BLASTX nr result

ID: Dioscorea21_contig00013327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013327
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234650.1| ethylene-responsive RNA helicase [Solanum ly...    70   1e-10
gb|EEE54050.1| hypothetical protein OsJ_00740 [Oryza sativa Japo...    70   1e-10
gb|EEC70110.1| hypothetical protein OsI_00766 [Oryza sativa Indi...    70   1e-10
sp|Q5QMN3.2|RH20_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA ...    70   1e-10
ref|XP_004146825.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    70   2e-10

>ref|NP_001234650.1| ethylene-responsive RNA helicase [Solanum lycopersicum]
           gi|5669638|gb|AAD46404.1|AF096248_1 ethylene-responsive
           RNA helicase [Solanum lycopersicum]
          Length = 474

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/39 (84%), Positives = 35/39 (89%)
 Frame = -3

Query: 363 YTFFTAANARFAKDLIHILEEAGQKVPPELAAMGHGPPP 247
           YTFFTAANARFAKDL++ILEEAGQKV PELA MG G PP
Sbjct: 415 YTFFTAANARFAKDLVNILEEAGQKVSPELAKMGRGAPP 453


>gb|EEE54050.1| hypothetical protein OsJ_00740 [Oryza sativa Japonica Group]
          Length = 468

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/39 (87%), Positives = 35/39 (89%)
 Frame = -3

Query: 363 YTFFTAANARFAKDLIHILEEAGQKVPPELAAMGHGPPP 247
           YTFFTAANARFAKDLI+ILEEAGQKV PELA MG G PP
Sbjct: 411 YTFFTAANARFAKDLINILEEAGQKVSPELANMGRGAPP 449


>gb|EEC70110.1| hypothetical protein OsI_00766 [Oryza sativa Indica Group]
          Length = 470

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/39 (87%), Positives = 35/39 (89%)
 Frame = -3

Query: 363 YTFFTAANARFAKDLIHILEEAGQKVPPELAAMGHGPPP 247
           YTFFTAANARFAKDLI+ILEEAGQKV PELA MG G PP
Sbjct: 413 YTFFTAANARFAKDLINILEEAGQKVSPELANMGRGAPP 451


>sp|Q5QMN3.2|RH20_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 20
          Length = 494

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/39 (87%), Positives = 35/39 (89%)
 Frame = -3

Query: 363 YTFFTAANARFAKDLIHILEEAGQKVPPELAAMGHGPPP 247
           YTFFTAANARFAKDLI+ILEEAGQKV PELA MG G PP
Sbjct: 437 YTFFTAANARFAKDLINILEEAGQKVSPELANMGRGAPP 475


>ref|XP_004146825.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Cucumis
           sativus] gi|449476660|ref|XP_004154799.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 20-like [Cucumis
           sativus]
          Length = 505

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/39 (87%), Positives = 35/39 (89%)
 Frame = -3

Query: 363 YTFFTAANARFAKDLIHILEEAGQKVPPELAAMGHGPPP 247
           YTFFTAANARFAK+LI ILEEAGQKV PELAAMG G PP
Sbjct: 445 YTFFTAANARFAKELIGILEEAGQKVSPELAAMGRGAPP 483


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