

Query: 20  FLQCFISKTNSTNNIYTPNTNSYTNVLLSSVQNTRFITSNTTTKPSFIITAATFSDVQAS 199
           FLQC   ++NS+  IY P++ SYT++L +S+ N RFI S TT KP+FIIT    S VQA+
Sbjct: 35  FLQCLDLRSNSSIPIYNPSSTSYTSILHASIYNLRFI-SPTTPKPNFIITPMRESHVQAT 93

Query: 200 ITCSRLAGLRVRVRSGGHDY 259
           + CSR  GL +R RSGGHD+
Sbjct: 94  VVCSREHGLLIRTRSGGHDF 113


>gb|AFW60741.1| putative FAD-binding Berberine family protein [Zea mays]
          Length = 543

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/86 (48%), Positives = 60/86 (69%)
 Frame = +2

Query: 2   TTTSSKFLQCFISKTNSTNNIYTPNTNSYTNVLLSSVQNTRFITSNTTTKPSFIITAATF 181
           + +S  FLQC +S    +  +Y  +++S+T+VL SSVQN +F+T NTT +P  IITA+  
Sbjct: 42  SASSDSFLQC-LSAMMPSELVYQQSSSSFTSVLQSSVQNPKFVT-NTTVRPLCIITASDV 99

Query: 182 SDVQASITCSRLAGLRVRVRSGGHDY 259
           S VQ ++ C R  G+R+RVRSGGHDY
Sbjct: 100 SHVQTAVRCGRWNGVRLRVRSGGHDY 125


>ref|XP_002330608.1| predicted protein [Populus trichocarpa] gi|222872166|gb|EEF09297.1|
           predicted protein [Populus trichocarpa]
          Length = 535

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
 Frame = +2

Query: 8   TSSKFLQCFISKTNSTNN----IYTPNTNSYTNVLLSSVQNTRFITSNTTTKPSFIITAA 175
           T   FLQC    +  +N+    +YTPN +SY +VL  S+QN+RF T+  T KP  I+T  
Sbjct: 29  THEDFLQCLSLYSEDSNSFSKLVYTPNNSSYLHVLQGSIQNSRFNTT-ATPKPPVIVTPM 87

Query: 176 TFSDVQASITCSRLAGLRVRVRSGGHDY 259
             S +QA+I CS+  G+ VR+RSGGHDY
Sbjct: 88  NVSHIQATIFCSQKHGMNVRIRSGGHDY 115


>dbj|BAM74079.1| hypothetical protein [Cannabis sativa]
          Length = 543

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/86 (50%), Positives = 55/86 (63%), Gaps = 6/86 (6%)
 Frame = +2

Query: 20  FLQCFISKTNSTNN------IYTPNTNSYTNVLLSSVQNTRFITSNTTTKPSFIITAATF 181
           FLQCF    N+ NN      I+TPN  SY +VL S++QN RF  S +T KP  IIT +  
Sbjct: 34  FLQCFSKHINNNNNKSIVKLIHTPNDPSYISVLNSTIQNLRF-ASPSTPKPLVIITPSNT 92

Query: 182 SDVQASITCSRLAGLRVRVRSGGHDY 259
           S VQA + CS+  GL++R RSGGHD+
Sbjct: 93  SHVQACVLCSKKYGLQIRTRSGGHDF 118


>ref|XP_003571166.1| PREDICTED: reticuline oxidase-like protein-like [Brachypodium
           distachyon]
          Length = 542

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/84 (46%), Positives = 59/84 (70%)
 Frame = +2

Query: 8   TSSKFLQCFISKTNSTNNIYTPNTNSYTNVLLSSVQNTRFITSNTTTKPSFIITAATFSD 187
           +S  FLQC +S+T   N ++T ++ S+T++L+SS++N +F T  TT +P  I+T    S 
Sbjct: 28  SSDDFLQC-LSETMPNNLVFTQSSPSFTSILVSSIRNPKFFTP-TTVRPLCIVTPTNASH 85

Query: 188 VQASITCSRLAGLRVRVRSGGHDY 259
           VQA++ C R  G+R+RVRSGGHDY
Sbjct: 86  VQAAVICGRRHGVRLRVRSGGHDY 109


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