BLASTX nr result
ID: Dioscorea21_contig00013354
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00013354 (428 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002529415.1| mom(plant), putative [Ricinus communis] gi|2... 103 2e-20 ref|XP_002282476.2| PREDICTED: uncharacterized protein LOC100258... 92 3e-17 ref|XP_002328309.1| chromatin remodeling complex subunit [Populu... 91 7e-17 ref|XP_002318937.1| chromatin remodeling complex subunit [Populu... 90 2e-16 ref|XP_002330022.1| chromatin remodeling complex subunit [Populu... 90 2e-16 >ref|XP_002529415.1| mom(plant), putative [Ricinus communis] gi|223531092|gb|EEF32941.1| mom(plant), putative [Ricinus communis] Length = 1982 Score = 103 bits (256), Expect = 2e-20 Identities = 55/123 (44%), Positives = 75/123 (60%), Gaps = 5/123 (4%) Frame = +2 Query: 71 AEGAKSQPNLKSLCT-----PGSVTANNDGREKLRHAQRNXXXXXXXXXXXXCGTLRLPV 235 A A P+L+SL P S A ++ R + +Q++ C L+LP Sbjct: 854 ASYANHAPSLQSLTNVILDEPSSNMAKSNERINVHDSQKSLHLLLKPDMAKLCEILKLPD 913 Query: 236 DVKCLAEKLLEYVMNNHLVVRDPETILQALKISLCWRAASFLKYKLDHGESLALARKYSN 415 +VK + + LEYVMNNH V+R+P TILQA +ISLCW AAS LK+K+DH ESLALA+++ N Sbjct: 914 NVKAMVQSFLEYVMNNHHVIREPATILQAFQISLCWTAASLLKHKIDHKESLALAKQHLN 973 Query: 416 FEC 424 F C Sbjct: 974 FGC 976 >ref|XP_002282476.2| PREDICTED: uncharacterized protein LOC100258707 [Vitis vinifera] Length = 1534 Score = 92.4 bits (228), Expect = 3e-17 Identities = 55/140 (39%), Positives = 76/140 (54%), Gaps = 3/140 (2%) Frame = +2 Query: 14 SNTSQATFTPIVLNSISKEAEGAKSQPNLKSLCTPGSV---TANNDGREKLRHAQRNXXX 184 +N SQ+ P + A A + P L S + S T +GR KLR AQ++ Sbjct: 628 NNESQSLSRPTACTHDALHANRASTSPPLVSDISEASSEIHTIEFEGRRKLRDAQKSLHL 687 Query: 185 XXXXXXXXXCGTLRLPVDVKCLAEKLLEYVMNNHLVVRDPETILQALKISLCWRAASFLK 364 C L+L DVK + +LLEYVMNNH V R+P +ILQA +ISLCW AAS + Sbjct: 688 VLETDISKLCDILQLSEDVKGMVGRLLEYVMNNHHVNREPASILQAFQISLCWTAASLMN 747 Query: 365 YKLDHGESLALARKYSNFEC 424 +++D SL LA+++ F C Sbjct: 748 HEIDRKGSLMLAKQHLAFTC 767 >ref|XP_002328309.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222837824|gb|EEE76189.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1996 Score = 91.3 bits (225), Expect = 7e-17 Identities = 48/111 (43%), Positives = 68/111 (61%) Frame = +2 Query: 95 NLKSLCTPGSVTANNDGREKLRHAQRNXXXXXXXXXXXXCGTLRLPVDVKCLAEKLLEYV 274 N K P + T + + R L +++++ L+LP DVK + ++ LEYV Sbjct: 901 NNKLSLLPKANTVDYNERMNLHYSRKSLHLVLKPEIEKLSEILQLPEDVKVMVDQFLEYV 960 Query: 275 MNNHLVVRDPETILQALKISLCWRAASFLKYKLDHGESLALARKYSNFECS 427 +NNH V R+P +ILQA ISLCW AAS +KYKLD ESLALA+++ NF C+ Sbjct: 961 LNNHHVSREPASILQAFLISLCWTAASMIKYKLDRKESLALAKQHLNFCCT 1011 >ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222857313|gb|EEE94860.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 2283 Score = 90.1 bits (222), Expect = 2e-16 Identities = 54/139 (38%), Positives = 75/139 (53%) Frame = +2 Query: 8 LPSNTSQATFTPIVLNSISKEAEGAKSQPNLKSLCTPGSVTANNDGREKLRHAQRNXXXX 187 LPS+T + T N +S S N + V N R L ++++ Sbjct: 1221 LPSSTGRLNTT--ATNHVSNFRH---SNSNSSEVLKANKVEYNE--RMNLHDSEKSLHLI 1273 Query: 188 XXXXXXXXCGTLRLPVDVKCLAEKLLEYVMNNHLVVRDPETILQALKISLCWRAASFLKY 367 C L+LP +VK + E+ LEYV+NNH + R+P +ILQA ISLCW +AS LK+ Sbjct: 1274 LKPEITKLCEILQLPENVKVMVERFLEYVLNNHHISREPASILQAFLISLCWTSASMLKH 1333 Query: 368 KLDHGESLALARKYSNFEC 424 KL H ESLALA+++ NF C Sbjct: 1334 KLGHKESLALAKQHLNFGC 1352 >ref|XP_002330022.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222871447|gb|EEF08578.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1441 Score = 89.7 bits (221), Expect = 2e-16 Identities = 44/96 (45%), Positives = 60/96 (62%) Frame = +2 Query: 137 NDGREKLRHAQRNXXXXXXXXXXXXCGTLRLPVDVKCLAEKLLEYVMNNHLVVRDPETIL 316 N GR ++++ C L+LP +VK + E+ EYV+NNH V R+P ++L Sbjct: 325 NGGRNLHDDSEKSLHLFLKPEIAKLCEILQLPENVKVMVEQFREYVLNNHHVSREPPSLL 384 Query: 317 QALKISLCWRAASFLKYKLDHGESLALARKYSNFEC 424 Q ISLCW AAS LK+KLDH ESLALA+++ NF C Sbjct: 385 QGFLISLCWTAASMLKHKLDHKESLALAKEHLNFSC 420