BLASTX nr result

ID: Dioscorea21_contig00013390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013390
         (1159 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138872.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   364   3e-98
ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g1...   356   5e-96
emb|CBI20932.3| unnamed protein product [Vitis vinifera]              356   5e-96
ref|XP_002309588.1| predicted protein [Populus trichocarpa] gi|2...   355   9e-96
gb|EAY87799.1| hypothetical protein OsI_09219 [Oryza sativa Indi...   353   6e-95

>ref|XP_004138872.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
            sativus] gi|449499624|ref|XP_004160867.1| PREDICTED: E3
            ubiquitin-protein ligase At4g11680-like [Cucumis sativus]
          Length = 424

 Score =  364 bits (934), Expect = 3e-98
 Identities = 195/381 (51%), Positives = 246/381 (64%), Gaps = 4/381 (1%)
 Frame = +1

Query: 19   EHIIDITRDRVGSASDL-HGRNNNELEESDYDDRSSTIVRAHNGQPTSAS---DSRNASS 186
            EHIIDIT       S L HGR++N L  S  +DR S+  R    QP+++S   +SRN+S 
Sbjct: 31   EHIIDITGAGDSGPSGLPHGRSSNGLNSSQPEDRPSSSTRVPLSQPSTSSTGSNSRNSSF 90

Query: 187  GRRRDSHRLQRGSPLNSGLWISVELVVSISQIIAAITVVSLSRHEKPETPLFAWIIGYTI 366
             RR D+ R  R SPLNSGLWIS+EL++++SQIIAAI V+SLS++EKP  PLFAWI+GY  
Sbjct: 91   IRRGDARR--RRSPLNSGLWISIELLLTMSQIIAAIIVLSLSKNEKPRAPLFAWIVGYAS 148

Query: 367  GCVASLPHLYWRYIHRNTPGLTQESAHLHQRSQVITTAPTPYTIMSVNQVLEGEHLHRTG 546
            GC A+LP LYWRY HRN     Q+S    Q S  I     P+++ SV++  EGE L    
Sbjct: 149  GCGATLPLLYWRYRHRNQAS-EQDSLQSSQSSSRINVPAGPFSL-SVSRASEGEELQHPA 206

Query: 547  AVLHIRQSLVIASPRLNAAVGHFKMALDCXXXXXXXXXXXXXXXXHSSASASPNLYRLCI 726
                  Q   + S RL   V +FKM LDC                HSSAS +PNLYRLCI
Sbjct: 207  PSPRGSQGSGVLSARLKVLVEYFKMGLDCFFAVWFVVGNVWIFGGHSSASEAPNLYRLCI 266

Query: 727  VFLTFSCIGYAMPFXXXXXXXXXXXXXXXXXGLREEFNQTRGATTDMICSLPTYKFKLKV 906
            VFLTFSCIGYAMPF                 G RE+ +QTRGAT++ I +LPTYKFKLK 
Sbjct: 267  VFLTFSCIGYAMPFILCVTICCCLPCIISILGFREDLSQTRGATSESINALPTYKFKLKK 326

Query: 907  SQNGQENEPSLEDTYEGGILGVGTDRERIVSAEDCICCICLAKYKDNDDLRELPCTHFLH 1086
            S++G + E +      GG++  GT++ER++S ED +CCICLAKY +ND+LRELPC+HF H
Sbjct: 327  SRSGDDRENNSGAGEGGGVVAAGTEKERVISGEDAVCCICLAKYANNDELRELPCSHFFH 386

Query: 1087 KECVDKWLKINALCPLCKSAI 1149
            K+CVDKWLKINALCPLCK+ +
Sbjct: 387  KDCVDKWLKINALCPLCKAEV 407


>ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
            vinifera]
          Length = 421

 Score =  356 bits (914), Expect = 5e-96
 Identities = 192/387 (49%), Positives = 242/387 (62%), Gaps = 4/387 (1%)
 Frame = +1

Query: 1    GSHDEHEHIIDITRDRVGSASDLHGRNNN---ELEESDYDDRSSTIVRAHNGQPT-SASD 168
            G+  + EHIIDITR   G AS  +  N+     L++  +DDR ++  R    QP+ S+S+
Sbjct: 25   GNQIDTEHIIDITRS--GDASSSNSSNDGPSTSLDQLQHDDRPASSARVPISQPSFSSSN 82

Query: 169  SRNASSGRRRDSHRLQRGSPLNSGLWISVELVVSISQIIAAITVVSLSRHEKPETPLFAW 348
              N+ +  RR +   +R SPLNSGLWIS+EL +++SQIIA++ V+SLSRHE P  PLF W
Sbjct: 83   VSNSRNSFRRRADARRRRSPLNSGLWISIELALTVSQIIASVVVLSLSRHEHPHAPLFTW 142

Query: 349  IIGYTIGCVASLPHLYWRYIHRNTPGLTQESAHLHQRSQVITTAPTPYTIMSVNQVLEGE 528
            I+GY  GCVA+LP LYWR+ HRN  G  QESA   Q S        P   +SV    E E
Sbjct: 143  IVGYASGCVATLPILYWRFRHRNQ-GHEQESAQSRQVSFHSNLPGGPTFSLSVTGTSEEE 201

Query: 529  HLHRTGAVLHIRQSLVIASPRLNAAVGHFKMALDCXXXXXXXXXXXXXXXXHSSASASPN 708
                +       QS+   S RL   V +FKMALDC                HSS+S +PN
Sbjct: 202  DRQPSVPATRNSQSVRRLSARLKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSSSEAPN 261

Query: 709  LYRLCIVFLTFSCIGYAMPFXXXXXXXXXXXXXXXXXGLREEFNQTRGATTDMICSLPTY 888
            LYRLCIVFLTFSCIGYAMPF                 G RE+  QTRGAT++ I +LPTY
Sbjct: 262  LYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISILGFREDLTQTRGATSESINALPTY 321

Query: 889  KFKLKVSQNGQENEPSLEDTYEGGILGVGTDRERIVSAEDCICCICLAKYKDNDDLRELP 1068
            KFKLK ++NG + E +     EGG++  GT+RER++S ED +CCICLAKY +ND+LRELP
Sbjct: 322  KFKLKKNRNGDDREGN-SGAGEGGVVAAGTERERVISGEDAVCCICLAKYANNDELRELP 380

Query: 1069 CTHFLHKECVDKWLKINALCPLCKSAI 1149
            C+HF HKECVDKWLKINALCPLCK  +
Sbjct: 381  CSHFFHKECVDKWLKINALCPLCKREV 407


>emb|CBI20932.3| unnamed protein product [Vitis vinifera]
          Length = 401

 Score =  356 bits (914), Expect = 5e-96
 Identities = 192/387 (49%), Positives = 242/387 (62%), Gaps = 4/387 (1%)
 Frame = +1

Query: 1    GSHDEHEHIIDITRDRVGSASDLHGRNNN---ELEESDYDDRSSTIVRAHNGQPT-SASD 168
            G+  + EHIIDITR   G AS  +  N+     L++  +DDR ++  R    QP+ S+S+
Sbjct: 5    GNQIDTEHIIDITRS--GDASSSNSSNDGPSTSLDQLQHDDRPASSARVPISQPSFSSSN 62

Query: 169  SRNASSGRRRDSHRLQRGSPLNSGLWISVELVVSISQIIAAITVVSLSRHEKPETPLFAW 348
              N+ +  RR +   +R SPLNSGLWIS+EL +++SQIIA++ V+SLSRHE P  PLF W
Sbjct: 63   VSNSRNSFRRRADARRRRSPLNSGLWISIELALTVSQIIASVVVLSLSRHEHPHAPLFTW 122

Query: 349  IIGYTIGCVASLPHLYWRYIHRNTPGLTQESAHLHQRSQVITTAPTPYTIMSVNQVLEGE 528
            I+GY  GCVA+LP LYWR+ HRN  G  QESA   Q S        P   +SV    E E
Sbjct: 123  IVGYASGCVATLPILYWRFRHRNQ-GHEQESAQSRQVSFHSNLPGGPTFSLSVTGTSEEE 181

Query: 529  HLHRTGAVLHIRQSLVIASPRLNAAVGHFKMALDCXXXXXXXXXXXXXXXXHSSASASPN 708
                +       QS+   S RL   V +FKMALDC                HSS+S +PN
Sbjct: 182  DRQPSVPATRNSQSVRRLSARLKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSSSEAPN 241

Query: 709  LYRLCIVFLTFSCIGYAMPFXXXXXXXXXXXXXXXXXGLREEFNQTRGATTDMICSLPTY 888
            LYRLCIVFLTFSCIGYAMPF                 G RE+  QTRGAT++ I +LPTY
Sbjct: 242  LYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISILGFREDLTQTRGATSESINALPTY 301

Query: 889  KFKLKVSQNGQENEPSLEDTYEGGILGVGTDRERIVSAEDCICCICLAKYKDNDDLRELP 1068
            KFKLK ++NG + E +     EGG++  GT+RER++S ED +CCICLAKY +ND+LRELP
Sbjct: 302  KFKLKKNRNGDDREGN-SGAGEGGVVAAGTERERVISGEDAVCCICLAKYANNDELRELP 360

Query: 1069 CTHFLHKECVDKWLKINALCPLCKSAI 1149
            C+HF HKECVDKWLKINALCPLCK  +
Sbjct: 361  CSHFFHKECVDKWLKINALCPLCKREV 387


>ref|XP_002309588.1| predicted protein [Populus trichocarpa] gi|222855564|gb|EEE93111.1|
            predicted protein [Populus trichocarpa]
          Length = 406

 Score =  355 bits (912), Expect = 9e-96
 Identities = 193/381 (50%), Positives = 250/381 (65%), Gaps = 5/381 (1%)
 Frame = +1

Query: 22   HIIDITRDRVGSASDLHGRNNNELEESDYDDRSSTIVRAHNGQPTSA----SDSRNASSG 189
            HIIDI R+     S  H R ++ LE S ++DR S+ VRA + QP+++    ++SR++S  
Sbjct: 32   HIIDIPRNIEVPGSPSHDRISSGLEASSHEDRPSSGVRAPSTQPSTSLSNGTNSRSSSLI 91

Query: 190  RRRDSHRLQRGSPLNSGLWISVELVVSISQIIAAITVVSLSRHEKPETPLFAWIIGYTIG 369
            RR ++ R  R SPLNSGLWISVELV+++SQI+A+I V+S+SRHE P  PLFAWI+GY  G
Sbjct: 92   RRGEARR--RRSPLNSGLWISVELVLTLSQIVASIVVLSVSRHEHPHAPLFAWIVGYASG 149

Query: 370  CVASLPHLYWRYIHRNTPGLTQESAHLHQRSQVITTAPTPYTIMSVNQVLEGEHLHRTGA 549
            CVA+LP LYWRY +RN   L Q+SA  HQ S  I     P+++ SV++  E +   R  A
Sbjct: 150  CVATLPLLYWRYRYRNQ-SLEQDSAQNHQGSAHINVPAGPFSL-SVSRNSESDD--RRSA 205

Query: 550  VLHIRQSL-VIASPRLNAAVGHFKMALDCXXXXXXXXXXXXXXXXHSSASASPNLYRLCI 726
                R S   + + RL   V +FKMALDC                HSSA  +PNLYRLCI
Sbjct: 206  TTSPRGSQNAVLNARLKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSAEEAPNLYRLCI 265

Query: 727  VFLTFSCIGYAMPFXXXXXXXXXXXXXXXXXGLREEFNQTRGATTDMICSLPTYKFKLKV 906
            VFLTFSCIGYAMPF                 G RE+  QTRGATT+ I +LPTYKFKL  
Sbjct: 266  VFLTFSCIGYAMPFILCATICCCLPCIISVLGYREDLTQTRGATTESIDALPTYKFKLIK 325

Query: 907  SQNGQENEPSLEDTYEGGILGVGTDRERIVSAEDCICCICLAKYKDNDDLRELPCTHFLH 1086
            ++NG+++     D   GG++  GT++ER++S ED +CCICLAK+ +ND+LRELPC+HF H
Sbjct: 326  NRNGEDSSAGASD---GGVVAAGTEKERVISGEDAVCCICLAKFANNDELRELPCSHFFH 382

Query: 1087 KECVDKWLKINALCPLCKSAI 1149
            KECVDKWLKINA CPLCKS +
Sbjct: 383  KECVDKWLKINASCPLCKSEV 403


>gb|EAY87799.1| hypothetical protein OsI_09219 [Oryza sativa Indica Group]
            gi|125583947|gb|EAZ24878.1| hypothetical protein
            OsJ_08658 [Oryza sativa Japonica Group]
          Length = 398

 Score =  353 bits (905), Expect = 6e-95
 Identities = 195/382 (51%), Positives = 233/382 (60%), Gaps = 4/382 (1%)
 Frame = +1

Query: 16   HEHIIDITRDRVGSASDLHGRNNNELEESDYDDRSSTIVRAHNGQPTSASDSRNA---SS 186
            HEHIIDI RD   S S  H        E +  DRS+T       Q  SA  + +A   S 
Sbjct: 10   HEHIIDIPRDSGPSTSTSHSVARENHGEPNPVDRSATRALVPALQAPSAVGAPSAGHTSG 69

Query: 187  GRRRDSHRLQRGSPLNSGLWISVELVVSISQIIAAITVVSLSRHEKPETPLFAWIIGYTI 366
             RR D++  +  SPLNSGLWIS+E++V++SQI+AAI V+SLSR E P+ PLF W+IGYT+
Sbjct: 70   ARRSDNYVRRHRSPLNSGLWISIEVLVNVSQIVAAIVVLSLSRKEHPQAPLFEWVIGYTV 129

Query: 367  GCVASLPHLYWRYIHRNTPGLTQESAH-LHQRSQVITTAPTPYTIMSVNQVLEGEHLHRT 543
            GC A+LPHLYWRYIHRN      E AH L   SQ  +T P+                 R 
Sbjct: 130  GCFATLPHLYWRYIHRNIVNGENEPAHTLQGSSQNNSTEPS----------ASASERRRN 179

Query: 544  GAVLHIRQSLVIASPRLNAAVGHFKMALDCXXXXXXXXXXXXXXXXHSSASASPNLYRLC 723
             A     ++ V+A+PR+NA   HFKMALDC                 SSA+ +PNLYRLC
Sbjct: 180  AA-----RNAVLANPRINALFDHFKMALDCFFAVWFVVGNVWIFGGRSSAADAPNLYRLC 234

Query: 724  IVFLTFSCIGYAMPFXXXXXXXXXXXXXXXXXGLREEFNQTRGATTDMICSLPTYKFKLK 903
            IVFLTFSCIGYAMPF                 G RE+ N TRGAT++ I SLPTYKFK K
Sbjct: 235  IVFLTFSCIGYAMPFILCAMICCCLPCIISVMGFREDTNNTRGATSESINSLPTYKFKTK 294

Query: 904  VSQNGQENEPSLEDTYEGGILGVGTDRERIVSAEDCICCICLAKYKDNDDLRELPCTHFL 1083
              ++   NE   +D   GGI+  GTD+ER +SAED +CCICLAKY  ND+LRELPCTH  
Sbjct: 295  KRRHSSGNEAEGQD---GGIVAAGTDKERSLSAEDAVCCICLAKYAHNDELRELPCTHCF 351

Query: 1084 HKECVDKWLKINALCPLCKSAI 1149
            HKECVDKWLKINALCPLCKS I
Sbjct: 352  HKECVDKWLKINALCPLCKSEI 373


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