BLASTX nr result
ID: Dioscorea21_contig00013292
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00013292 (204 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADH94724.1| gigantea [Hordeum bogdanii] 91 7e-17 ref|XP_003564357.1| PREDICTED: protein GIGANTEA-like [Brachypodi... 91 1e-16 emb|CAY26028.1| GIGANTEA [Lolium perenne] gi|315194530|gb|ABF838... 91 1e-16 ref|NP_001042220.1| Os01g0182600 [Oryza sativa Japonica Group] g... 90 2e-16 gb|EEE54000.1| hypothetical protein OsJ_00641 [Oryza sativa Japo... 90 2e-16 >gb|ADH94724.1| gigantea [Hordeum bogdanii] Length = 468 Score = 91.3 bits (225), Expect = 7e-17 Identities = 42/66 (63%), Positives = 51/66 (77%) Frame = +3 Query: 3 LSILRRCKWDTQISTRASSLYHLIDIHGKTVASIVNKAEPFEAHLVLTPAWKEDTMRLST 182 LS L+RCKWDT+ISTRASSLYHLID+HGKTV+SIVNKAEP EAHL T ++D + Sbjct: 302 LSSLKRCKWDTEISTRASSLYHLIDLHGKTVSSIVNKAEPLEAHLTFTSVKRDDQQHIEE 361 Query: 183 KKSMAS 200 + +S Sbjct: 362 NSTSSS 367 >ref|XP_003564357.1| PREDICTED: protein GIGANTEA-like [Brachypodium distachyon] Length = 1155 Score = 90.5 bits (223), Expect = 1e-16 Identities = 43/66 (65%), Positives = 50/66 (75%) Frame = +3 Query: 3 LSILRRCKWDTQISTRASSLYHLIDIHGKTVASIVNKAEPFEAHLVLTPAWKEDTMRLST 182 LS L+RCKWD +ISTRASSLYHLID+HGKTV+SIVNKAEP EAHL LT K+D + Sbjct: 746 LSSLKRCKWDAEISTRASSLYHLIDLHGKTVSSIVNKAEPLEAHLTLTSVRKDDGQHIEE 805 Query: 183 KKSMAS 200 +S Sbjct: 806 NNVSSS 811 >emb|CAY26028.1| GIGANTEA [Lolium perenne] gi|315194530|gb|ABF83898.2| GIGANTEA [Lolium perenne] Length = 1148 Score = 90.5 bits (223), Expect = 1e-16 Identities = 43/66 (65%), Positives = 51/66 (77%) Frame = +3 Query: 3 LSILRRCKWDTQISTRASSLYHLIDIHGKTVASIVNKAEPFEAHLVLTPAWKEDTMRLST 182 LS L+RCKWD +ISTRASSLYHLID+HGKTV+SIVNKAEP EAHL LT K+D + Sbjct: 744 LSALKRCKWDAEISTRASSLYHLIDLHGKTVSSIVNKAEPLEAHLNLTAVKKDDQHHIEE 803 Query: 183 KKSMAS 200 + +S Sbjct: 804 SNTSSS 809 >ref|NP_001042220.1| Os01g0182600 [Oryza sativa Japonica Group] gi|67476983|sp|Q9AWL7.2|GIGAN_ORYSJ RecName: Full=Protein GIGANTEA gi|55296272|dbj|BAD68052.1| putative gigantea [Oryza sativa Japonica Group] gi|113531751|dbj|BAF04134.1| Os01g0182600 [Oryza sativa Japonica Group] Length = 1160 Score = 90.1 bits (222), Expect = 2e-16 Identities = 41/54 (75%), Positives = 47/54 (87%) Frame = +3 Query: 3 LSILRRCKWDTQISTRASSLYHLIDIHGKTVASIVNKAEPFEAHLVLTPAWKED 164 LS L++CKWD +ISTRASSLYHLID+HGKTV SIVNKAEP EAHL LTP K++ Sbjct: 752 LSALKQCKWDAEISTRASSLYHLIDLHGKTVTSIVNKAEPLEAHLTLTPVKKDE 805 >gb|EEE54000.1| hypothetical protein OsJ_00641 [Oryza sativa Japonica Group] Length = 1176 Score = 90.1 bits (222), Expect = 2e-16 Identities = 41/54 (75%), Positives = 47/54 (87%) Frame = +3 Query: 3 LSILRRCKWDTQISTRASSLYHLIDIHGKTVASIVNKAEPFEAHLVLTPAWKED 164 LS L++CKWD +ISTRASSLYHLID+HGKTV SIVNKAEP EAHL LTP K++ Sbjct: 768 LSALKQCKWDAEISTRASSLYHLIDLHGKTVTSIVNKAEPLEAHLTLTPVKKDE 821