BLASTX nr result
ID: Dioscorea21_contig00013215
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00013215
(1375 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002454320.1| hypothetical protein SORBIDRAFT_04g028630 [S... 503 e-150
gb|AAR91037.1| RNA-directed RNA polymerase 2 [Hordeum vulgare su... 494 e-147
gb|ACH53361.1| RNA-directed RNA polymerase 1b [Hordeum vulgare] 492 e-147
gb|ACH53360.1| RNA-directed RNA polymerase 1a [Hordeum vulgare] 494 e-147
gb|AAR91036.1| RNA-directed RNA polymerase 1 [Hordeum vulgare su... 488 e-146
>ref|XP_002454320.1| hypothetical protein SORBIDRAFT_04g028630 [Sorghum bicolor]
gi|241934151|gb|EES07296.1| hypothetical protein
SORBIDRAFT_04g028630 [Sorghum bicolor]
Length = 1114
Score = 503 bits (1296), Expect(2) = e-150
Identities = 253/397 (63%), Positives = 305/397 (76%), Gaps = 4/397 (1%)
Frame = +1
Query: 196 REKFLLIQVQAAPRIYEGPEQNSGSLYEDPRLNYFKDLPDHQWIRTTDFTPFCSIGQSSA 375
R KFLLIQVQAAP+IYE + G +YEDP N+F D D QW RT DFTP SIGQSS
Sbjct: 171 RTKFLLIQVQAAPKIYELLPRRPGLMYEDPFFNWFMDDTDEQWTRTIDFTPSVSIGQSSI 230
Query: 376 FCLQLPNGCTLPNIGEHFVCYKEVDGPFHLPRGSSFSRSLDLVPIVEPCSGIELPYKILF 555
FCL++P C LP IG++FV YKE + F G S+S LVPIV+ IE+PY+ILF
Sbjct: 231 FCLEVPQQCELPRIGDYFVYYKERNLDFECRNGYSYSCGNCLVPIVKSPDYIEVPYEILF 290
Query: 556 KINHMIQKGTLMGPALDDEFYRLVSPCFKPMDHIERALEDMSYLKSSCLNPANWLYEKYQ 735
KINH++Q GTL GP +D F+ VSP F+P+DHI+RAL MSYLKS+CLNP NWL +Y
Sbjct: 291 KINHLVQNGTLSGPTVDHSFFCHVSPEFEPIDHIKRALLKMSYLKSTCLNPTNWLSVQYS 350
Query: 736 EFQTSKH-DTKSSMISLNSGLVYVHRVQVTPSKVNFYGPEINVSNRVIRHFSEDIDNFMR 912
+ S+H +SS ISL+ GLVYVHRVQVTP+KV FYGPEINVSNRV+R+FS DIDNF+R
Sbjct: 351 RIRRSRHASQRSSNISLDDGLVYVHRVQVTPAKVYFYGPEINVSNRVVRNFSADIDNFLR 410
Query: 913 FSFVDEDCEKMRSTDLSP---SSDNEKRTAIYKRILSTMRNGISIGDKKFEFLAYSSSQL 1083
SFVDEDCEK+RS DLSP S ++ +RTA+Y R+LS + NGI+IGDK FEFLA+SSSQL
Sbjct: 411 ISFVDEDCEKLRSLDLSPRSTSGNDARRTALYNRVLSVLSNGINIGDKHFEFLAFSSSQL 470
Query: 1084 RENSAWMFASRPGLAAADVREWLGDFRKIRNVAKYAARLGQSFSSSTETLTVYRDEVEVI 1263
R+NSAWMFASR GL A+D+R+W+GDFR IRNVAKYAARLGQSFSSSTETL V + EVE I
Sbjct: 471 RDNSAWMFASRQGLTASDIRKWMGDFRDIRNVAKYAARLGQSFSSSTETLIVRKHEVEQI 530
Query: 1264 HDVENSAGYVFSDGIGKISPEFARAVAKKCRIRTSTP 1374
D++N Y+FSDG+GKIS FA+ VA KC++R P
Sbjct: 531 PDIKNGTNYIFSDGVGKISANFAKEVAMKCKLRRFAP 567
Score = 55.8 bits (133), Expect(2) = e-150
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = +2
Query: 2 GCPISSEEFSVLWSFDSVRVDFGVNLKKIHFFISSESQSYKLELSHKSIWEIKLLR 169
GC + S L++ +V V FG ++KKI+F++S YKLELS++SIWEI+L R
Sbjct: 109 GCLVKENILSALFTASNVSVQFGFDMKKIYFYLSYNFIKYKLELSYESIWEIQLHR 164
>gb|AAR91037.1| RNA-directed RNA polymerase 2 [Hordeum vulgare subsp. vulgare]
Length = 1115
Score = 494 bits (1273), Expect(2) = e-147
Identities = 246/397 (61%), Positives = 307/397 (77%), Gaps = 4/397 (1%)
Frame = +1
Query: 196 REKFLLIQVQAAPRIYEGPEQNSGSLYEDPRLNYFKDLPDHQWIRTTDFTPFCSIGQSSA 375
++KFLLIQV AAP+IYE +SGS+Y+DP NYF+D D QW RTTDFTP SIGQS
Sbjct: 169 QKKFLLIQVMAAPKIYEQNLWHSGSMYDDPLFNYFRDDTDDQWTRTTDFTPLASIGQSYI 228
Query: 376 FCLQLPNGCTLPNIGEHFVCYKEVDGPFHLPRGSSFSRSLDLVPIVEPCSGIELPYKILF 555
CL+LP C LPNI E+FV YK + FH RG S+S + VPIV+ ++PY+ILF
Sbjct: 229 LCLELPADCYLPNIREYFVYYKNHNHDFHCMRGHSYSSNSCFVPIVKSQYFTDVPYEILF 288
Query: 556 KINHMIQKGTLMGPALDDEFYRLVSPCFKPMDHIERALEDMSYLKSSCLNPANWLYEKYQ 735
KIN+++Q G L GP LDD FY LVSP + +DHI+ ALE+MSYLK +CLNP NWL EKY+
Sbjct: 289 KINNLVQNGILSGPTLDDNFYSLVSPGYVCIDHIKHALENMSYLKKTCLNPINWLSEKYK 348
Query: 736 EFQTSKHDTKSSMISL-NSGLVYVHRVQVTPSKVNFYGPEINVSNRVIRHFSEDIDNFMR 912
E Q S+H S I+L + GL YV+RVQ+TP+KV FYGPEINVSNRV+R++S D++NF+R
Sbjct: 349 EIQISRHMLTSPNIALDDDGLAYVYRVQITPAKVYFYGPEINVSNRVVRNYSADLENFLR 408
Query: 913 FSFVDEDCEKMRSTDLSPSS---DNEKRTAIYKRILSTMRNGISIGDKKFEFLAYSSSQL 1083
SFVDEDCEK+RSTDLSP S +N RTA+Y RILS + NGI+IG+K FEFLA+SSSQL
Sbjct: 409 ISFVDEDCEKLRSTDLSPRSAPGNNASRTALYNRILSVLSNGITIGNKHFEFLAFSSSQL 468
Query: 1084 RENSAWMFASRPGLAAADVREWLGDFRKIRNVAKYAARLGQSFSSSTETLTVYRDEVEVI 1263
R+NSAWMFASR GL+A+D+REW+G+FR IRNVAKYAARLGQSFS+STETL V++ EV+ +
Sbjct: 469 RDNSAWMFASRTGLSASDIREWMGNFRNIRNVAKYAARLGQSFSASTETLKVHKYEVQAL 528
Query: 1264 HDVENSAGYVFSDGIGKISPEFARAVAKKCRIRTSTP 1374
+V N YVFSDGIG IS +FA V++KC++ TP
Sbjct: 529 PEVTNGTKYVFSDGIGTISADFADEVSRKCKLARFTP 565
Score = 57.0 bits (136), Expect(2) = e-147
Identities = 27/54 (50%), Positives = 36/54 (66%)
Frame = +2
Query: 2 GCPISSEEFSVLWSFDSVRVDFGVNLKKIHFFISSESQSYKLELSHKSIWEIKL 163
GC + SVLWS V V+FG +KKI F ++ + YKLELS++SIWEI+L
Sbjct: 109 GCLLRERVLSVLWSGTGVSVEFGFAMKKIDFCLTYNLKKYKLELSYESIWEIQL 162
>gb|ACH53361.1| RNA-directed RNA polymerase 1b [Hordeum vulgare]
Length = 1115
Score = 492 bits (1267), Expect(2) = e-147
Identities = 244/396 (61%), Positives = 309/396 (78%), Gaps = 3/396 (0%)
Frame = +1
Query: 196 REKFLLIQVQAAPRIYEGPEQNSGSLYEDPRLNYFKDLPDHQWIRTTDFTPFCSIGQSSA 375
++KFLLIQVQAAP+IYE + SGS+Y+DP NYF+D D QW RTTDFTP SIGQS
Sbjct: 169 QKKFLLIQVQAAPKIYEQNIRLSGSMYDDPLFNYFRDDTDDQWTRTTDFTPSASIGQSYI 228
Query: 376 FCLQLPNGCTLPNIGEHFVCYKEVDGPFHLPRGSSFSRSLDLVPIVEPCSGIELPYKILF 555
CL+LP+ C LPNI E+FV Y+ + F+L G S+S + VP+V+ ++PY+ILF
Sbjct: 229 LCLELPHICYLPNIREYFVYYEVHNDIFNLQPGYSYSSNTCFVPVVKSHYFTDVPYEILF 288
Query: 556 KINHMIQKGTLMGPALDDEFYRLVSPCFKPMDHIERALEDMSYLKSSCLNPANWLYEKYQ 735
KINH++Q GTL GP LDD FYRLVSP ++ +D I+RALE MSYLK +CLNP NWL E+Y+
Sbjct: 289 KINHLVQNGTLSGPTLDDNFYRLVSPGYERIDRIKRALEKMSYLKKTCLNPTNWLSEQYK 348
Query: 736 EFQTSKHDTKSSMISLNSGLVYVHRVQVTPSKVNFYGPEINVSNRVIRHFSEDIDNFMRF 915
+ + S+ T ++ + GLVYV+RVQ+TP+KV FYGPEINVSNRV+R+++ D+DNF+R
Sbjct: 349 KMRRSRVLTSPNITLDDDGLVYVYRVQITPAKVYFYGPEINVSNRVVRNYAADLDNFLRI 408
Query: 916 SFVDEDCEKMRSTDLSPSS---DNEKRTAIYKRILSTMRNGISIGDKKFEFLAYSSSQLR 1086
SFVDEDCEK+RSTDLS S +N +RTA+Y R+LS + NGI+IGDK F+FLA+SSSQLR
Sbjct: 409 SFVDEDCEKLRSTDLSQRSAPGNNTRRTALYNRVLSVLSNGITIGDKHFDFLAFSSSQLR 468
Query: 1087 ENSAWMFASRPGLAAADVREWLGDFRKIRNVAKYAARLGQSFSSSTETLTVYRDEVEVIH 1266
+NSAWMFASRPGL+A+D+REW+G+FR IRNVAKYAARLGQSFSSSTETL V++ EV+
Sbjct: 469 DNSAWMFASRPGLSASDIREWMGNFRNIRNVAKYAARLGQSFSSSTETLKVHKYEVKEAP 528
Query: 1267 DVENSAGYVFSDGIGKISPEFARAVAKKCRIRTSTP 1374
DV N YVFSDGIG IS +FA V+KKC + TP
Sbjct: 529 DVTNGTEYVFSDGIGTISADFADEVSKKCNLTRFTP 564
Score = 58.5 bits (140), Expect(2) = e-147
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +2
Query: 2 GCPISSEEFSVLWSFDSVRVDFGVNLKKIHFFISSESQSYKLELSHKSIWEIKLLR 169
GC + SVLWS +V V+FG +K+I F + S+ YKLELS++SIWEI+L R
Sbjct: 109 GCLLKERVLSVLWSGTNVSVEFGFAMKRIDFCLIYNSKKYKLELSYESIWEIQLHR 164
>gb|ACH53360.1| RNA-directed RNA polymerase 1a [Hordeum vulgare]
Length = 1114
Score = 494 bits (1271), Expect(2) = e-147
Identities = 245/397 (61%), Positives = 306/397 (77%), Gaps = 4/397 (1%)
Frame = +1
Query: 196 REKFLLIQVQAAPRIYEGPEQNSGSLYEDPRLNYFKDLPDHQWIRTTDFTPFCSIGQSSA 375
++KFLLIQV AAP+IYE +SGS+Y+DP NYF+D D QW RTTDFTP SIGQS
Sbjct: 169 QKKFLLIQVMAAPKIYEQNLWHSGSMYDDPLFNYFRDDTDDQWTRTTDFTPLASIGQSYI 228
Query: 376 FCLQLPNGCTLPNIGEHFVCYKEVDGPFHLPRGSSFSRSLDLVPIVEPCSGIELPYKILF 555
CL+LP C LPNI E+F YK + FH RG S+S + VPIV+ ++PY+ILF
Sbjct: 229 LCLELPADCYLPNIREYFAYYKNHNHDFHCMRGHSYSSNSCFVPIVKSQYFTDVPYEILF 288
Query: 556 KINHMIQKGTLMGPALDDEFYRLVSPCFKPMDHIERALEDMSYLKSSCLNPANWLYEKYQ 735
KIN+++Q G L GP LDD FYRLVSP + +DHI+ ALE+MSYLK +CLNP NWL EKY+
Sbjct: 289 KINNLVQNGILSGPTLDDNFYRLVSPGYVCIDHIKHALENMSYLKKTCLNPINWLSEKYK 348
Query: 736 EFQTSKHDTKSSMISL-NSGLVYVHRVQVTPSKVNFYGPEINVSNRVIRHFSEDIDNFMR 912
E Q S+H S I+L + GL YV+RVQ+TP+KV FYGPEINVSNRV+R++S D++NF+R
Sbjct: 349 EIQISRHMLTSPNIALDDDGLAYVYRVQITPAKVYFYGPEINVSNRVVRNYSADLENFLR 408
Query: 913 FSFVDEDCEKMRSTDLSP---SSDNEKRTAIYKRILSTMRNGISIGDKKFEFLAYSSSQL 1083
SFVDEDCEK+RSTDLSP +N RTA+Y RILS + NGI+IG+K FEFLA+SSSQL
Sbjct: 409 ISFVDEDCEKLRSTDLSPRYAPGNNASRTALYNRILSVLSNGITIGNKHFEFLAFSSSQL 468
Query: 1084 RENSAWMFASRPGLAAADVREWLGDFRKIRNVAKYAARLGQSFSSSTETLTVYRDEVEVI 1263
R+NSAWMFASR GL+A+D+REW+G+FR IRNVAKYAARLGQSFS+STETL V++ EV+ +
Sbjct: 469 RDNSAWMFASRTGLSASDIREWMGNFRNIRNVAKYAARLGQSFSASTETLKVHKYEVQAL 528
Query: 1264 HDVENSAGYVFSDGIGKISPEFARAVAKKCRIRTSTP 1374
+V N YVFSDGIG IS +FA V++KC++ TP
Sbjct: 529 PEVTNGTKYVFSDGIGTISADFADEVSRKCKLARFTP 565
Score = 57.0 bits (136), Expect(2) = e-147
Identities = 27/54 (50%), Positives = 36/54 (66%)
Frame = +2
Query: 2 GCPISSEEFSVLWSFDSVRVDFGVNLKKIHFFISSESQSYKLELSHKSIWEIKL 163
GC + SVLWS V V+FG +KKI F ++ + YKLELS++SIWEI+L
Sbjct: 109 GCLLRERVLSVLWSGTGVSVEFGFAMKKIDFCLTYNLKKYKLELSYESIWEIQL 162
>gb|AAR91036.1| RNA-directed RNA polymerase 1 [Hordeum vulgare subsp. vulgare]
Length = 1115
Score = 488 bits (1257), Expect(2) = e-146
Identities = 243/396 (61%), Positives = 308/396 (77%), Gaps = 3/396 (0%)
Frame = +1
Query: 196 REKFLLIQVQAAPRIYEGPEQNSGSLYEDPRLNYFKDLPDHQWIRTTDFTPFCSIGQSSA 375
++KFLLIQVQAAP+IYE + SGS+Y+DP NYF+D D QW RTTDFTP SIGQS
Sbjct: 169 QKKFLLIQVQAAPKIYEQNIRLSGSMYDDPLFNYFRDDTDDQWTRTTDFTPSASIGQSYI 228
Query: 376 FCLQLPNGCTLPNIGEHFVCYKEVDGPFHLPRGSSFSRSLDLVPIVEPCSGIELPYKILF 555
L+LP+ C LPNI E+FV Y+ + F+L G S+S + VP+V+ ++PY+ILF
Sbjct: 229 LSLELPHICYLPNIREYFVYYEVHNDIFNLQPGYSYSSNTCFVPVVKSHYFTDVPYEILF 288
Query: 556 KINHMIQKGTLMGPALDDEFYRLVSPCFKPMDHIERALEDMSYLKSSCLNPANWLYEKYQ 735
KINH++Q GTL GP LDD FYRLVSP ++ +D I+RALE MSYLK +CLNP NWL E+Y+
Sbjct: 289 KINHLVQNGTLSGPTLDDNFYRLVSPGYERIDRIKRALEKMSYLKKTCLNPTNWLSEQYK 348
Query: 736 EFQTSKHDTKSSMISLNSGLVYVHRVQVTPSKVNFYGPEINVSNRVIRHFSEDIDNFMRF 915
+ + S+ T ++ + GLVYV+RVQ+TP+KV FYGPEINVSNRV+R+++ D+DNF+R
Sbjct: 349 KMRRSRVLTSPNITLDDDGLVYVYRVQITPAKVYFYGPEINVSNRVVRNYAADLDNFLRI 408
Query: 916 SFVDEDCEKMRSTDLSPSS---DNEKRTAIYKRILSTMRNGISIGDKKFEFLAYSSSQLR 1086
SFVDEDCEK+RSTDLS S +N +RTA+Y R+LS + NGI+IGDK F+FLA+SSSQLR
Sbjct: 409 SFVDEDCEKLRSTDLSQRSAPGNNTRRTALYNRVLSVLSNGITIGDKHFDFLAFSSSQLR 468
Query: 1087 ENSAWMFASRPGLAAADVREWLGDFRKIRNVAKYAARLGQSFSSSTETLTVYRDEVEVIH 1266
+NSAWMFASRPGL+A+D+REW+G+FR IRNVAKYAARLGQSFSSSTETL V++ EV+
Sbjct: 469 DNSAWMFASRPGLSASDIREWMGNFRNIRNVAKYAARLGQSFSSSTETLKVHKYEVKEAP 528
Query: 1267 DVENSAGYVFSDGIGKISPEFARAVAKKCRIRTSTP 1374
DV N YVFSDGIG IS +FA V+KKC + TP
Sbjct: 529 DVTNGTEYVFSDGIGTISADFADEVSKKCNLTRFTP 564
Score = 58.2 bits (139), Expect(2) = e-146
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +2
Query: 2 GCPISSEEFSVLWSFDSVRVDFGVNLKKIHFFISSESQSYKLELSHKSIWEIKLLR 169
GC + SVLWS V V+FG +K+I F + S+ YKLELS++SIWEI+L R
Sbjct: 109 GCLLKERVLSVLWSGTDVSVEFGFAMKRIDFCLIYNSKKYKLELSYESIWEIQLHR 164