BLASTX nr result
ID: Dioscorea21_contig00013417
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00013417 (260 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAJ40864.1| tetrahydroberberine oxidase [Coptis japonica] 85 7e-15 gb|AFW60741.1| putative FAD-binding Berberine family protein [Ze... 81 8e-14 ref|XP_002330608.1| predicted protein [Populus trichocarpa] gi|2... 80 2e-13 dbj|BAM74079.1| hypothetical protein [Cannabis sativa] 79 3e-13 ref|XP_003571166.1| PREDICTED: reticuline oxidase-like protein-l... 79 4e-13 >dbj|BAJ40864.1| tetrahydroberberine oxidase [Coptis japonica] Length = 540 Score = 84.7 bits (208), Expect = 7e-15 Identities = 43/80 (53%), Positives = 57/80 (71%) Frame = +2 Query: 20 FLQCFISKTNSTNNIYTPNTNSYTNVLLSSVQNTRFITSNTTTKPSFIITAATFSDVQAS 199 FLQC ++NS+ IY P++ SYT++L +S+ N RFI S TT KP+FIIT S VQA+ Sbjct: 35 FLQCLDLRSNSSIPIYNPSSTSYTSILHASIYNLRFI-SPTTPKPNFIITPMRESHVQAT 93 Query: 200 ITCSRLAGLRVRVRSGGHDY 259 + CSR GL +R RSGGHD+ Sbjct: 94 VVCSREHGLLIRTRSGGHDF 113 >gb|AFW60741.1| putative FAD-binding Berberine family protein [Zea mays] Length = 543 Score = 81.3 bits (199), Expect = 8e-14 Identities = 42/86 (48%), Positives = 60/86 (69%) Frame = +2 Query: 2 TTTSSKFLQCFISKTNSTNNIYTPNTNSYTNVLLSSVQNTRFITSNTTTKPSFIITAATF 181 + +S FLQC +S + +Y +++S+T+VL SSVQN +F+T NTT +P IITA+ Sbjct: 42 SASSDSFLQC-LSAMMPSELVYQQSSSSFTSVLQSSVQNPKFVT-NTTVRPLCIITASDV 99 Query: 182 SDVQASITCSRLAGLRVRVRSGGHDY 259 S VQ ++ C R G+R+RVRSGGHDY Sbjct: 100 SHVQTAVRCGRWNGVRLRVRSGGHDY 125 >ref|XP_002330608.1| predicted protein [Populus trichocarpa] gi|222872166|gb|EEF09297.1| predicted protein [Populus trichocarpa] Length = 535 Score = 79.7 bits (195), Expect = 2e-13 Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 4/88 (4%) Frame = +2 Query: 8 TSSKFLQCFISKTNSTNN----IYTPNTNSYTNVLLSSVQNTRFITSNTTTKPSFIITAA 175 T FLQC + +N+ +YTPN +SY +VL S+QN+RF T+ T KP I+T Sbjct: 29 THEDFLQCLSLYSEDSNSFSKLVYTPNNSSYLHVLQGSIQNSRFNTT-ATPKPPVIVTPM 87 Query: 176 TFSDVQASITCSRLAGLRVRVRSGGHDY 259 S +QA+I CS+ G+ VR+RSGGHDY Sbjct: 88 NVSHIQATIFCSQKHGMNVRIRSGGHDY 115 >dbj|BAM74079.1| hypothetical protein [Cannabis sativa] Length = 543 Score = 79.3 bits (194), Expect = 3e-13 Identities = 43/86 (50%), Positives = 55/86 (63%), Gaps = 6/86 (6%) Frame = +2 Query: 20 FLQCFISKTNSTNN------IYTPNTNSYTNVLLSSVQNTRFITSNTTTKPSFIITAATF 181 FLQCF N+ NN I+TPN SY +VL S++QN RF S +T KP IIT + Sbjct: 34 FLQCFSKHINNNNNKSIVKLIHTPNDPSYISVLNSTIQNLRF-ASPSTPKPLVIITPSNT 92 Query: 182 SDVQASITCSRLAGLRVRVRSGGHDY 259 S VQA + CS+ GL++R RSGGHD+ Sbjct: 93 SHVQACVLCSKKYGLQIRTRSGGHDF 118 >ref|XP_003571166.1| PREDICTED: reticuline oxidase-like protein-like [Brachypodium distachyon] Length = 542 Score = 79.0 bits (193), Expect = 4e-13 Identities = 39/84 (46%), Positives = 59/84 (70%) Frame = +2 Query: 8 TSSKFLQCFISKTNSTNNIYTPNTNSYTNVLLSSVQNTRFITSNTTTKPSFIITAATFSD 187 +S FLQC +S+T N ++T ++ S+T++L+SS++N +F T TT +P I+T S Sbjct: 28 SSDDFLQC-LSETMPNNLVFTQSSPSFTSILVSSIRNPKFFTP-TTVRPLCIVTPTNASH 85 Query: 188 VQASITCSRLAGLRVRVRSGGHDY 259 VQA++ C R G+R+RVRSGGHDY Sbjct: 86 VQAAVICGRRHGVRLRVRSGGHDY 109