BLASTX nr result

ID: Dioscorea21_contig00013355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013355
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320711.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [...    74   1e-11
emb|CBI16589.3| unnamed protein product [Vitis vinifera]               74   1e-11
ref|XP_002511647.1| DNA binding protein, putative [Ricinus commu...    72   5e-11
ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [...    70   2e-10

>ref|XP_002320711.1| predicted protein [Populus trichocarpa] gi|222861484|gb|EEE99026.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 46/97 (47%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
 Frame = -1

Query: 324 QCVPTCDTDDXXXXXXXXXXXXLHQHHPSNRQHVSP--EYEVAELTWENGNVAMHGFGHA 151
           QCVP+ + DD              + H ++     P  +YEVAELTWENG +AMHG G  
Sbjct: 4   QCVPSWEVDDNRTTAPKLSL----RFHSNSSAPDMPMLDYEVAELTWENGQIAMHGLGPP 59

Query: 150 RI-SKPIAKYPSTTGSTVGWDKQHQSGTLESIVDQAT 43
           R+ +KPIA   ST+ S   WDK   SGTLESIV+QAT
Sbjct: 60  RVPAKPIA---STSPSKYTWDKPRASGTLESIVNQAT 93


>ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
          Length = 465

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 46/98 (46%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
 Frame = -1

Query: 330 MSQCVPTCDTDDXXXXXXXXXXXXLHQHHPSNRQHVSP-EYEVAELTWENGNVAMHGFGH 154
           MSQCVP+ D DD               H  S    V   +YEVAELTWENG +AMHG G 
Sbjct: 1   MSQCVPSWDIDDNPTPPRLFL----RSHSNSTAPDVPMLDYEVAELTWENGQLAMHGLGQ 56

Query: 153 ARI-SKPIAKYPSTTGSTVGWDKQHQSGTLESIVDQAT 43
            R+ +KP+A   S   S   W+K    GTLESIV+QAT
Sbjct: 57  PRVPAKPVA---SAAVSKYPWEKPRAGGTLESIVNQAT 91


>emb|CBI16589.3| unnamed protein product [Vitis vinifera]
          Length = 278

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 46/98 (46%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
 Frame = -1

Query: 330 MSQCVPTCDTDDXXXXXXXXXXXXLHQHHPSNRQHVSP-EYEVAELTWENGNVAMHGFGH 154
           MSQCVP+ D DD               H  S    V   +YEVAELTWENG +AMHG G 
Sbjct: 1   MSQCVPSWDIDDNPTPPRLFL----RSHSNSTAPDVPMLDYEVAELTWENGQLAMHGLGQ 56

Query: 153 ARI-SKPIAKYPSTTGSTVGWDKQHQSGTLESIVDQAT 43
            R+ +KP+A   S   S   W+K    GTLESIV+QAT
Sbjct: 57  PRVPAKPVA---SAAVSKYPWEKPRAGGTLESIVNQAT 91


>ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
           gi|223548827|gb|EEF50316.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 465

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 42/101 (41%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
 Frame = -1

Query: 330 MSQCVPTCDTDDXXXXXXXXXXXXLHQHHPSNRQHVSPE-----YEVAELTWENGNVAMH 166
           M+QCVP+ D +D                  SN    +P+     YEVAELTWENG ++MH
Sbjct: 1   MTQCVPSWDLEDNPSPAAKHSFR-------SNSNSSAPDVPMLDYEVAELTWENGQLSMH 53

Query: 165 GFGHARISKPIAKYPSTTGSTVGWDKQHQSGTLESIVDQAT 43
           G G  R+  P+   PS++ S   W+K    GTLESIV+QAT
Sbjct: 54  GLGPPRL--PVKTIPSSSPSKYTWEKPRAGGTLESIVNQAT 92


>ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
          Length = 459

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 42/102 (41%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
 Frame = -1

Query: 330 MSQCVPTCDTDDXXXXXXXXXXXXLHQHHPSNRQHVSPE-----YEVAELTWENGNVAMH 166
           MSQCVP+ D +D                  SN    +P+     YEVAELTWENG ++MH
Sbjct: 1   MSQCVPSWDVEDNPPPSRVSLR--------SNSNSTAPDVPMLDYEVAELTWENGQLSMH 52

Query: 165 GFGHARISKPIAKYPSTTGSTVGWDKQHQSGTLESIVDQATN 40
           G G  R+     K P+   +   W+K   SGTLESIV+QAT+
Sbjct: 53  GLGLPRVP---VKPPTAATNKYTWEKPRGSGTLESIVNQATS 91


Top