BLASTX nr result
ID: Dioscorea21_contig00013335
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00013335 (1325 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002530460.1| transcription cofactor, putative [Ricinus co... 82 2e-13 ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264... 77 1e-11 ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II tra... 75 3e-11 ref|XP_004137040.1| PREDICTED: uncharacterized protein LOC101220... 75 3e-11 gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata] 72 3e-10 >ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis] gi|223530005|gb|EEF31930.1| transcription cofactor, putative [Ricinus communis] Length = 1382 Score = 82.4 bits (202), Expect = 2e-13 Identities = 48/104 (46%), Positives = 64/104 (61%), Gaps = 5/104 (4%) Frame = -1 Query: 1226 NQSLAQQALLPQNISKNAPSTTIQNS---TSLPPPMQGVTQNAMSHI-GANSNLQNVSSM 1059 NQ+ +Q LL QNI N ST IQ+S TS PP+ G+ Q ++ ++ G NSN+QN+S + Sbjct: 139 NQTQTRQQLLSQNIQNNMASTGIQSSAGLTSALPPVSGLAQTSIPNVVGQNSNMQNISGV 198 Query: 1058 PQNSINSIAGQGATPNIY-NSQRQMQGQRQPPSIVTQQHQQPPQ 930 PQNS + GQG N++ NSQRQM Q+ P QQ Q P Q Sbjct: 199 PQNSAGNSLGQGVPSNMFANSQRQMPRQQVVPQQQQQQSQNPTQ 242 >ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264243 [Vitis vinifera] Length = 1671 Score = 77.0 bits (188), Expect = 1e-11 Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 5/109 (4%) Frame = -1 Query: 1226 NQSLAQQALLPQNISKNAPSTTIQNSTSLPPPMQGVT---QNAMSHI-GANSNLQNVSSM 1059 NQS +Q LL QNI N S + +S SLP + VT Q M ++ G NS +QN+S + Sbjct: 456 NQSQTRQQLLAQNIQTNIASG-VPSSASLPSTLSSVTSLNQTPMQNVVGQNSGMQNISGI 514 Query: 1058 PQNSINSIAGQGATPNIY-NSQRQMQGQRQPPSIVTQQHQQPPQNTRIY 915 PQNS+ + GQG N++ NSQRQ QG+ P +V QQ QQ Q+++ Y Sbjct: 515 PQNSVGNSMGQGVPSNMFANSQRQSQGR---PQVVPQQQQQQSQSSQQY 560 >ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a-like, partial [Cucumis sativus] Length = 589 Score = 75.5 bits (184), Expect = 3e-11 Identities = 42/101 (41%), Positives = 63/101 (62%), Gaps = 2/101 (1%) Frame = -1 Query: 1226 NQSLAQQALLPQNISKNAPSTTIQNSTSLPPPMQGVTQNAMSH-IGANSNLQNVSSMPQN 1050 NQ +Q +L QNI N + + +S PP+ G+ ++MS+ +G N N+QNVS +PQN Sbjct: 137 NQPQPRQQILQQNIPNNIVPQSSSSLSSAVPPVAGLASSSMSNMVGQNPNIQNVSGVPQN 196 Query: 1049 SINSIAGQGATPNIY-NSQRQMQGQRQPPSIVTQQHQQPPQ 930 S + GQG N++ NSQR +QG++ +V+QQ QQ PQ Sbjct: 197 SGGNAMGQGVPSNVFSNSQRPLQGRQ----VVSQQQQQQPQ 233 >ref|XP_004137040.1| PREDICTED: uncharacterized protein LOC101220890 [Cucumis sativus] Length = 1345 Score = 75.5 bits (184), Expect = 3e-11 Identities = 42/101 (41%), Positives = 63/101 (62%), Gaps = 2/101 (1%) Frame = -1 Query: 1226 NQSLAQQALLPQNISKNAPSTTIQNSTSLPPPMQGVTQNAMSH-IGANSNLQNVSSMPQN 1050 NQ +Q +L QNI N + + +S PP+ G+ ++MS+ +G N N+QNVS +PQN Sbjct: 142 NQPQPRQQILQQNIPNNIVPQSSSSLSSAVPPVAGLASSSMSNMVGQNPNIQNVSGVPQN 201 Query: 1049 SINSIAGQGATPNIY-NSQRQMQGQRQPPSIVTQQHQQPPQ 930 S + GQG N++ NSQR +QG++ +V+QQ QQ PQ Sbjct: 202 SGGNAMGQGVPSNVFSNSQRPLQGRQ----VVSQQQQQQPQ 238 >gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata] Length = 1405 Score = 72.0 bits (175), Expect = 3e-10 Identities = 44/107 (41%), Positives = 66/107 (61%), Gaps = 5/107 (4%) Frame = -1 Query: 1226 NQSLAQQALLPQNISKNAPSTTIQNSTSLP---PPMQGVTQNAM-SHIGANSNLQNVSSM 1059 NQS +Q LL QNI N S +Q S+ L P + G++Q+ + S +G N+QN+S + Sbjct: 151 NQSQVRQQLLSQNIQNNMSSAGVQGSSGLSSALPSVSGLSQSPIPSVVGQTVNMQNMSGI 210 Query: 1058 PQNSINSIAGQGATPNIY-NSQRQMQGQRQPPSIVTQQHQQPPQNTR 921 QNS + GQG N++ NSQRQ+QG++Q ++ QQ QQ QN++ Sbjct: 211 SQNSGGNSMGQGVPSNLFANSQRQIQGRQQ---VLPQQQQQQSQNSQ 254