BLASTX nr result
ID: Dioscorea21_contig00013216
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00013216 (1496 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268... 225 2e-56 ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu... 205 2e-50 ref|XP_002315647.1| predicted protein [Populus trichocarpa] gi|2... 177 8e-42 emb|CAN66828.1| hypothetical protein VITISV_015886 [Vitis vinifera] 172 2e-40 emb|CBI16834.3| unnamed protein product [Vitis vinifera] 162 2e-37 >ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED: uncharacterized protein LOC100268141 isoform 2 [Vitis vinifera] Length = 647 Score = 225 bits (574), Expect = 2e-56 Identities = 125/225 (55%), Positives = 136/225 (60%), Gaps = 2/225 (0%) Frame = -1 Query: 1328 HPQGMMGAGFDPTFMXXXXXXXXXXXXXXXGMMPSFQAVNAVGLPGVAPHVNPAFFXXXX 1149 HPQGMMG+GFDPT+M GM+PSF AVN +GL GVAPHVNPAFF Sbjct: 421 HPQGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGVAPHVNPAFFGRGM 480 Query: 1148 XXXXXXXXXXXXXXXXXXXXMWGDASMGGWTGEEHGRRTRESSYDGDDVASDYGYGEVNH 969 W D SMGGW GEEHGRRTRESSY GDD ASDYGYGEVNH Sbjct: 481 AANGMGMMGATGMDGHHAGM-WTDTSMGGWGGEEHGRRTRESSYGGDDGASDYGYGEVNH 539 Query: 968 ERGGRSNT-SREKERGSERDWSGNSERRNRDEREQDWDRSDRD-RYKEEKXXXXXXXXXX 795 E+ GRSNT SREKERGSERDWSGNSERR+RDEREQDW+RSD+D RY+EEK Sbjct: 540 EKVGRSNTASREKERGSERDWSGNSERRHRDEREQDWERSDKDHRYREEKDGYRDHRQRE 599 Query: 794 XXXXXXXXXXXXGXXXXXXXXXXXXXQEEDYRSRSRDADYGKRRR 660 +ED+RSRSRD DYGKRRR Sbjct: 600 RDFNNEDDWDRGQSSSRSRSRSRAVA-DEDHRSRSRDGDYGKRRR 643 >ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis] gi|223546091|gb|EEF47594.1| RNA binding protein, putative [Ricinus communis] Length = 644 Score = 205 bits (522), Expect = 2e-50 Identities = 120/227 (52%), Positives = 132/227 (58%), Gaps = 5/227 (2%) Frame = -1 Query: 1325 PQGMMGAGFDPTFMXXXXXXXXXXXXXXXGMMPSFQAVNAVGLPGVAPHVNPAFFXXXXX 1146 PQ MM AGFDPT+M GM+PSF AVNA+GL GVAPHVNPAFF Sbjct: 417 PQSMMRAGFDPTYMGRGAGYGGFAGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFGRGMA 476 Query: 1145 XXXXXXXXXXXXXXXXXXXMWGDASMGGWTGEEHGRRTRESSYDGDDVASDYGYGEVNHE 966 W D SMGGW GEE GRRTRESSY GDD AS+YGYGEVNHE Sbjct: 477 PNGMGMMGPSGMDGPNAGM-WSDTSMGGW-GEEPGRRTRESSYGGDDGASEYGYGEVNHE 534 Query: 965 RGGRSN-TSREKERGSERDWSGNSERRNRDEREQDWDRSDRD----RYKEEKXXXXXXXX 801 +G RS+ SREKER SERDWSGNS+RR+RD+RE DWDRS+R+ RY+EEK Sbjct: 535 KGARSSAASREKERASERDWSGNSDRRHRDDREHDWDRSEREHKEHRYREEK-ESYRDHR 593 Query: 800 XXXXXXXXXXXXXXGXXXXXXXXXXXXXQEEDYRSRSRDADYGKRRR 660 G EEDYRSRSRDADYGKRRR Sbjct: 594 QRERDSGYEDDWDRGQSSSRSRSRSRAVPEEDYRSRSRDADYGKRRR 640 >ref|XP_002315647.1| predicted protein [Populus trichocarpa] gi|222864687|gb|EEF01818.1| predicted protein [Populus trichocarpa] Length = 573 Score = 177 bits (448), Expect = 8e-42 Identities = 107/225 (47%), Positives = 123/225 (54%), Gaps = 2/225 (0%) Frame = -1 Query: 1328 HPQGMMGAGFDPTFMXXXXXXXXXXXXXXXGMMPSFQAVNAVGLPGVAPHVNPAFFXXXX 1149 H QGMMGAGFDP +M GM+PSF AVN++GL GVAPHVNPAFF Sbjct: 366 HHQGMMGAGFDPLYMGRGGGYGGFPGHGFPGMLPSFPAVNSMGLAGVAPHVNPAFFARGM 425 Query: 1148 XXXXXXXXXXXXXXXXXXXXMWGDASMGGWTGEEHGRRTRESSYDGDDVASDYGYGEVNH 969 G + G G G+ ESSYDGD+ AS+YGYGE NH Sbjct: 426 APNGM-----------------GMMASSGMEGPNPGK---ESSYDGDEGASEYGYGEGNH 465 Query: 968 ERGGRSN-TSREKERGSERDWSGNSERRNRDEREQDWDRSDRD-RYKEEKXXXXXXXXXX 795 E+G RS+ SREKER SERDWSGNS+RR+RDEREQDWDRS+R+ +Y+EEK Sbjct: 466 EKGARSSGASREKERVSERDWSGNSDRRHRDEREQDWDRSEREPKYREEKDTYRGHRQRE 525 Query: 794 XXXXXXXXXXXXGXXXXXXXXXXXXXQEEDYRSRSRDADYGKRRR 660 EEDYRSRSRD DYGKRRR Sbjct: 526 RDSGYEDDRDRGHSSSRARSRSRAAP-EEDYRSRSRDVDYGKRRR 569 >emb|CAN66828.1| hypothetical protein VITISV_015886 [Vitis vinifera] Length = 168 Score = 172 bits (437), Expect = 2e-40 Identities = 91/144 (63%), Positives = 98/144 (68%), Gaps = 2/144 (1%) Frame = -1 Query: 1085 WGDASMGGWTGEEHGRRTRESSYDGDDVASDYGYGEVNHERGGRSNT-SREKERGSERDW 909 W D SMGGW GEEHGRRTRESSY GDD ASDYGYGEVNHE+ GRSNT SREKERGSERDW Sbjct: 22 WTDTSMGGWGGEEHGRRTRESSYGGDDGASDYGYGEVNHEKVGRSNTASREKERGSERDW 81 Query: 908 SGNSERRNRDEREQDWDRSDRD-RYKEEKXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXX 732 SGNSERR+RDEREQDW+RSD+D RY+EEK Sbjct: 82 SGNSERRHRDEREQDWERSDKDHRYREEKDGYRDHRQRERDFNNEDDWDRGQSSSRSRSR 141 Query: 731 XXXXXQEEDYRSRSRDADYGKRRR 660 +ED+RSRSRD DYGKRRR Sbjct: 142 SRAVA-DEDHRSRSRDGDYGKRRR 164 >emb|CBI16834.3| unnamed protein product [Vitis vinifera] Length = 491 Score = 162 bits (410), Expect = 2e-37 Identities = 90/152 (59%), Positives = 99/152 (65%), Gaps = 2/152 (1%) Frame = -1 Query: 1328 HPQGMMGAGFDPTFMXXXXXXXXXXXXXXXGMMPSFQAVNAVGLPGVAPHVNPAFFXXXX 1149 HPQGMMG+GFDPT+M GM+PSF AVN +GL GVAPHVNPAFF Sbjct: 296 HPQGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGVAPHVNPAFFGR-- 353 Query: 1148 XXXXXXXXXXXXXXXXXXXXMWGDASMG-GWTGEEHGRRTRESSYDGDDVASDYGYGEVN 972 G A+ G G GEEHGRRTRESSY GDD ASDYGYGEVN Sbjct: 354 ----------------------GMAANGMGMMGEEHGRRTRESSYGGDDGASDYGYGEVN 391 Query: 971 HERGGRSNT-SREKERGSERDWSGNSERRNRD 879 HE+ GRSNT SREKERGSERDWSGNSERR+++ Sbjct: 392 HEKVGRSNTASREKERGSERDWSGNSERRHQE 423