BLASTX nr result
ID: Dioscorea21_contig00013371
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00013371 (652 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002465271.1| hypothetical protein SORBIDRAFT_01g035310 [S... 139 5e-31 ref|XP_003557912.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 136 4e-30 gb|EEC75261.1| hypothetical protein OsI_11578 [Oryza sativa Indi... 136 4e-30 ref|NP_001050120.1| Os03g0351800 [Oryza sativa Japonica Group] g... 136 4e-30 ref|NP_001149786.1| LOC100283413 [Zea mays] gi|195634655|gb|ACG3... 134 1e-29 >ref|XP_002465271.1| hypothetical protein SORBIDRAFT_01g035310 [Sorghum bicolor] gi|241919125|gb|EER92269.1| hypothetical protein SORBIDRAFT_01g035310 [Sorghum bicolor] Length = 285 Score = 139 bits (350), Expect = 5e-31 Identities = 63/127 (49%), Positives = 83/127 (65%) Frame = +3 Query: 270 THWCHQCQQTIRPRDRNLVCPNCDGGFIEELNEMHGIGSTFDLPRMFMDRHRGNPLGLME 449 ++WC+QC+Q +RPR R +VCP CD GF+ E++++ + S F M D HR G+ME Sbjct: 7 SYWCYQCRQRVRPRGREMVCPYCDSGFVAEMDDVDALMSHF--VGMDPDFHRDPRFGIME 64 Query: 450 ALTTFMSHGMGARNREVDVRGRTNSFPDPRMGFGDGPWLIFQGHLPSRMGDNGGFDFLIN 629 A++ M HGM NREVDVRGR N F D M FG GPWL+F+G LP + ++ GFD IN Sbjct: 65 AISAVMRHGMSGMNREVDVRGRPNIFSDLEMEFGSGPWLLFRGQLPGHLTEDNGFDVFIN 124 Query: 630 GGHGFGM 650 G G GM Sbjct: 125 GRRGVGM 131 >ref|XP_003557912.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Brachypodium distachyon] Length = 288 Score = 136 bits (342), Expect = 4e-30 Identities = 62/132 (46%), Positives = 85/132 (64%), Gaps = 2/132 (1%) Frame = +3 Query: 261 SGG--THWCHQCQQTIRPRDRNLVCPNCDGGFIEELNEMHGIGSTFDLPRMFMDRHRGNP 434 SGG ++WC QC+Q +RPR R + CP CD GF+ E++++ + S F M D HR Sbjct: 2 SGGRQSYWCFQCRQRVRPRGREMECPYCDSGFVAEMDDVDAVMSQF--VGMDTDFHRDPR 59 Query: 435 LGLMEALTTFMSHGMGARNREVDVRGRTNSFPDPRMGFGDGPWLIFQGHLPSRMGDNGGF 614 G+MEA++ M HGMG NR+VDVRGR + D M FG GPWL+F+G LP + ++ GF Sbjct: 60 FGIMEAMSAVMRHGMGGMNRDVDVRGRPSILTDLEMEFGSGPWLLFRGQLPGHLSEDNGF 119 Query: 615 DFLINGGHGFGM 650 D ++NG G GM Sbjct: 120 DVIVNGRRGVGM 131 >gb|EEC75261.1| hypothetical protein OsI_11578 [Oryza sativa Indica Group] Length = 208 Score = 136 bits (342), Expect = 4e-30 Identities = 63/132 (47%), Positives = 85/132 (64%), Gaps = 2/132 (1%) Frame = +3 Query: 261 SGG--THWCHQCQQTIRPRDRNLVCPNCDGGFIEELNEMHGIGSTFDLPRMFMDRHRGNP 434 SGG ++WC+QC+Q +RPR +++ CP CD GF+ E++++ + F M D HR Sbjct: 2 SGGRQSYWCYQCRQRVRPRGQDMECPYCDSGFVSEMDDVDALMRHF--VGMDPDFHRDPR 59 Query: 435 LGLMEALTTFMSHGMGARNREVDVRGRTNSFPDPRMGFGDGPWLIFQGHLPSRMGDNGGF 614 G+MEA++ M HGM NREVDVRGR N F D M FG GPWL+F+G LP + ++ GF Sbjct: 60 FGIMEAISAVMRHGMAGTNREVDVRGRPNIFSDLEMEFGSGPWLLFRGQLPGHLSEDNGF 119 Query: 615 DFLINGGHGFGM 650 D ING G GM Sbjct: 120 DVFINGRRGVGM 131 >ref|NP_001050120.1| Os03g0351800 [Oryza sativa Japonica Group] gi|108708145|gb|ABF95940.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa Japonica Group] gi|113548591|dbj|BAF12034.1| Os03g0351800 [Oryza sativa Japonica Group] gi|125586254|gb|EAZ26918.1| hypothetical protein OsJ_10846 [Oryza sativa Japonica Group] gi|215697791|dbj|BAG91984.1| unnamed protein product [Oryza sativa Japonica Group] Length = 283 Score = 136 bits (342), Expect = 4e-30 Identities = 63/132 (47%), Positives = 85/132 (64%), Gaps = 2/132 (1%) Frame = +3 Query: 261 SGG--THWCHQCQQTIRPRDRNLVCPNCDGGFIEELNEMHGIGSTFDLPRMFMDRHRGNP 434 SGG ++WC+QC+Q +RPR +++ CP CD GF+ E++++ + F M D HR Sbjct: 2 SGGRQSYWCYQCRQRVRPRGQDMECPYCDSGFVSEMDDVDALMRHF--VGMDPDFHRDPR 59 Query: 435 LGLMEALTTFMSHGMGARNREVDVRGRTNSFPDPRMGFGDGPWLIFQGHLPSRMGDNGGF 614 G+MEA++ M HGM NREVDVRGR N F D M FG GPWL+F+G LP + ++ GF Sbjct: 60 FGIMEAISAVMRHGMAGTNREVDVRGRPNIFSDLEMEFGSGPWLLFRGQLPGHLSEDNGF 119 Query: 615 DFLINGGHGFGM 650 D ING G GM Sbjct: 120 DVFINGRRGVGM 131 >ref|NP_001149786.1| LOC100283413 [Zea mays] gi|195634655|gb|ACG36796.1| RHC1A [Zea mays] gi|224031911|gb|ACN35031.1| unknown [Zea mays] gi|238007022|gb|ACR34546.1| unknown [Zea mays] gi|413955730|gb|AFW88379.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea mays] gi|413955731|gb|AFW88380.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea mays] Length = 292 Score = 134 bits (337), Expect = 1e-29 Identities = 63/132 (47%), Positives = 84/132 (63%), Gaps = 1/132 (0%) Frame = +3 Query: 255 MSSGG-THWCHQCQQTIRPRDRNLVCPNCDGGFIEELNEMHGIGSTFDLPRMFMDRHRGN 431 MS+G +WC+QC+Q +RPR R +VCP CD GF+ E++++ + S F D HR Sbjct: 1 MSAGRQAYWCYQCRQRVRPRGREMVCPYCDSGFVAEMDDVDALMSHF--VGTDPDFHRDP 58 Query: 432 PLGLMEALTTFMSHGMGARNREVDVRGRTNSFPDPRMGFGDGPWLIFQGHLPSRMGDNGG 611 G+MEA++ M HGM NREVDVRGR N F D M FG GPWL+F+G LP + ++ G Sbjct: 59 RFGIMEAISAVMRHGMAGMNREVDVRGRPNFFSDLEMEFGSGPWLLFRGQLPGHLTEDNG 118 Query: 612 FDFLINGGHGFG 647 FD +NG G G Sbjct: 119 FDVFVNGRRGGG 130