BLASTX nr result

ID: Dioscorea21_contig00013292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013292
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADH94724.1| gigantea [Hordeum bogdanii]                             91   7e-17
ref|XP_003564357.1| PREDICTED: protein GIGANTEA-like [Brachypodi...    91   1e-16
emb|CAY26028.1| GIGANTEA [Lolium perenne] gi|315194530|gb|ABF838...    91   1e-16
ref|NP_001042220.1| Os01g0182600 [Oryza sativa Japonica Group] g...    90   2e-16
gb|EEE54000.1| hypothetical protein OsJ_00641 [Oryza sativa Japo...    90   2e-16

>gb|ADH94724.1| gigantea [Hordeum bogdanii]
          Length = 468

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 42/66 (63%), Positives = 51/66 (77%)
 Frame = +3

Query: 3   LSILRRCKWDTQISTRASSLYHLIDIHGKTVASIVNKAEPFEAHLVLTPAWKEDTMRLST 182
           LS L+RCKWDT+ISTRASSLYHLID+HGKTV+SIVNKAEP EAHL  T   ++D   +  
Sbjct: 302 LSSLKRCKWDTEISTRASSLYHLIDLHGKTVSSIVNKAEPLEAHLTFTSVKRDDQQHIEE 361

Query: 183 KKSMAS 200
             + +S
Sbjct: 362 NSTSSS 367


>ref|XP_003564357.1| PREDICTED: protein GIGANTEA-like [Brachypodium distachyon]
          Length = 1155

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/66 (65%), Positives = 50/66 (75%)
 Frame = +3

Query: 3   LSILRRCKWDTQISTRASSLYHLIDIHGKTVASIVNKAEPFEAHLVLTPAWKEDTMRLST 182
           LS L+RCKWD +ISTRASSLYHLID+HGKTV+SIVNKAEP EAHL LT   K+D   +  
Sbjct: 746 LSSLKRCKWDAEISTRASSLYHLIDLHGKTVSSIVNKAEPLEAHLTLTSVRKDDGQHIEE 805

Query: 183 KKSMAS 200
               +S
Sbjct: 806 NNVSSS 811


>emb|CAY26028.1| GIGANTEA [Lolium perenne] gi|315194530|gb|ABF83898.2| GIGANTEA
           [Lolium perenne]
          Length = 1148

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/66 (65%), Positives = 51/66 (77%)
 Frame = +3

Query: 3   LSILRRCKWDTQISTRASSLYHLIDIHGKTVASIVNKAEPFEAHLVLTPAWKEDTMRLST 182
           LS L+RCKWD +ISTRASSLYHLID+HGKTV+SIVNKAEP EAHL LT   K+D   +  
Sbjct: 744 LSALKRCKWDAEISTRASSLYHLIDLHGKTVSSIVNKAEPLEAHLNLTAVKKDDQHHIEE 803

Query: 183 KKSMAS 200
             + +S
Sbjct: 804 SNTSSS 809


>ref|NP_001042220.1| Os01g0182600 [Oryza sativa Japonica Group]
           gi|67476983|sp|Q9AWL7.2|GIGAN_ORYSJ RecName:
           Full=Protein GIGANTEA gi|55296272|dbj|BAD68052.1|
           putative gigantea [Oryza sativa Japonica Group]
           gi|113531751|dbj|BAF04134.1| Os01g0182600 [Oryza sativa
           Japonica Group]
          Length = 1160

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 41/54 (75%), Positives = 47/54 (87%)
 Frame = +3

Query: 3   LSILRRCKWDTQISTRASSLYHLIDIHGKTVASIVNKAEPFEAHLVLTPAWKED 164
           LS L++CKWD +ISTRASSLYHLID+HGKTV SIVNKAEP EAHL LTP  K++
Sbjct: 752 LSALKQCKWDAEISTRASSLYHLIDLHGKTVTSIVNKAEPLEAHLTLTPVKKDE 805


>gb|EEE54000.1| hypothetical protein OsJ_00641 [Oryza sativa Japonica Group]
          Length = 1176

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 41/54 (75%), Positives = 47/54 (87%)
 Frame = +3

Query: 3   LSILRRCKWDTQISTRASSLYHLIDIHGKTVASIVNKAEPFEAHLVLTPAWKED 164
           LS L++CKWD +ISTRASSLYHLID+HGKTV SIVNKAEP EAHL LTP  K++
Sbjct: 768 LSALKQCKWDAEISTRASSLYHLIDLHGKTVTSIVNKAEPLEAHLTLTPVKKDE 821


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