BLASTX nr result

ID: Dioscorea21_contig00013354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013354
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529415.1| mom(plant), putative [Ricinus communis] gi|2...   103   2e-20
ref|XP_002282476.2| PREDICTED: uncharacterized protein LOC100258...    92   3e-17
ref|XP_002328309.1| chromatin remodeling complex subunit [Populu...    91   7e-17
ref|XP_002318937.1| chromatin remodeling complex subunit [Populu...    90   2e-16
ref|XP_002330022.1| chromatin remodeling complex subunit [Populu...    90   2e-16

>ref|XP_002529415.1| mom(plant), putative [Ricinus communis] gi|223531092|gb|EEF32941.1|
            mom(plant), putative [Ricinus communis]
          Length = 1982

 Score =  103 bits (256), Expect = 2e-20
 Identities = 55/123 (44%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
 Frame = +2

Query: 71   AEGAKSQPNLKSLCT-----PGSVTANNDGREKLRHAQRNXXXXXXXXXXXXCGTLRLPV 235
            A  A   P+L+SL       P S  A ++ R  +  +Q++            C  L+LP 
Sbjct: 854  ASYANHAPSLQSLTNVILDEPSSNMAKSNERINVHDSQKSLHLLLKPDMAKLCEILKLPD 913

Query: 236  DVKCLAEKLLEYVMNNHLVVRDPETILQALKISLCWRAASFLKYKLDHGESLALARKYSN 415
            +VK + +  LEYVMNNH V+R+P TILQA +ISLCW AAS LK+K+DH ESLALA+++ N
Sbjct: 914  NVKAMVQSFLEYVMNNHHVIREPATILQAFQISLCWTAASLLKHKIDHKESLALAKQHLN 973

Query: 416  FEC 424
            F C
Sbjct: 974  FGC 976


>ref|XP_002282476.2| PREDICTED: uncharacterized protein LOC100258707 [Vitis vinifera]
          Length = 1534

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 55/140 (39%), Positives = 76/140 (54%), Gaps = 3/140 (2%)
 Frame = +2

Query: 14   SNTSQATFTPIVLNSISKEAEGAKSQPNLKSLCTPGSV---TANNDGREKLRHAQRNXXX 184
            +N SQ+   P      +  A  A + P L S  +  S    T   +GR KLR AQ++   
Sbjct: 628  NNESQSLSRPTACTHDALHANRASTSPPLVSDISEASSEIHTIEFEGRRKLRDAQKSLHL 687

Query: 185  XXXXXXXXXCGTLRLPVDVKCLAEKLLEYVMNNHLVVRDPETILQALKISLCWRAASFLK 364
                     C  L+L  DVK +  +LLEYVMNNH V R+P +ILQA +ISLCW AAS + 
Sbjct: 688  VLETDISKLCDILQLSEDVKGMVGRLLEYVMNNHHVNREPASILQAFQISLCWTAASLMN 747

Query: 365  YKLDHGESLALARKYSNFEC 424
            +++D   SL LA+++  F C
Sbjct: 748  HEIDRKGSLMLAKQHLAFTC 767


>ref|XP_002328309.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222837824|gb|EEE76189.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1996

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 48/111 (43%), Positives = 68/111 (61%)
 Frame = +2

Query: 95   NLKSLCTPGSVTANNDGREKLRHAQRNXXXXXXXXXXXXCGTLRLPVDVKCLAEKLLEYV 274
            N K    P + T + + R  L +++++               L+LP DVK + ++ LEYV
Sbjct: 901  NNKLSLLPKANTVDYNERMNLHYSRKSLHLVLKPEIEKLSEILQLPEDVKVMVDQFLEYV 960

Query: 275  MNNHLVVRDPETILQALKISLCWRAASFLKYKLDHGESLALARKYSNFECS 427
            +NNH V R+P +ILQA  ISLCW AAS +KYKLD  ESLALA+++ NF C+
Sbjct: 961  LNNHHVSREPASILQAFLISLCWTAASMIKYKLDRKESLALAKQHLNFCCT 1011


>ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222857313|gb|EEE94860.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2283

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 54/139 (38%), Positives = 75/139 (53%)
 Frame = +2

Query: 8    LPSNTSQATFTPIVLNSISKEAEGAKSQPNLKSLCTPGSVTANNDGREKLRHAQRNXXXX 187
            LPS+T +   T    N +S       S  N   +     V  N   R  L  ++++    
Sbjct: 1221 LPSSTGRLNTT--ATNHVSNFRH---SNSNSSEVLKANKVEYNE--RMNLHDSEKSLHLI 1273

Query: 188  XXXXXXXXCGTLRLPVDVKCLAEKLLEYVMNNHLVVRDPETILQALKISLCWRAASFLKY 367
                    C  L+LP +VK + E+ LEYV+NNH + R+P +ILQA  ISLCW +AS LK+
Sbjct: 1274 LKPEITKLCEILQLPENVKVMVERFLEYVLNNHHISREPASILQAFLISLCWTSASMLKH 1333

Query: 368  KLDHGESLALARKYSNFEC 424
            KL H ESLALA+++ NF C
Sbjct: 1334 KLGHKESLALAKQHLNFGC 1352


>ref|XP_002330022.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222871447|gb|EEF08578.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1441

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 44/96 (45%), Positives = 60/96 (62%)
 Frame = +2

Query: 137 NDGREKLRHAQRNXXXXXXXXXXXXCGTLRLPVDVKCLAEKLLEYVMNNHLVVRDPETIL 316
           N GR     ++++            C  L+LP +VK + E+  EYV+NNH V R+P ++L
Sbjct: 325 NGGRNLHDDSEKSLHLFLKPEIAKLCEILQLPENVKVMVEQFREYVLNNHHVSREPPSLL 384

Query: 317 QALKISLCWRAASFLKYKLDHGESLALARKYSNFEC 424
           Q   ISLCW AAS LK+KLDH ESLALA+++ NF C
Sbjct: 385 QGFLISLCWTAASMLKHKLDHKESLALAKEHLNFSC 420


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