BLASTX nr result

ID: Dioscorea21_contig00013274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013274
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ85190.1| predicted protein [Hordeum vulgare subsp. vulgare]     82   6e-14
dbj|BAK04093.1| predicted protein [Hordeum vulgare subsp. vulgare]     77   1e-12
dbj|BAJ85093.1| predicted protein [Hordeum vulgare subsp. vulgare]     77   1e-12
ref|XP_003558968.1| PREDICTED: F-box protein At4g00755-like [Bra...    77   1e-12
ref|XP_003558967.1| PREDICTED: F-box protein At4g00755-like [Bra...    77   2e-12

>dbj|BAJ85190.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 432

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 39/76 (51%), Positives = 47/76 (61%)
 Frame = -3

Query: 278 QENTLQTFKLPRPFVCIXXXXXXXXXXXXXXXXEDNLYYICVCHVQVVGRLLGPVFDAEI 99
           QEN LQTFKLPRP +CI                 D+ YYICVCH QVVGR L PVF  +I
Sbjct: 241 QENKLQTFKLPRPVLCIGGVVKIELLGRVQKQATDDRYYICVCHAQVVGRSLSPVFMVDI 300

Query: 98  PDTMGNLVLKYFPDAR 51
            D+ GN +LK+ P+A+
Sbjct: 301 NDSGGNAILKHLPEAK 316


>dbj|BAK04093.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 360

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/76 (47%), Positives = 47/76 (61%)
 Frame = -3

Query: 278 QENTLQTFKLPRPFVCIXXXXXXXXXXXXXXXXEDNLYYICVCHVQVVGRLLGPVFDAEI 99
           Q+N LQ+FKLPRP +CI                 D++YYICVCHVQV+GR L P+F  +I
Sbjct: 240 QKNELQSFKLPRPALCIGGVLMIELLGRVQKQEADDMYYICVCHVQVLGRSLSPLFMVDI 299

Query: 98  PDTMGNLVLKYFPDAR 51
            D  G+ +LKY P A+
Sbjct: 300 SDPEGHSILKYLPGAK 315


>dbj|BAJ85093.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 397

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/76 (47%), Positives = 47/76 (61%)
 Frame = -3

Query: 278 QENTLQTFKLPRPFVCIXXXXXXXXXXXXXXXXEDNLYYICVCHVQVVGRLLGPVFDAEI 99
           Q+N LQ+FKLPRP +CI                 D++YYICVCHVQV+GR L P+F  +I
Sbjct: 240 QKNELQSFKLPRPALCIGGVLMIELLGRVQKQEADDMYYICVCHVQVLGRSLSPLFMVDI 299

Query: 98  PDTMGNLVLKYFPDAR 51
            D  G+ +LKY P A+
Sbjct: 300 SDPEGHSILKYLPGAK 315


>ref|XP_003558968.1| PREDICTED: F-box protein At4g00755-like [Brachypodium distachyon]
          Length = 386

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 38/76 (50%), Positives = 44/76 (57%)
 Frame = -3

Query: 278 QENTLQTFKLPRPFVCIXXXXXXXXXXXXXXXXEDNLYYICVCHVQVVGRLLGPVFDAEI 99
           QEN LQ+F+LPRP +CI                 D+ YYICVCH QVVGR L PVF  +I
Sbjct: 252 QENMLQSFRLPRPVLCIGGVVKIELLGRVQKQATDDKYYICVCHAQVVGRSLSPVFVVDI 311

Query: 98  PDTMGNLVLKYFPDAR 51
            D  G+ VLKY P  R
Sbjct: 312 ADAGGHAVLKYSPGVR 327


>ref|XP_003558967.1| PREDICTED: F-box protein At4g00755-like [Brachypodium distachyon]
          Length = 393

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/76 (48%), Positives = 43/76 (56%)
 Frame = -3

Query: 278 QENTLQTFKLPRPFVCIXXXXXXXXXXXXXXXXEDNLYYICVCHVQVVGRLLGPVFDAEI 99
           QEN LQ+F+LPRP +CI                 D+ YYICVCH QV+GR L PVF  +I
Sbjct: 248 QENMLQSFRLPRPVLCIGGVVKIELLGPVQKHAVDDKYYICVCHAQVIGRSLSPVFMVDI 307

Query: 98  PDTMGNLVLKYFPDAR 51
           PD     VLKY P  R
Sbjct: 308 PDPGSYAVLKYLPGVR 323


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