BLASTX nr result

ID: Dioscorea21_contig00013236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013236
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002455809.1| hypothetical protein SORBIDRAFT_03g025630 [S...    40   1e-06

>ref|XP_002455809.1| hypothetical protein SORBIDRAFT_03g025630 [Sorghum bicolor]
           gi|241927784|gb|EES00929.1| hypothetical protein
           SORBIDRAFT_03g025630 [Sorghum bicolor]
          Length = 681

 Score = 40.0 bits (92), Expect(2) = 1e-06
 Identities = 32/104 (30%), Positives = 40/104 (38%)
 Frame = +3

Query: 3   FRLKDDPPNCGDPNYELTCDHLNHTVLTLLFPNYYYITNITYHDFSFDYLSVYFFLQLKY 182
           FR   DPP CG   YEL+C     T+   +    Y++T+I Y D SF             
Sbjct: 56  FRRPGDPPECGVQAYELSCSRSKATI--RINTETYFVTSINYTDLSF------------- 100

Query: 183 VGMEKYNNINNVSCSHLPLPASPLTPSNLSRNKHYLAHYGSDGL 314
            G+   N   + SC   PLP     P     N  Y   Y   GL
Sbjct: 101 -GVVDANLDMHSSC---PLP----RPDQFRYNDDYTGSYLESGL 136



 Score = 38.1 bits (87), Expect(2) = 1e-06
 Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
 Frame = +2

Query: 308 WVTLVNCSKEVKDKSMRGHYKLFNRFNYDYYHNYWLVPCLSHNNSFMIYLID--GFKVRN 481
           W   +NCS+   + S                  Y  V CLS NNSF+  ++D     V +
Sbjct: 150 WACFINCSQSKTNSSW-----------------YKPVNCLSANNSFVYVMVDYSDCTVSS 192

Query: 482 LMPSCRFFAMFPDNNY 529
           L PSC + AM P  N+
Sbjct: 193 LEPSCGYLAMIPFGNW 208


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