BLASTX nr result

ID: Dioscorea21_contig00013216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00013216
         (1496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268...   225   2e-56
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu...   205   2e-50
ref|XP_002315647.1| predicted protein [Populus trichocarpa] gi|2...   177   8e-42
emb|CAN66828.1| hypothetical protein VITISV_015886 [Vitis vinifera]   172   2e-40
emb|CBI16834.3| unnamed protein product [Vitis vinifera]              162   2e-37

>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
            vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
            uncharacterized protein LOC100268141 isoform 2 [Vitis
            vinifera]
          Length = 647

 Score =  225 bits (574), Expect = 2e-56
 Identities = 125/225 (55%), Positives = 136/225 (60%), Gaps = 2/225 (0%)
 Frame = -1

Query: 1328 HPQGMMGAGFDPTFMXXXXXXXXXXXXXXXGMMPSFQAVNAVGLPGVAPHVNPAFFXXXX 1149
            HPQGMMG+GFDPT+M               GM+PSF AVN +GL GVAPHVNPAFF    
Sbjct: 421  HPQGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGVAPHVNPAFFGRGM 480

Query: 1148 XXXXXXXXXXXXXXXXXXXXMWGDASMGGWTGEEHGRRTRESSYDGDDVASDYGYGEVNH 969
                                 W D SMGGW GEEHGRRTRESSY GDD ASDYGYGEVNH
Sbjct: 481  AANGMGMMGATGMDGHHAGM-WTDTSMGGWGGEEHGRRTRESSYGGDDGASDYGYGEVNH 539

Query: 968  ERGGRSNT-SREKERGSERDWSGNSERRNRDEREQDWDRSDRD-RYKEEKXXXXXXXXXX 795
            E+ GRSNT SREKERGSERDWSGNSERR+RDEREQDW+RSD+D RY+EEK          
Sbjct: 540  EKVGRSNTASREKERGSERDWSGNSERRHRDEREQDWERSDKDHRYREEKDGYRDHRQRE 599

Query: 794  XXXXXXXXXXXXGXXXXXXXXXXXXXQEEDYRSRSRDADYGKRRR 660
                                       +ED+RSRSRD DYGKRRR
Sbjct: 600  RDFNNEDDWDRGQSSSRSRSRSRAVA-DEDHRSRSRDGDYGKRRR 643


>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
            gi|223546091|gb|EEF47594.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 644

 Score =  205 bits (522), Expect = 2e-50
 Identities = 120/227 (52%), Positives = 132/227 (58%), Gaps = 5/227 (2%)
 Frame = -1

Query: 1325 PQGMMGAGFDPTFMXXXXXXXXXXXXXXXGMMPSFQAVNAVGLPGVAPHVNPAFFXXXXX 1146
            PQ MM AGFDPT+M               GM+PSF AVNA+GL GVAPHVNPAFF     
Sbjct: 417  PQSMMRAGFDPTYMGRGAGYGGFAGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFGRGMA 476

Query: 1145 XXXXXXXXXXXXXXXXXXXMWGDASMGGWTGEEHGRRTRESSYDGDDVASDYGYGEVNHE 966
                                W D SMGGW GEE GRRTRESSY GDD AS+YGYGEVNHE
Sbjct: 477  PNGMGMMGPSGMDGPNAGM-WSDTSMGGW-GEEPGRRTRESSYGGDDGASEYGYGEVNHE 534

Query: 965  RGGRSN-TSREKERGSERDWSGNSERRNRDEREQDWDRSDRD----RYKEEKXXXXXXXX 801
            +G RS+  SREKER SERDWSGNS+RR+RD+RE DWDRS+R+    RY+EEK        
Sbjct: 535  KGARSSAASREKERASERDWSGNSDRRHRDDREHDWDRSEREHKEHRYREEK-ESYRDHR 593

Query: 800  XXXXXXXXXXXXXXGXXXXXXXXXXXXXQEEDYRSRSRDADYGKRRR 660
                          G              EEDYRSRSRDADYGKRRR
Sbjct: 594  QRERDSGYEDDWDRGQSSSRSRSRSRAVPEEDYRSRSRDADYGKRRR 640


>ref|XP_002315647.1| predicted protein [Populus trichocarpa] gi|222864687|gb|EEF01818.1|
            predicted protein [Populus trichocarpa]
          Length = 573

 Score =  177 bits (448), Expect = 8e-42
 Identities = 107/225 (47%), Positives = 123/225 (54%), Gaps = 2/225 (0%)
 Frame = -1

Query: 1328 HPQGMMGAGFDPTFMXXXXXXXXXXXXXXXGMMPSFQAVNAVGLPGVAPHVNPAFFXXXX 1149
            H QGMMGAGFDP +M               GM+PSF AVN++GL GVAPHVNPAFF    
Sbjct: 366  HHQGMMGAGFDPLYMGRGGGYGGFPGHGFPGMLPSFPAVNSMGLAGVAPHVNPAFFARGM 425

Query: 1148 XXXXXXXXXXXXXXXXXXXXMWGDASMGGWTGEEHGRRTRESSYDGDDVASDYGYGEVNH 969
                                  G  +  G  G   G+   ESSYDGD+ AS+YGYGE NH
Sbjct: 426  APNGM-----------------GMMASSGMEGPNPGK---ESSYDGDEGASEYGYGEGNH 465

Query: 968  ERGGRSN-TSREKERGSERDWSGNSERRNRDEREQDWDRSDRD-RYKEEKXXXXXXXXXX 795
            E+G RS+  SREKER SERDWSGNS+RR+RDEREQDWDRS+R+ +Y+EEK          
Sbjct: 466  EKGARSSGASREKERVSERDWSGNSDRRHRDEREQDWDRSEREPKYREEKDTYRGHRQRE 525

Query: 794  XXXXXXXXXXXXGXXXXXXXXXXXXXQEEDYRSRSRDADYGKRRR 660
                                       EEDYRSRSRD DYGKRRR
Sbjct: 526  RDSGYEDDRDRGHSSSRARSRSRAAP-EEDYRSRSRDVDYGKRRR 569


>emb|CAN66828.1| hypothetical protein VITISV_015886 [Vitis vinifera]
          Length = 168

 Score =  172 bits (437), Expect = 2e-40
 Identities = 91/144 (63%), Positives = 98/144 (68%), Gaps = 2/144 (1%)
 Frame = -1

Query: 1085 WGDASMGGWTGEEHGRRTRESSYDGDDVASDYGYGEVNHERGGRSNT-SREKERGSERDW 909
            W D SMGGW GEEHGRRTRESSY GDD ASDYGYGEVNHE+ GRSNT SREKERGSERDW
Sbjct: 22   WTDTSMGGWGGEEHGRRTRESSYGGDDGASDYGYGEVNHEKVGRSNTASREKERGSERDW 81

Query: 908  SGNSERRNRDEREQDWDRSDRD-RYKEEKXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXX 732
            SGNSERR+RDEREQDW+RSD+D RY+EEK                               
Sbjct: 82   SGNSERRHRDEREQDWERSDKDHRYREEKDGYRDHRQRERDFNNEDDWDRGQSSSRSRSR 141

Query: 731  XXXXXQEEDYRSRSRDADYGKRRR 660
                  +ED+RSRSRD DYGKRRR
Sbjct: 142  SRAVA-DEDHRSRSRDGDYGKRRR 164


>emb|CBI16834.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score =  162 bits (410), Expect = 2e-37
 Identities = 90/152 (59%), Positives = 99/152 (65%), Gaps = 2/152 (1%)
 Frame = -1

Query: 1328 HPQGMMGAGFDPTFMXXXXXXXXXXXXXXXGMMPSFQAVNAVGLPGVAPHVNPAFFXXXX 1149
            HPQGMMG+GFDPT+M               GM+PSF AVN +GL GVAPHVNPAFF    
Sbjct: 296  HPQGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGVAPHVNPAFFGR-- 353

Query: 1148 XXXXXXXXXXXXXXXXXXXXMWGDASMG-GWTGEEHGRRTRESSYDGDDVASDYGYGEVN 972
                                  G A+ G G  GEEHGRRTRESSY GDD ASDYGYGEVN
Sbjct: 354  ----------------------GMAANGMGMMGEEHGRRTRESSYGGDDGASDYGYGEVN 391

Query: 971  HERGGRSNT-SREKERGSERDWSGNSERRNRD 879
            HE+ GRSNT SREKERGSERDWSGNSERR+++
Sbjct: 392  HEKVGRSNTASREKERGSERDWSGNSERRHQE 423


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